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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 906 64.86 +1 979042..979650 - 202 86356575 bioN RHE_CH00929 - biotin transporter, permease protein 907 66.07 +1 979650..980324 - 224 86356576 bioM RHE_CH00930 - biotin transporter, ATP-binding protein 908 63.14 0 980670..981860 + 396 86356577 - RHE_CH00931 - hypothetical protein 909 59.59 0 982198..983130 - 310 86356578 - RHE_CH00932 - hypothetical protein 910 66.77 +1 983275..984273 + 332 86356579 - RHE_CH00933 - LysR family transcriptional regulator 911 64.02 0 984640..985848 + 402 86356580 ribA RHE_CH00934 - GTP cyclohydrolase/3,4-dihydroxy-2-butanone 4-phosphate synthase bi-functional protein (ribofalvinbiosynthesis) 912 64.75 0 985809..986906 - 365 86356581 aroC RHE_CH00935 - chorismate synthase 913 56.70 -1 987259..987519 + 86 86356582 - RHE_CH00936 - hypothetical protein 914 64.97 +1 987553..988143 - 196 86356583 gpmB RHE_CH00937 - phosphoglycerate mutase protein 915 59.34 0 988164..988982 - 272 86356584 fabI2 RHE_CH00938 - enoyl-(acyl carrier protein) reductase 916 64.64 0 989104..990288 - 394 86356585 dnaJ2 RHE_CH00939 - DnaJ family molecular chaperone 917 62.96 0 990629..991087 - 152 86356586 - RHE_CH00940 - hypothetical protein 918 60.87 0 991153..991773 + 206 86356587 pdxH RHE_CH00941 - pyridoxamine 5'-phosphate oxidase 919 65.72 +1 991779..992729 - 316 86356588 - RHE_CH00942 - hypothetical protein 920 59.45 0 992701..993102 + 133 86356589 - RHE_CH00943 - hypothetical protein 921 65.40 +1 993053..994312 + 419 86356590 dacF1 RHE_CH00944 - D-alanyl-D-alanine carboxypeptidase protein 922 63.84 0 994389..994706 + 105 86356591 - RHE_CH00945 - hypothetical protein 923 61.44 0 994752..995765 - 337 86356592 pit RHE_CH00946 - phosphate transporter protein 924 56.85 -1 995765..996406 - 213 86356593 - RHE_CH00947 - phosphate transporter 925 58.01 -1 996622..997164 + 180 86356594 - RHE_CH00948 - MutT/NUDIX family NTP pyrophosphohydrolase 926 62.80 0 997208..997699 - 163 86356595 - RHE_CH00949 - acetyltransferase protein 927 65.54 +1 997714..999129 - 471 86356596 tldD RHE_CH00950 - Zn-dependent protease protein 928 64.91 +1 999528..1000322 - 264 86356597 - RHE_CH00951 - hypothetical protein 929 61.36 0 1000665..1001549 + 294 86356598 ctaC RHE_CH00952 - cytochrome-c oxidase, subunit II protein 930 61.43 0 1001567..1003267 + 566 86356599 ctaD RHE_CH00953 - cytochrome-c oxidase, subunit I protein 931 63.09 0 1003334..1004284 + 316 86356600 ctaB RHE_CH00954 - protoheme IX farnesyltransferase 932 58.13 -1 1004421..1005029 + 202 86356601 ctaG RHE_CH00955 - cytochrome C oxidase assembly protein 933 61.66 0 1005090..1005968 + 292 86356602 ctaE RHE_CH00956 - cytochrome-c oxidase, subunit III protein 934 55.68 -1 1006001..1006546 + 181 86356603 - RHE_CH00957 - hypothetical protein 935 62.93 0 1007024..1007665 - 213 86356604 - RHE_CH00958 - chloranphenicol phosphotransferase protein 936 60.37 0 1007784..1008164 + 126 86356605 - RHE_CH00959 - hypothetical protein 937 63.85 0 1008202..1008912 + 236 86356606 - RHE_CH00960 - putative cytochrome oxidase complex biogenesis factor transmembrane protein 938 63.92 