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Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 79 62.98 0 92298..92975 - 225 190889718 - RHECIAT_CH0000085 - probable transcriptional regulator protein, TetR family 80 60.84 0 93238..94524 + 428 190889719 - RHECIAT_CH0000086 - probable sugar ABC transporter, substrate-binding protein 81 61.67 0 94531..95490 + 319 190889720 - RHECIAT_CH0000087 - probable sugar ABC transporter, permease protein 82 59.23 0 95483..96370 + 295 190889721 - RHECIAT_CH0000088 - probable sugar ABC transporter, permease protein 83 62.01 0 96394..97467 + 357 190889722 - RHECIAT_CH0000089 - putative oxidoreductase protein 84 62.67 0 97505..98581 + 358 190889723 - RHECIAT_CH0000090 - probable sugar ABC transporter, ATP-binding protein 85 61.19 0 98680..99555 + 291 190889724 - RHECIAT_CH0000091 - putative ethanolamine kinase protein 86 62.63 0 99556..102006 + 816 190889725 - RHECIAT_CH0000092 - probable sarcosine dehydrogenase protein 87 64.47 0 102290..103747 - 485 190889726 uxuB RHECIAT_CH0000093 - D-mannonate oxidoreductase protein 88 64.76 0 103744..105159 - 471 190889727 uxaC RHECIAT_CH0000094 - glucuronate isomerase protein 89 58.90 0 105241..105549 + 102 190889728 - RHECIAT_CH0000095 - hypothetical protein 90 65.38 +1 105596..107077 - 493 190889729 gabDch RHECIAT_CH0000096 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) protein 91 65.03 0 107135..108415 - 426 190889730 gabT RHECIAT_CH0000097 - 4-aminobutyrate aminotransferase protein 92 65.55 +1 108579..109385 + 268 190889731 - RHECIAT_CH0000098 - probable transcriptional regulator protein, MerR family 93 61.56 0 109491..110117 + 208 190889732 rnd1 RHECIAT_CH0000099 - ribonuclease III protein 94 66.15 +1 110390..111940 + 516 190889733 - RHECIAT_CH0000100 - hypothetical protein 95 60.33 0 112019..113722 - 567 190889734 rpsA RHECIAT_CH0000101 - 30S ribosomal protein S1 96 63.73 0 113896..114543 - 215 190889735 cmk RHECIAT_CH0000102 - cytidylate kinase protein 97 57.29 -1 114873..115256 + 127 190889736 - RHECIAT_CH0000103 - hypothetical protein 98 50.00 -2 115603..115842 + 79 190889737 - RHECIAT_CH0000105 - putative excinuclease ABC protein, C subunit 99 61.51 0 115961..117784 - 607 190889738 - RHECIAT_CH0000106 - hypothetical protein 100 59.59 0 118016..119131 + 371 190889739 - RHECIAT_CH0000107 - putative fusion protein: hypothetical conserved protein and adenylate cyclase protein 101 59.85 0 119156..120094 - 312 190889740 - RHECIAT_CH0000108 - hypothetical protein 102 61.69 0 120123..121508 - 461 190889741 - RHECIAT_CH0000109 - hypothetical protein 103 60.95 0 121551..121865 - 104 190889742 - RHECIAT_CH0000110 - hypothetical protein 104 59.94 0 122209..122520 + 103 190889743 - RHECIAT_CH0000111 - hypothetical protein 105 60.45 0 122520..123677 + 385 190889744 - RHECIAT_CH0000112 - probable protein secretion protein, HlyD family 106 63.61 0 123782..125482 + 566 190889745 - RHECIAT_CH0000113 - putative sulfate transporter protein 107 59.10 0 125502..126347 + 281 190889746 - RHECIAT_CH0000114 - putative polyphosphate kinase protein 108 59.93 0 126367..127524 + 385 190889747 - RHECIAT_CH0000115 - hypothetical protein 109 55.27 -1 127587..127823 - 78 190889748 - RHECIAT_CH0000116 - hypothetical protein 110 57.37 -1 127963..128274 - 103 190889749 - RHECIAT_CH0000117 - hypothetical protein 111 61.10 0 128328..129422 - 364 190889750 - RHECIAT_CH0000118 - probable Na+/H+ antiporter protein 112 64.83 0 129557..130480 - 307 190889751 - RHECIAT_CH0000119 - putative amino acid ABC transporter, substrate-binding protein 113 61.74 0 130498..131856 - 452 190889752 - RHECIAT_CH0000120 - probable amino acid ABC transporter, permease protein 114 59.94 0 131876..134239 - 787 190889753 - RHECIAT_CH0000121 - probable ornithine decarboxylase protein 115 61.80 0 134236..136497 - 753 190889754 - RHECIAT_CH0000122 - probable lysine decarboxylase protein 116 60.10 0 136654..137688 - 344 190889755 - RHECIAT_CH0000123 - probable cation efflux protein 117 56.08 -1 137768..138334 - 188 190889756 - RHECIAT_CH0000124 - hypothetical protein 118 63.57 0 138438..139793 + 451 190889757 - RHECIAT_CH0000125 - probable amino acid transporter, permease protein 119 63.35 0 139809..140744 - 311 190889758 arcC RHECIAT_CH0000126 - carbamate kinase protein 120 58.41 0 140746..141750 - 334 190889759 arcB RHECIAT_CH0000127 - ornithine carbamoyltransferase protein 121 61.38 0 141788..143017 - 409 190889760 arcA RHECIAT_CH0000128 - arginine deiminase protein 122 59.05 0 143018..143713 + 231 190889761 - RHECIAT_CH0000129 - hypothetical protein 123 60.88 0 143758..145002 + 414 190889762 fixL RHECIAT_CH0000130 - two-component sensor histidine kinase nitrogen regulation protein 124 59.94 0 144968..145636 + 222 190889763 fixJ RHECIAT_CH0000131 - two-component response regulator nitrogen regulation protein 125 60.66 0 145731..147512 + 593 190889764 - RHECIAT_CH0000132 - hypothetical protein 126 60.08 0 147575..148546 - 323 190889765 - RHECIAT_CH0000133 - hypothetical protein 127 58.48 0 148687..149346 + 219 190889766 - RHECIAT_CH0000134 - putative nitrogen fixation transcriptional regulator protein 128 57.78 -1 149372..149731 + 119 190889767 - RHECIAT_CH0000135 - hypothetical protein 129 64.57 0 149768..151720 - 650 190889768 - RHECIAT_CH0000136 - putative mechanosensitive ion channel protein 130 61.63 0 151732..152943 - 403 190889769 - RHECIAT_CH0000137 - hypothetical protein 131 63.07 0 153201..153923 + 240 190889770 - RHECIAT_CH0000138 - hypothetical protein 132 62.23 0 154095..154883 + 262 190889771 - RHECIAT_CH0000139 - hypothetical protein 133 58.02 -1 154887..155360 - 157 190889772 - RHECIAT_CH0000140 - hypothetical protein 134 63.84 0 155476..156111 + 211 190889773 - RHECIAT_CH0000141 - hypothetical conserved membrane protein 135 63.81 0 156175..156594 - 139 190889774 irr RHECIAT_CH0000142 - iron transcriptional regulator protein 136 62.40 0 156896..157411 + 171 190889775 fabA RHECIAT_CH0000143 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase protein 137 62.94 0 157457..158689 + 410 190889776 fabB RHECIAT_CH0000144 - 3-oxoacyl-[acyl-carrier-protein] synthase protein 138 62.83 0 158694..159500 + 268 190889777 fabI1 RHECIAT_CH0000145 - enoyl-[acyl-carrier-protein] reductase (NADH) protein 139 65.68 +1 159594..160610 - 338 190889778 - RHECIAT_CH0000146 - probable rRNA (guanine-N(2)-)-methyltransferase protein 140 62.99 0 160741..162861 - 706 190889779 pnp RHECIAT_CH0000147 - polyribonucleotide nucleotidyltransferase protein 141 58.87 0 162865..163146 + 93 190889780 - RHECIAT_CH0000148 - hypothetical protein 142 55.93 -1 163230..163499 - 89 190889781 rpsO RHECIAT_CH0000149 - 30S ribosomal protein S15 143 59.27 0 163650..164501 - 283 190889782 - RHECIAT_CH0000150 - putative hydrolase protein 144 63.67 0 164580..165512 - 310 190889783 truB RHECIAT_CH0000151 - tRNA pseudouridine synthase B protein 145 61.73 0 165525..165929 - 134 190889784 rbfA RHECIAT_CH0000152 - ribosome binding factor A, rRNA processing