version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 865 61.94 0 928944..930869 + 641 86356534 mcpV2 RHE_CH00888 - methyl-accepting chemotaxis protein 866 67.28 +1 931005..931493 - 162 86356535 - RHE_CH00889 - hypothetical protein 867 64.82 +1 931735..933849 - 704 86356536 glyS RHE_CH00890 - glycyl-tRNA synthetase subunit beta 868 65.80 +1 934096..936405 + 769 86356537 - RHE_CH00891 - transcriptional accessory protein 869 59.76 0 936539..937798 + 419 86356538 cfa RHE_CH00892 - cyclopropane-fatty-acyl-phospholipid synthase protein 870 68.21 +2 937833..938414 + 193 86356539 - RHE_CH00893 - phosphoglycerate mutase protein 871 61.99 0 938723..939535 + 270 86356540 - RHE_CH00894 - hypothetical protein 872 62.08 0 939652..940611 + 319 86356541 ubiA RHE_CH00895 - prenyltransferase 873 66.14 +1 940694..941260 - 188 86356542 - RHE_CH00896 - hypothetical protein 874 59.83 0 941562..944894 + 1110 86356543 - RHE_CH00897 - hypothetical protein 875 64.71 0 945008..946441 - 477 86356544 - RHE_CH00898 - FAD-dependent oxidoreductase protein 876 67.66 +1 946469..947479 - 336 86356545 - RHE_CH00899 - translation factor sua5 protein 877 61.25 0 947518..948126 - 202 86356546 - RHE_CH00900 - hypothetical protein 878 61.12 0 948530..949774 + 414 86356547 - RHE_CH00901 - dioxygenase protein 879 64.25 0 949927..950382 + 151 86356548 - RHE_CH00902 - hypothetical protein 880 58.45 0 950645..951058 + 137 86356549 - RHE_CH00903 - hypothetical protein 881 62.05 0 951442..952437 - 331 86356550 - RHE_CH00904 - magnesium/cobalt transporter CorA 882 66.05 +1 952645..954426 + 593 86356551 - RHE_CH00905 - acyl-CoA dehydrogenase protein 883 64.67 0 954456..955208 + 250 86356552 - RHE_CH00906 - enoyl-CoA hydratase 884 62.59 0 955258..956262 - 334 86356553 - RHE_CH00907 - hypothetical protein 885 63.25 0 956341..957159 - 272 86356554 - RHE_CH00908 - short chain dehydrogenase 886 60.44 0 957245..957694 + 149 86356555 - RHE_CH00909 - putative transcriptional regulator protein 887 66.43 +1 957746..958996 - 416 86356556 - RHE_CH00910 - RNA-methyltransferase protein 888 67.87 +1 958993..959739 - 248 86356557 tlyA RHE_CH00911 - hemolysin protein 889 64.66 0 960013..961956 + 647 86356558 mcpU RHE_CH00912 - methyl-accepting chemotaxis protein 890 65.88 +1 962175..964091 - 638 86356559 dxs RHE_CH00913 - 1-deoxy-D-xylulose-5-phosphate synthase 891 63.53 0 964340..965263 - 307 86356560 - RHE_CH00914 - hypothetical protein 892 65.27 +1 965323..966036 + 237 86356561 - RHE_CH00915 - putative oxidoreductase protein 893 63.10 0 966190..966441 - 83 86356562 - RHE_CH00916 - exodeoxyribonuclease VII small subunit 894 63.57 0 966444..967379 - 311 86356563 - RHE_CH00917 - deacetylase protein 895 59.95 0 967568..967969 + 133 86356564 - RHE_CH00918 - putative thioesterase protein 896 62.37 0 967977..968627 - 216 86356565 matR RHE_CH00919 - AsnC/GntR family transcriptional regulator 897 63.02 0 968786..970210 + 474 86356566 matA RHE_CH00920 - malonyl-CoA decarboxylase protein 898 63.25 0 970231..971721 + 496 86356567 matB RHE_CH00921 - malonyl-CoA synthase 899 62.07 0 971815..973164 + 449 