version 1.0
Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1922 63.56 0 1941370..1942527 + 385 190891561 aspB2 RHECIAT_CH0001959 - aspartate transaminase protein 1923 63.97 0 1942567..1943901 - 444 190891562 - RHECIAT_CH0001960 - hypothetical protein 1924 60.62 0 1944110..1945978 - 622 190891563 phbC RHECIAT_CH0001961 - poly-beta-hydroxybutyrate polymerase protein 1925 67.87 +1 1946125..1946538 + 137 190891564 - RHECIAT_CH0001962 - hypothetical protein 1926 61.87 0 1946748..1947977 + 409 190891565 aatCch RHECIAT_CH0001963 - succinyldiaminopimelate aminotransferase protein 1927 62.52 0 1948039..1949364 + 441 190891566 thrA RHECIAT_CH0001964 - homoserine dehydrogenase protein 1928 57.61 -1 1949566..1949808 + 80 190891567 - RHECIAT_CH0001965 - hypothetical protein 1929 66.56 +1 1949889..1951691 + 600 190891568 recJ RHECIAT_CH0001966 - single-stranded-DNA-specific exonuclease protein 1930 65.22 0 1952536..1953714 - 392 190891569 - RHECIAT_CH0001970 - hypothetical protein 1931 59.86 0 1953780..1954220 - 146 190891570 gloA RHECIAT_CH0001971 - lactoylglutathione lyase methylglyoxalase protein 1932 60.62 0 1954415..1954993 + 192 190891571 cspA3 RHECIAT_CH0001972 - cold shock protein 1933 59.85 0 1955082..1955477 + 131 190891572 - RHECIAT_CH0001973 - hypothetical protein 1934 54.93 -1 1955956..1956168 + 70 190891573 - RHECIAT_CH0001975 - hypothetical protein 1935 59.48 0 1956300..1956605 + 101 190891574 - RHECIAT_CH0001976 - probable NADH-ubiquinone oxidoreductase protein 1936 58.33 -1 1957374..1957721 + 115 190891575 - RHECIAT_CH0001978 - hypothetical protein 1937 64.02 0 1957741..1957929 + 62 190891576 - RHECIAT_CH0001979 - hypothetical protein 1938 60.42 0 1958017..1959858 - 613 190891577 - RHECIAT_CH0001980 - putative RTX toxin hemolysin-type calcium-binding protein 1939 61.18 0 1960317..1960553 + 78 190891578 - RHECIAT_CH0001981 - hypothetical protein 1940 55.91 -1 1960615..1960800 - 61 190891579 - RHECIAT_CH0001982 - hypothetical protein 1941 58.33 -1 1961606..1961917 - 103 190891580 - RHECIAT_CH0001983 - hypothetical protein 1942 61.00 0 1962067..1962507 - 146 190891581 - RHECIAT_CH0001984 - hypothetical protein 1943 57.67 -1 1962674..1962973 + 99 190891582 - RHECIAT_CH0001985 - hypothetical protein 1944 65.98 +1 1963029..1963607 + 192 190891583 - RHECIAT_CH0001986 - hypothetical protein 1945 57.75 -1 1963670..1964443 - 257 190891584 aapP RHECIAT_CH0001987 - general L-amino acid ABC transporter, ATP-binding protein 1946 59.51 0 1964479..1965624 - 381 190891585 aapM RHECIAT_CH0001988 - general L-amino acid ABC transporter, permease protein 1947 59.54 0 1965626..1966846 - 406 190891586 aapQ RHECIAT_CH0001989 - general L-amino acid ABC transporter, permease protein 1948 60.53 0 1966922..1967947 - 341 190891587 aapJ RHECIAT_CH0001990 - general L-amino acid ABC transporter, substrate-binding protein 1949 51.60 -2 1967993..1968211 + 72 190891588 - RHECIAT_CH0001991 - hypothetical protein 1950 62.64 0 1968300..1969490 + 396 190891589 metC RHECIAT_CH0001992 - cystathionine beta-lyase protein 1951 65.07 0 1969527..1970528 - 333 190891590 - RHECIAT_CH0001993 - probable salicylate hydroxylase protein 1952 57.32 -1 1970705..1970950 - 81 190891591 - RHECIAT_CH0001994 - hypothetical protein 1953 63.99 0 1971109..1971894 + 261 190891592 - RHECIAT_CH0001995 - probable hydrolase protein 1954 63.55 0 1972022..1972855 + 277 190891593 cysE1 RHECIAT_CH0001996 - serine acetyltransferase protein 1955 53.43 -2 1972994..1973197 + 67 190891594 - RHECIAT_CH0001997 - hypothetical protein 1956 57.80 -1 1973468..1973839 + 123 190891595 - RHECIAT_CH0001998 - hypothetical protein 1957 53.39 -2 1974115..1974468 + 117 190891596 clpS RHECIAT_CH0001999 - ATP-dependent Clp protease adaptor protein 1958 61.93 0 1974479..1976968 + 829 190891597 clpA RHECIAT_CH0002000 - ATP-dependent Clp protease protein, ATP-binding subunit 1959 59.15 0 1977047..1977472 - 141 190891598 - RHECIAT_CH0002001 - putative hydrolase protein, HIT family 1960 61.96 0 1977527..1978717 - 396 190891599 - RHECIAT_CH0002002 - hypothetical protein 1961 62.22 0 1978795..1979514 - 239 190891600 - RHECIAT_CH0002003 - probable glycerophosphoryl diester phosphodiesterase protein 1962 63.27 0 1979511..1979981 - 156 190891601 - RHECIAT_CH0002004 - putative translation initiation inhibitor protein 1963 61.05 0 1980118..1980954 + 278 190891602 - RHECIAT_CH0002005 - hypothetical protein 1964 62.30 0 1981154..1982230 + 358 190891603 - RHECIAT_CH0002006 - putative toxic anion resistance protein 1965 61.97 0 1982239..1983813 + 524 190891604 - RHECIAT_CH0002007 - hypothetical protein 1966 64.56 0 1983821..1984438 + 205 190891605 - RHECIAT_CH0002008 - hypothetical protein 1967 63.87 0 1984438..1985544 + 368 190891606 - RHECIAT_CH0002009 - hypothetical protein 1968 61.33 0 1985776..1986543 + 255 190891607 rpsB RHECIAT_CH0002010 - 30S ribosomal protein S2 1969 62.57 0 1986783..1987709 + 308 190891608 tsf RHECIAT_CH0002011 - translation elongation factor Ts protein 1970 60.86 0 1987806..1988528 + 240 190891609 pyrH RHECIAT_CH0002012 - uridylate kinase protein 1971 59.54 0 1988599..1989159 + 186 190891610 rrf RHECIAT_CH0002013 - ribosome recycling factor protein 1972 62.37 0 1989197..1989940 + 247 190891611 uppS RHECIAT_CH0002014 - undecaprenyl pyrophosphate synthetase protein 1973 61.37 0 1989940..1990770 + 276 190891612 cdsAch RHECIAT_CH0002015 - phosphatidate cytidylyltransferase protein 1974 61.07 0 1990808..1991932 + 374 190891613 ecfE RHECIAT_CH0002016 - metallopeptidase protein 1975 59.74 0 1992129..1994468 + 779 190891614 omp1 RHECIAT_CH0002017 - outer membrane lipoprotein 1976 61.61 0 1994519..1995586 + 355 190891615 lpxD RHECIAT_CH0002018 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase protein 1977 58.33 -1 1995579..1996046 + 155 190891616 fabZ RHECIAT_CH0002019 - lipid A biosynthesis (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase protein 1978 63.98 0 1996043..1996861 + 272 190891617 lpxA RHECIAT_CH0002020 - lipid A biosynthesis acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamin e O-acyltransferase protein 1979 68.71 +1 1996865..1997746 + 293 190891618 - RHECIAT_CH0002021 - hypothetical protein 1980 61.20 0 1997743..1998912 + 389 190891619 lpxB RHECIAT_CH0002022 - lipid A biosynthesis disaccharide synthase protein 1981 60.00 0 1998948..2000237 - 429 190891620 gltA1 RHECIAT_CH0002023 - citrate synthase protein 1982 64.11 0 2000499..2002961 + 820 190891621 - RHECIAT_CH0002024 - hypothetical protein 1983 62.08 0 2002942..2003661 - 239 190891622 lexA RHECIAT_CH0002025 - transcriptional regulator repressor protein LexA protein 1984 61.87 0 2003858..2004754 + 298 190891623 - RHECIAT_CH0002026 - hypothetical protein 1985 62.65 0 2004751..2005596 + 281 190891624 kdsA RHECIAT_CH0002027 - 3-deoxy-8-phosphooctulonate synthase protein 1986 62.98 0 2005738..2007012 + 424 190891625 eno RHECIAT_CH0002028 - 2-phosphoglycerate dehydratase protein 1987 52.96 -2 2007149..2007469 + 106 190891626 - RHECIAT_CH0002029 - probable cell division protein (septum formation initiator protein) 1988 62.37 0 2007615..2008661 + 348 190891627 pdhA1 RHECIAT_CH0002030 - pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit 1989 61.80 0 2008678..2010075 + 465 190891628 pdhA2 RHECIAT_CH0002031 - pyruvate dehydrogenase (acetyl-transferring) protein, beta subunit 1990 66.37 +1 2010391..2011743 + 450 190891629 pdhC RHECIAT_CH0002032 - dihydrolipoamide S-acetyltransferase protein 1991 62.93 0 2011763..2012404 + 213 190891630 - RHECIAT_CH0002033 - probable arylesterase protein 1992 62.03 0 2012409..2012990 + 193 190891631 - RHECIAT_CH0002034 - putative acetyltransferase protein 1993 63.66 0 2013009..2014472 + 487 190891632 lpdA1 RHECIAT_CH0002035 - dihydrolipoamide dehydrogenase protein 1994 63.45 0 2014590..2014838 + 82 190891633 - RHECIAT_CH0002036 - hypothetical conserved membrane protein 1995 63.05 0 2014853..2015101 + 82 190891634 - RHECIAT_CH0002037 - putative transglycosylase-associated protein 1996 62.96 0 2015149..2016120 + 323 190891635 lipA RHECIAT_CH0002038 - lipoate synthase protein 1997 58.68 0 2016168..2016455 - 95 190891636 - RHECIAT_CH0002039 - hypothetical protein 1998 59.38 0 2016956..2017408 + 150 190891637 - RHECIAT_CH0002041 - putative oligoketide cyclase/dehydrase protein 1999 67.27 +1 2017428..2017928 - 166 190891638 cinA2 RHECIAT_CH0002042 - competence-damage inducible protein (nucleotide-utilizing enzyme) 2000 63.38 0 2017928..2019145 - 405 190891639 ispDF RHECIAT_CH0002043 - ispDF 2001 63.82 0 2019289..2020308 + 339 190891640 nifR RHECIAT_CH0002044 - tRNA-dihydrouridine synthase protein 2002 63.72 0 2020305..2021459 + 384 190891641 ntrB RHECIAT_CH0002045 - two-component sensor histidine kinase nitrogen regulation protein 2003 63.09 0 2021456..2022907 + 483 190891642 ntrC RHECIAT_CH0002046 - two-component response regulator nitrogen regulation protein 2004 58.04 -1 2023336..2024355 - 339 190891643 - RHECIAT_CH0002047 - hypothetical protein 2005 57.60 -1 2024891..2025640 + 249 190891644 - RHECIAT_CH0002048 - hypothetical protein 2006 55.82 -1 2025716..2027200 - 494 190891645 - RHECIAT_CH0002049 - hypothetical protein 2007 58.65 0 2028010..2029506 + 498 190891646 - RHECIAT_CH0002050 - putative sulfatase protein 2008 62.37 0 2029617..2030711 - 364 190891647 - RHECIAT_CH0002051 - putative amine oxidase protein 2009 59.70 0 2030818..2031492 - 224 190891648 - RHECIAT_CH0002052 - hypothetical protein 2010 61.41 0 2031796..2032785 + 329 190891649 - RHECIAT_CH0002053 - probable aldo/keto reductase protein (voltage-gated potassium channel beta subunit) 2011 63.18 0 2032859..2034205 - 448 190891650 - RHECIAT_CH0002054 - putative D-serine ammonia-lyase protein 2012 61.40 0 2034240..2034998 - 252 190891651 - RHECIAT_CH0002055 - putative amino acid ABC transporter, ATP-binding protein 2013 61.35 0 2035024..2036151 - 375 190891652 - RHECIAT_CH0002056 - putative amino acid ABC transporter, permease protein 2014 60.49 0 2036148..2037362 - 404 190891653 - RHECIAT_CH0002057 - putative amino acid ABC transporter, permease protein 2015 60.47 0 2037419..2038450 - 343 190891654 - RHECIAT_CH0002058 - putative amino acid ABC transporter, substrate-binding protein 2016 60.20 0 2038750..2039646 - 298 190891655 - RHECIAT_CH0002059 - probable transcriptional regulator protein, LysR family 2017 62.21 0 2039776..2041053 + 425 190891656 glyA2 RHECIAT_CH0002060 - serine hydroxymethyltransferase protein 2018 61.65 0 2041139..2042035 + 298 190891657 folD2 RHECIAT_CH0002061 - folD2 2019 60.76 0 2042058..2042954 + 298 190891658 purUch2 RHECIAT_CH0002062 - formyltetrahydrofolate deformylase protein 2020 65.21 0 2043341..2045611 + 756 190891659 ntrY RHECIAT_CH0002063 - two-component sensor histidine kinase nitrogen regulation protein 2021 63.37 0 2045601..2046965 + 454 190891660 ntrX RHECIAT_CH0002064 - two-component response regulator nitrogen regulation protein 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0