protein 146 65.87 +1 166091..168844 - 917 190889785 infB RHECIAT_CH0000153 - translation initiation factor IF-2 protein 147 63.77 0 168947..169636 - 229 190889786 - RHECIAT_CH0000154 - hypothetical protein 148 62.30 0 169636..171237 - 533 190889787 nusA RHECIAT_CH0000155 - N-utilization substance protein (transcription elongation factor) 149 57.62 -1 171298..171894 - 198 190889788 - RHECIAT_CH0000156 - hypothetical protein 150 65.09 0 172053..173768 + 571 190889789 - RHECIAT_CH0000157 - putative ABC transporter, permease protein 151 62.72 0 173777..174232 + 151 190889790 - RHECIAT_CH0000158 - putative acetyltransferase protein 152 63.29 0 174237..175508 - 423 190889791 - RHECIAT_CH0000159 - probable transglycosylase protein 153 63.70 0 175694..176299 - 201 190889792 recR RHECIAT_CH0000160 - DNA recombination protein 154 61.04 0 176318..176974 + 218 190889793 - RHECIAT_CH0000161 - hypothetical protein 155 62.96 0 177034..177357 - 107 190889794 - RHECIAT_CH0000162 - hypothetical protein 156 66.08 +1 177379..179250 - 623 190889795 dnaX RHECIAT_CH0000163 - DNA polymerase III, tau subunit protein (DNA-directed DNA polymerase) 157 58.85 0 179627..180163 + 178 190889796 - RHECIAT_CH0000164 - hypothetical protein 158 63.54 0 180160..181119 + 319 190889797 - RHECIAT_CH0000165 - putative NTP pyrophosphohydrolase protein, MutT/nudix family 159 66.52 +1 181124..181819 + 231 190889798 - RHECIAT_CH0000166 - putative transcriptional regulator protein 160 65.13 0 181892..182152 + 86 190889799 - RHECIAT_CH0000167 - hypothetical protein 161 63.14 0 182278..182646 + 122 190889800 - RHECIAT_CH0000168 - putative glyoxalase/dioxygenase protein 162 60.47 0 182718..183572 - 284 190889801 pheA RHECIAT_CH0000169 - prephenate dehydrogenase protein 163 63.49 0 183695..184450 - 251 190889802 kdsB RHECIAT_CH0000170 - 3-deoxy-manno-octulosonate cytidylyltransferase protein 164 59.61 0 184604..185170 + 188 190889803 cycM RHECIAT_CH0000171 - cytochrome c protein 165 64.03 0 185240..186187 - 315 190889804 - RHECIAT_CH0000172 - probable ABC transporter, permease protein 166 61.43 0 186606..187598 + 330 190889805 - RHECIAT_CH0000173 - putative sugar kinase protein 167 63.33 0 187591..188130 - 179 190889806 - RHECIAT_CH0000174 - hypothetical protein 168 64.67 0 188314..189315 + 333 190889807 - RHECIAT_CH0000175 - probable D-2-hydroxyacid dehydrogenase protein 169 62.58 0 189322..189810 - 162 190889808 - RHECIAT_CH0000176 - putative acetyltransferase protein 170 64.73 0 189807..190631 - 274 190889809 moeB RHECIAT_CH0000177 - molydopterin synthase sulfurylase protein 171 66.13 +1 190628..191752 - 374 190889810 recF RHECIAT_CH0000178 - DNA replication and repair protein 172 51.91 -2 191863..192045 + 60 190889811 - RHECIAT_CH0000179 - hypothetical protein 173 54.74 -2 192148..192516 + 122 190889812 - RHECIAT_CH0000180 - putative transcriptional regulator protein, Cro/CI family 174 57.53 -1 192636..193007 - 123 190889813 - RHECIAT_CH0000181 - hypothetical protein 175 63.65 0 193193..194320 - 375 190889814 dnaJ1 RHECIAT_CH0000182 - molecular chaperone protein DnaJ 176 61.35 0 194405..196324 - 639 190889815 dnaK1 RHECIAT_CH0000183 - molecular chaperone heat shock protein (hsp70) 177 64.47 0 196673..198997 - 774 190889816 - RHECIAT_CH0000184 - probable penicillin binding protein 178 59.00 0 199245..199505 - 86 190889817 - RHECIAT_CH0000185 - hypothetical protein 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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