86356568 matC RHE_CH00922 - dicarboxylate-carrier protein 900 59.06 0 973433..974497 + 354 86356569 - RHE_CH00923 - LuxR family transcriptional regulator 901 55.81 -1 974547..974933 - 128 86356570 ectC RHE_CH00924 - L-ectoine synthase 902 60.00 0 975113..975997 + 294 86356571 - RHE_CH00925 - LysR family transcriptional regulator 903 62.21 0 976098..976568 - 156 86356572 - RHE_CH00926 - hypothetical protein 904 59.65 0 977113..978252 + 379 86356573 - RHE_CH00927 - putative acetyltransferase protein 905 68.09 +2 978454..979017 - 187 86356574 bioY RHE_CH00928 - biotin transporter protein 906 64.86 +1 979042..979650 - 202 86356575 bioN RHE_CH00929 - biotin transporter, permease protein 907 66.07 +1 979650..980324 - 224 86356576 bioM RHE_CH00930 - biotin transporter, ATP-binding protein 908 63.14 0 980670..981860 + 396 86356577 - RHE_CH00931 - hypothetical protein 909 59.59 0 982198..983130 - 310 86356578 - RHE_CH00932 - hypothetical protein 910 66.77 +1 983275..984273 + 332 86356579 - RHE_CH00933 - LysR family transcriptional regulator 911 64.02 0 984640..985848 + 402 86356580 ribA RHE_CH00934 - GTP cyclohydrolase/3,4-dihydroxy-2-butanone 4-phosphate synthase bi-functional protein (ribofalvinbiosynthesis) 912 64.75 0 985809..986906 - 365 86356581 aroC RHE_CH00935 - chorismate synthase 913 56.70 -1 987259..987519 + 86 86356582 - RHE_CH00936 - hypothetical protein 914 64.97 +1 987553..988143 - 196 86356583 gpmB RHE_CH00937 - phosphoglycerate mutase protein 915 59.34 0 988164..988982 - 272 86356584 fabI2 RHE_CH00938 - enoyl-(acyl carrier protein) reductase 916 64.64 0 989104..990288 - 394 86356585 dnaJ2 RHE_CH00939 - DnaJ family molecular chaperone 917 62.96 0 990629..991087 - 152 86356586 - RHE_CH00940 - hypothetical protein 918 60.87 0 991153..991773 + 206 86356587 pdxH RHE_CH00941 - pyridoxamine 5'-phosphate oxidase 919 65.72 +1 991779..992729 - 316 86356588 - RHE_CH00942 - hypothetical protein 920 59.45 0 992701..993102 + 133 86356589 - RHE_CH00943 - hypothetical protein 921 65.40 +1 993053..994312 + 419 86356590 dacF1 RHE_CH00944 - D-alanyl-D-alanine carboxypeptidase protein 922 63.84 0 994389..994706 + 105 86356591 - RHE_CH00945 - hypothetical protein 923 61.44 0 994752..995765 - 337 86356592 pit RHE_CH00946 - phosphate transporter protein 924 56.85 -1 995765..996406 - 213 86356593 - RHE_CH00947 - phosphate transporter 925 58.01 -1 996622..997164 + 180 86356594 - RHE_CH00948 - MutT/NUDIX family NTP pyrophosphohydrolase 926 62.80 0 997208..997699 - 163 86356595 - RHE_CH00949 - acetyltransferase protein 927 65.54 +1 997714..999129 - 471 86356596 tldD RHE_CH00950 - Zn-dependent protease protein 928 64.91 +1 999528..1000322 - 264 86356597 - RHE_CH00951 - hypothetical protein 929 61.36 0 1000665..1001549 + 294 86356598 ctaC RHE_CH00952 - cytochrome-c oxidase, subunit II protein 930 61.43 0 1001567..1003267 + 566 86356599 ctaD RHE_CH00953 - cytochrome-c oxidase, subunit I protein 931 63.09 0 1003334..1004284 + 316 86356600 ctaB RHE_CH00954 - protoheme IX farnesyltransferase 932 58.13 -1 1004421..1005029 + 202 86356601 ctaG RHE_CH00955 - cytochrome C