version 1.0
Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 230 64.61 0 254757..255533 + 258 190889869 deoC RHECIAT_CH0000238 - deoxyribose-phosphate aldolase protein 231 65.67 +1 255535..256842 + 435 190889870 deoA RHECIAT_CH0000239 - thymidine phosphorylase protein 232 62.73 0 256849..257382 - 177 190889871 - RHECIAT_CH0000240 - hypothetical protein 233 62.22 0 257547..258176 - 209 190889872 upp RHECIAT_CH0000241 - uracil phosphoribosyltransferase protein 234 62.64 0 258307..259275 - 322 190889873 add RHECIAT_CH0000242 - adenosine deaminase protein 235 64.41 0 259272..260555 - 427 190889874 deoB RHECIAT_CH0000243 - phosphopentomutase protein 236 62.20 0 260601..261182 - 193 190889875 - RHECIAT_CH0000244 - hypothetical protein 237 58.33 -1 261182..261817 - 211 190889876 - RHECIAT_CH0000245 - hypothetical protein 238 61.80 0 261929..262339 - 136 190889877 pilQ RHECIAT_CH0000246 - pilus subunit transmembrane protein 239 58.06 -1 262719..262904 + 61 190889878 pilA RHECIAT_CH0000247 - pilus subunit protein 240 58.28 -1 263029..263541 + 170 190889879 cpaA RHECIAT_CH0000248 - prepilin peptidase protein 241 63.97 0 263652..264467 + 271 190889880 cpaB RHECIAT_CH0000249 - pilus assembly protein 242 62.60 0 264480..265979 + 499 190889881 cpaC RHECIAT_CH0000250 - pilus assembly secretion protein 243 63.24 0 265976..266734 + 252 190889882 cpaD RHECIAT_CH0000251 - pilus assembly protein 244 62.52 0 266749..268026 + 425 190889883 cpaE RHECIAT_CH0000252 - pilus assembly, two-component response regulator protein 245 62.61 0 268049..269527 + 492 190889884 cpaF RHECIAT_CH0000253 - pilus assembly secretion ATP-binding protein 246 60.12 0 269532..270539 + 335 190889885 - RHECIAT_CH0000254 - probable pilus assembly protein 247 63.93 0 270554..271540 + 328 190889886 tadC RHECIAT_CH0000255 - pilus component protein 248 63.82 0 271663..272295 + 210 190889887 - RHECIAT_CH0000256 - probable amino acid efflux protein, LysE family 249 64.40 0 272333..273172 - 279 190889888 - RHECIAT_CH0000257 - putative pilus assembly protein (contains TPR repeats) 250 64.15 0 273315..274706 + 463 190889889 - RHECIAT_CH0000258 - probable leucyl aminopeptidase protein 251 64.67 0 274943..275293 + 116 190889890 - RHECIAT_CH0000259 - probable transcriptional regulator protein, MarR family 252 63.40 0 275317..276174 + 285 190889891 - RHECIAT_CH0000260 - putative endopeptidase-related protein 253 66.02 +1 276167..277558 - 463 190889892 gatA1 RHECIAT_CH0000261 - glutamyl-tRNA amidotransferase protein, A subunit 254 65.28 0 277594..278457 - 287 190889893 - RHECIAT_CH0000262 - probable ABC transporter, permease protein 255 64.45 0 278460..279407 - 315 190889894 - RHECIAT_CH0000263 - probable ABC transporter, permease protein 256 62.48 0 279717..281246 - 509 190889895 - RHECIAT_CH0000264 - probable ABC transporter, substrate-binding protein 257 68.13 +1 281364..282389 - 341 190889896 - RHECIAT_CH0000265 - putative peptidase protein 258 57.61 -1 282473..282748 - 91 190889897 - RHECIAT_CH0000266 - hypothetical protein 259 65.06 0 283188..286115 - 975 190889898 - RHECIAT_CH0000267 - probable aminotransferase protein 260 60.79 0 286236..287120 - 294 190889899 purUch1 RHECIAT_CH0000268 - formyltetrahydrofolate deformylase protein 261 61.85 0 287338..288354 - 338 190889900 exoZ RHECIAT_CH0000269 - exopolysaccharide production protein 262 57.30 -1 288411..289691 - 426 190889901 - RHECIAT_CH0000270 - probable polysaccharide biosynthesis protein 263 64.48 0 289694..290743 - 