0 1009136..1010155 + 339 86356607 ispH RHE_CH00961 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 939 61.39 0 1010211..1011176 + 321 86356608 thrB RHE_CH00962 - homoserine kinase 940 61.84 0 1011173..1011628 + 151 86356609 rnhA RHE_CH00963 - ribonuclease H 941 63.21 0 1012218..1013288 - 356 86356610 - RHE_CH00964 - hypothetical protein 942 63.02 0 1013375..1013566 - 63 86356611 - RHE_CH00965 - hypothetical protein 943 62.71 0 1013685..1014290 - 201 86356612 - RHE_CH00966 - hypothetical protein 944 65.17 +1 1014467..1015270 + 267 86356613 - RHE_CH00967 - hypothetical protein 945 64.81 +1 1015353..1015838 + 161 86356614 - RHE_CH00968 - peroxiredoxin protein 946 66.80 +1 1016476..1017225 + 249 86356615 - RHE_CH00969 - zinc ABC transporter ATP-binding protein 947 66.44 +1 1017222..1018094 + 290 86356616 - RHE_CH00970 - zinc ABC transporter permease 948 61.78 0 1018111..1019010 + 299 86356617 - RHE_CH00971 - zinc ABC transporter substrate-binding protein 949 61.47 0 1019192..1019884 - 230 86356618 - RHE_CH00972 - molybdate ABC transporter substrate-binding protein 950 58.90 0 1019908..1020216 - 102 86356619 - RHE_CH00973 - hypothetical protein 951 62.86 0 1020324..1022504 - 726 86356620 mcpX2 RHE_CH00974 - methyl-accepting chemotaxis protein 952 62.08 0 1022833..1023312 - 159 86356621 - RHE_CH00975 - hypothetical protein 953 65.46 +1 1023370..1026267 - 965 86356622 - RHE_CH00976 - putative sensory box/GGDEF family protein 954 59.84 0 1026279..1026893 - 204 86356623 rimJ RHE_CH00977 - alanine acetyltransferase (ribosomal) protein 955 64.04 0 1026922..1028217 - 431 86356624 - RHE_CH00978 - processing protease protein 956 63.23 0 1028221..1029645 - 474 86356625 thrC RHE_CH00979 - threonine synthase 957 65.27 +1 1029911..1030555 + 214 86356626 - RHE_CH00980 - hypothetical protein 958 64.10 0 1030599..1031417 - 272 86356627 - RHE_CH00981 - cytochrome-c protein 959 61.46 0 1031417..1032952 - 511 86356628 - RHE_CH00982 - cytochrome-c oxidase, subunit I protein 960 62.72 0 1033029..1033586 - 185 86356629 - RHE_CH00983 - cytochrome-c oxidase, subunit II protein 961 62.59 0 1033761..1035011 - 416 86356630 - RHE_CH00984 - cytochrome-c oxidase protein 962 66.11 +1 1035014..1035727 - 237 86356631 - RHE_CH00985 - cytochrome-c oxidase protein 963 63.62 0 1036045..1036734 - 229 86356632 - RHE_CH00986 - hydrolase phosphatase protein 964 64.86 +1 1036892..1038277 - 461 86356633 - RHE_CH00987 - multidrug ABC transporter 965 63.55 0 1038395..1039291 + 298 86356634 - RHE_CH00988 - LysR family transcriptional regulator 966 63.29 0 1039404..1039847 - 147 86356635 - RHE_CH00989 - hypothetical protein 967 62.03 0 1039857..1040201 - 114 86356636 - RHE_CH00990 - hypothetical protein 968 70.73 +2 1040253..1040720 - 155 86356637 - RHE_CH00991 - hypothetical protein 969 67.98 +1 1040948..1041634 - 228 86356638 - RHE_CH00992 - ArsR family transcriptional regulator 970 60.30 0 1041705..1042034 + 109 86356639 - RHE_CH00993 - hypothetical protein 971 63.25 0 1042031..1042381 + 116 86356640 - RHE_CH00994 - hypothetical protein 972 62.29 0 1042499..1043641 + 380 86356641 ccrM RHE_CH00995 - site-specific DNA-methyltransferase (adenine-specific) protein 973 59.67 0 1044110..1044724 - 204 86356642 - RHE_CH00996 - hydrolase protein 974 64.13 0 1044727..1045830 - 367 86356643 mutY RHE_CH00997 - A/G-specific adenine glycosylase protein 975 67.03 +1 1045873..1046424 + 183 86356644 - RHE_CH00998 - hypothetical protein 976 60.51 0 1047009..1047788 + 259 86356645 - RHE_CH00999 - putative thiol-disulfide oxidoreductase protein 977 68.46 +2 1047892..1051353 + 1153 86356646 smc RHE_CH01000 - chromosome partition protein 978 65.75 +1 1051359..1052012 - 217 86356647 gstch4 RHE_CH01001 - glutathione S-transferase protein 979 55.67 -1 1052086..1052685 - 199 86356648 - RHE_CH01002 - hypothetical protein 980 65.39 +1 1052894..1055560 + 888 86356649 ppdK RHE_CH01003 - pyruvate phosphate dikinase 981 64.85 +1 1055570..1056118 - 182 86356650 - RHE_CH01004 - hypothetical protein 982 59.02 0 1056476..1056802 + 108 86356651 - RHE_CH01005 - hypothetical protein 983 67.95 +1 1056889..1057278 - 129 86356652 - RHE_CH01006 - hypothetical protein 984 66.89 +1 1057622..1058527 + 301 86356653 - RHE_CH01007 - hypothetical protein 985 65.49 +1 1058691..1059371 - 226 86356654 - RHE_CH01008 - hypothetical protein 986 62.38 0 1059486..1060418 - 310 86356655 - RHE_CH01009 - polyhydroxybutyrate depolymerase protein 987 58.50 0 1060481..1060933 - 150 86356656 - RHE_CH01010 - MutT/NUDIX family NTP pyrophosphohydrolase 988 69.80 +2 1061320..1063041 - 573 86356657 - RHE_CH01011 - hypothetical protein 989 61.33 0 1063038..1063487 - 149 86356658 - RHE_CH01012 - hypothetical protein 990 66.98 +1 1063509..1064462 - 317 86356659 - RHE_CH01013 - beta-lactamase family protein 991 53.53 -2 1064773..1065495 + 240 86356660 - RHE_CH01015 - hypothetical protein 992 53.74 -2 1065492..1065986 + 164 86356661 - RHE_CH01016 - hypothetical protein 993 55.72 -1 1066178..1067200 - 340 86356662 - RHE_CH01017 - hypothetical protein 994 68.37 +2 1067858..1068799 - 313 86356663 - RHE_CH01018 - oxidoreducatse protein 995 69.09 +2 1069095..1069712 - 205 86356664 - RHE_CH01019 - TetR family transcriptional regulator 996 69.00 +2 1069824..1070510 + 228 86356665 - RHE_CH01020 - putative negative regulator protein PspA (suppresses sigma54-dependent transcription) 997 55.32 -1 1070558..1070839 + 93 86356666 - RHE_CH01021 - hypothetical protein 998 64.21 0 1070949..1074329 + 1126 86356667 aas RHE_CH01022 - acylglycerophosphoethanolamine acyltransferase 999 66.82 +1 1074761..1076080 - 439 86356668 tetA RHE_CH01023 - tetracycline efflux transporter protein 1000 65.24 +1 1076496..1079510 + 1004 86356669 - RHE_CH01024 - phosphoglycerate dehydrogenase protein 1001 63.97 0 1079965..1080372 - 135 86356670 - RHE_CH01025 - hypothetical protein 1002 60.83 0 1081145..1082497 + 450 86356671 - RHE_CH01027 - hypothetical protein 1003 62.37 0 1082632..1083027 - 131 86356672 - RHE_CH01028 - putative transcriptional regulator protein 1004 61.72 0 1083154..1084002 + 282 86356673 - RHE_CH01029 - putative nucleoside-diphosphate-sugar epimerase protein 1005 57.58 -1 1084019..1084414 + 131 86356674 - RHE_CH01030 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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