oxidase assembly protein 933 61.66 0 1005090..1005968 + 292 86356602 ctaE RHE_CH00956 - cytochrome-c oxidase, subunit III protein 934 55.68 -1 1006001..1006546 + 181 86356603 - RHE_CH00957 - hypothetical protein 935 62.93 0 1007024..1007665 - 213 86356604 - RHE_CH00958 - chloranphenicol phosphotransferase protein 936 60.37 0 1007784..1008164 + 126 86356605 - RHE_CH00959 - hypothetical protein 937 63.85 0 1008202..1008912 + 236 86356606 - RHE_CH00960 - putative cytochrome oxidase complex biogenesis factor transmembrane protein 938 63.92 0 1009136..1010155 + 339 86356607 ispH RHE_CH00961 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 939 61.39 0 1010211..1011176 + 321 86356608 thrB RHE_CH00962 - homoserine kinase 940 61.84 0 1011173..1011628 + 151 86356609 rnhA RHE_CH00963 - ribonuclease H 941 63.21 0 1012218..1013288 - 356 86356610 - RHE_CH00964 - hypothetical protein 942 63.02 0 1013375..1013566 - 63 86356611 - RHE_CH00965 - hypothetical protein 943 62.71 0 1013685..1014290 - 201 86356612 - RHE_CH00966 - hypothetical protein 944 65.17 +1 1014467..1015270 + 267 86356613 - RHE_CH00967 - hypothetical protein 945 64.81 +1 1015353..1015838 + 161 86356614 - RHE_CH00968 - peroxiredoxin protein 946 66.80 +1 1016476..1017225 + 249 86356615 - RHE_CH00969 - zinc ABC transporter ATP-binding protein 947 66.44 +1 1017222..1018094 + 290 86356616 - RHE_CH00970 - zinc ABC transporter permease 948 61.78 0 1018111..1019010 + 299 86356617 - RHE_CH00971 - zinc ABC transporter substrate-binding protein 949 61.47 0 1019192..1019884 - 230 86356618 - RHE_CH00972 - molybdate ABC transporter substrate-binding protein 950 58.90 0 1019908..1020216 - 102 86356619 - RHE_CH00973 - hypothetical protein 951 62.86 0 1020324..1022504 - 726 86356620 mcpX2 RHE_CH00974 - methyl-accepting chemotaxis protein 952 62.08 0 1022833..1023312 - 159 86356621 - RHE_CH00975 - hypothetical protein 953 65.46 +1 1023370..1026267 - 965 86356622 - RHE_CH00976 - putative sensory box/GGDEF family protein 954 59.84 0 1026279..1026893 - 204 86356623 rimJ RHE_CH00977 - alanine acetyltransferase (ribosomal) protein 955 64.04 0 1026922..1028217 - 431 86356624 - RHE_CH00978 - processing protease protein 956 63.23 0 1028221..1029645 - 474 86356625 thrC RHE_CH00979 - threonine synthase 957 65.27 +1 1029911..1030555 + 214 86356626 - RHE_CH00980 - hypothetical protein 958 64.10 0 1030599..1031417 - 272 86356627 - RHE_CH00981 - cytochrome-c protein 959 61.46 0 1031417..1032952 - 511 86356628 - RHE_CH00982 - cytochrome-c oxidase, subunit I protein 960 62.72 0 1033029..1033586 - 185 86356629 - RHE_CH00983 - cytochrome-c oxidase, subunit II protein 961 62.59 0 1033761..1035011 - 416 86356630 - RHE_CH00984 - cytochrome-c oxidase protein 962 66.11 +1 1035014..1035727 - 237 86356631 - RHE_CH00985 - cytochrome-c oxidase protein 963 63.62 0 1036045..1036734 - 229 86356632 - RHE_CH00986 - hydrolase phosphatase protein 964 64.86 +1 1036892..1038277 - 461 86356633 - RHE_CH00987 - multidrug ABC transporter 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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