349 190889902 - RHECIAT_CH0000271 - probable carboxymethyl cellulase protein 264 66.05 +1 290880..292490 + 536 190889903 - RHECIAT_CH0000272 - probable succinoglycan biosynthesis transport protein 265 59.90 0 292487..292885 + 132 190889904 - RHECIAT_CH0000273 - hypothetical protein 266 59.14 0 293073..293537 - 154 190889905 - RHECIAT_CH0000274 - hypothetical protein 267 64.76 0 293914..294333 + 139 190889906 - RHECIAT_CH0000276 - hypothetical protein 268 65.31 +1 294336..294629 - 97 190889907 - RHECIAT_CH0000277 - hypothetical protein 269 67.34 +1 294756..295493 + 245 190889908 - RHECIAT_CH0000278 - probable glutamine amidotransferase protein 270 66.13 +1 295505..296062 + 185 190889909 nodL RHECIAT_CH0000279 - maltose O-acetyltransferase protein 271 61.59 0 296135..296587 + 150 190889910 - RHECIAT_CH0000280 - putative glutathione-dependent formaldehyde-activating protein 272 53.67 -2 296590..296889 - 99 190889911 - RHECIAT_CH0000281 - hypothetical protein 273 57.14 -1 296889..297119 - 76 190889912 - RHECIAT_CH0000282 - hypothetical protein 274 62.19 0 297178..299010 - 610 190889913 lepA RHECIAT_CH0000283 - GTP-binding elongation factor protein 275 63.95 0 299088..299786 - 232 190889914 - RHECIAT_CH0000284 - probable transcriptional activator regulator protein, TenA family 276 67.72 +1 299921..300490 + 189 190889915 - RHECIAT_CH0000285 - probable transcriptional regulator protein, LacI family 277 66.09 +1 300515..301030 + 171 190889916 - RHECIAT_CH0000286 - probable acetyltransferase protein 278 64.54 0 301046..301657 - 203 190889917 - RHECIAT_CH0000287 - putative haloacid dehydrogenase hydrolase protein 279 64.62 0 301791..302816 + 341 190889918 aphA RHECIAT_CH0000288 - acetylpolyamine aminohydrolase protein 280 61.78 0 302826..303377 + 183 190889919 recX RHECIAT_CH0000289 - DNA repair transcriptional regulator protein 281 63.99 0 303470..304366 + 298 190889920 - RHECIAT_CH0000290 - probable permease protein 282 66.45 +1 304481..304948 - 155 190889921 - RHECIAT_CH0000291 - hypothetical protein 283 61.59 0 305226..306209 + 327 190889922 - RHECIAT_CH0000292 - hypothetical protein 284 62.57 0 308237..308749 - 170 190889923 - RHECIAT_CH0000293 - putative transglutaminase-like cysteine peptidase protein 285 64.50 0 308983..309813 - 276 190889924 - RHECIAT_CH0000294 - putative hydrolase protein 286 57.00 -1 310022..310528 + 168 190889925 infC RHECIAT_CH0000295 - translation initiation factor IF-3 protein 287 59.26 0 310650..310838 - 62 190889926 - RHECIAT_CH0000296 - hypothetical protein 288 56.37 -1 310840..311043 + 67 190889927 rpmI RHECIAT_CH0000297 - 50S ribosomal protein L35 289 61.98 0 311082..311486 + 134 190889928 rplT RHECIAT_CH0000298 - 50S ribosomal protein L20 290 62.33 0 311634..312716 + 360 190889929 pheS RHECIAT_CH0000299 - phenylalanyl-tRNA synthetase protein, alpha subunit 291 64.15 0 312733..315156 + 807 190889930 pheT RHECIAT_CH0000300 - phenylalanyl-tRNA synthetase protein, beta subunit 292 56.94 -1 315210..315569 - 119 190889931 - RHECIAT_CH0000301 - hypothetical protein 293 65.56 +1 315660..316655 - 331 190889932 - RHECIAT_CH0000302 - probable oxidoreductase protein, aldo/keto reductase family 294 62.16 0 316836..317744 + 302 190889933 - RHECIAT_CH0000303 - probable transcriptional regulator protein, LysR family 295 60.84 0 317771..318268 - 165 190889934 - RHECIAT_CH0000304 - hypothetical protein 296 60.36 0 318414..319031 + 205 190889935 - RHECIAT_CH0000305 - hypothetical protein 297 62.61 0 319021..319464 - 147 190889936 - RHECIAT_CH0000306 - putative acetyltransferase protein 298 62.10 0 319461..320423 - 320 190889937 - RHECIAT_CH0000307 - putative oxidoreductase protein 299 60.59 0 320659..321645 + 328 190889938 - RHECIAT_CH0000308 - probable oxidoreductase protein 300 64.80 0 321649..322023 - 124 190889939 - RHECIAT_CH0000309 - hypothetical conserved membrane protein 301 64.29 0 322020..323027 - 335 190889940 - RHECIAT_CH0000310 - probable glycosyltransferase protein 302 64.50 0 323186..325033 + 615 190889941 - RHECIAT_CH0000311 - hypothetical protein 303 60.94 0 325062..325358 - 98 190889942 - RHECIAT_CH0000312 - hypothetical protein 304 66.10 +1 325591..327171 + 526 190889943 xseA RHECIAT_CH0000313 - exodeoxyribonuclease VII protein, large subunit 305 63.45 0 327174..327764 + 196 190889944 - RHECIAT_CH0000314 - probable NAD(P)H dehydrogenase (quinone) protein 306 62.25 0 327765..328262 - 165 190889945 - RHECIAT_CH0000315 - probable transcriptional regulator protein, MarR family 307 67.00 +1 328346..329257 + 303 190889946 - RHECIAT_CH0000316 - putative transporter, permease protein 308 62.20 0 329205..330458 - 417 190889947 - RHECIAT_CH0000317 - probable aminopeptidase protein 309 61.26 0 330589..331272 - 227 190889948 gstch1 RHECIAT_CH0000318 - glutathione S-transferase protein 310 62.16 0 331383..331826 + 147 190889949 - RHECIAT_CH0000319 - putative transcriptional regulator protein, MarR family 311 66.03 +1 331827..332300 - 157 190889950 - RHECIAT_CH0000320 - hypothetical protein 312 59.83 0 332311..332661 - 116 190889951 - RHECIAT_CH0000321 - probable arsenate reductase protein 313 63.94 0 332752..333813 - 353 190889952 - RHECIAT_CH0000322 - putative arginine catabolism protein 314 67.91 +1 334184..334747 + 187 190889953 - RHECIAT_CH0000323 - probable methylated-DNA-[protein]-cysteine S-methyltransferase protein 315 65.17 0 334782..335516 - 244 190889954 - RHECIAT_CH0000324 - putative short-chain dehydrogenase/oxidoreductase protein 316 62.78 0 335540..335719 + 59 190889955 - RHECIAT_CH0000325 - hypothetical protein 317 59.54 0 335729..336079 - 116 190889956 - RHECIAT_CH0000326 - hypothetical protein 318 62.23 0 336079..337047 + 322 190889957 - RHECIAT_CH0000327 - probable transcriptional regulator protein, LysR family 319 61.74 0 337098..337949 + 283 190889958 - RHECIAT_CH0000328 - probable transcriptional regulator protein, AraC family 320 61.54 0 337991..338536 + 181 190889959 - RHECIAT_CH0000329 - putative phosphatidylethanolamine-binding protein 321 62.42 0 338622..339092 - 156 190889960 - RHECIAT_CH0000330 - putative acetyltransferase protein 322 58.57 0 339312..339842 - 176 190889961 - RHECIAT_CH0000331 - putative riboflavin biosynthesis reductase protein 323 55.71 -1 340020..340238 - 72 190889962 - RHECIAT_CH0000332 - hypothetical protein 324 63.67 0 340265..340564 + 99 190889963 - RHECIAT_CH0000333 - hypothetical protein 325 63.79 0 340619..342181 - 520 190889964 guaA1 RHECIAT_CH0000334 - GMP synthase (glutamine-hydrolyzing) protein 326 62.91 0 342297..342935 - 212 190889965 pfs RHECIAT_CH0000335 - methylthioadenosine nucleosidase/adenosylhomocysteine nucleosidase protein 327 63.33 0 342932..343441 - 169 190889966 - RHECIAT_CH0000336 - putative phenylacetic acid degradation protein 328 64.35 0 343615..344691 + 358 190889967 - RHECIAT_CH0000337 - hypothetical protein 329 63.75 0 344673..345770 - 365 190889968 - RHECIAT_CH0000338 - hypothetical protein 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0