version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 21 61.90 0 18751..19590 + 279 86355690 trpA RHE_CH00022 - tryptophan synthase subunit alpha 22 60.04 0 19630..20535 + 301 86355691 accD RHE_CH00023 - acetyl-CoA carboxylase subunit beta 23 62.04 0 20620..21915 + 431 86355692 folC RHE_CH00024 - bifunctional folylpolyglutamate synthase/dihydrofolate syntase 24 56.70 -1 21976..22296 - 106 86355693 trxA1 RHE_CH00025 - thioredoxin protein 25 64.05 0 22372..25923 - 1183 86355694 - RHE_CH00026 - nuclease/helicase protein, ATP dependent 26 65.38 +1 25916..29110 - 1064 86355695 - RHE_CH00027 - hypothetical protein 27 60.66 0 29115..29846 - 243 86355696 - RHE_CH00028 - nucleotidyltransferase protein 28 62.31 0 29860..31374 - 504 86355697 - RHE_CH00029 - hypothetical protein 29 63.38 0 31371..33953 - 860 86355698 - RHE_CH00030 - two-component sensor histidine kinase protein 30 60.39 0 34157..35557 - 466 86355699 ahcY RHE_CH00031 - S-adenosyl-L-homocysteine hydrolase 31 57.25 -1 35702..35977 - 91 86355700 - RHE_CH00032 - phosphocarrier protein HPr protein (component of the phosphoenolpyruvate-dependent sugarphosphotransferase system) 32 58.21 -1 35987..36388 - 133 86355701 - RHE_CH00033 - protein-N(pi)-phosphohistidine-sugar phosphotransferase protein (component of thephosphoenolpyruvate-dependent sugar phosphotransferasesystem) 33 63.61 0 36539..36898 - 119 86355702 - RHE_CH00034 - hypothetical protein 34 62.31 0 36985..38820 - 611 86355703 chvG RHE_CH00035 - two-component sensor histidine kinase protein 35 62.43 0 38852..39607 - 251 86355704 chvI RHE_CH00036 - two-component response regulator protein 36 63.63 0 39928..41538 + 536 86355705 pckA RHE_CH00037 - phosphoenolpyruvate carboxykinase 37 63.01 0 41647..42084 + 145 86355706 - RHE_CH00038 - hypothetical protein 38 62.91 0 42086..42697 + 203 86355707 alkB RHE_CH00039 - alkylated DNA repair protein 39 58.73 0 42712..43707 - 331 86355708 coaA RHE_CH00040 - pantothenate kinase 40 58.33 -1 43704..44027 - 107 86355709 hisE RHE_CH00041 - phosphoribosyl-ATP pyrophosphatase 41 63.50 0 44044..44832 - 262 86355710 hisF RHE_CH00042 - imidazole glycerol phosphate synthase subunit HisF 42 62.78 0 44833..45579 - 248 162329648 hisA RHE_CH00043 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 43 59.86 0 45586..46143 - 185 86355712 - RHE_CH00044 - hypothetical protein 44 62.67 0 46375..47025 - 216 86355713 hisH RHE_CH00045 - imidazole glycerol phosphate synthase subunit HisH 45 62.14 0 47028..47513 - 161 86355714 - RHE_CH00046 - hypothetical protein 46 60.92 0 47535..48143 - 202 86355715 hisB RHE_CH00047 - imidazoleglycerol-phosphate dehydratase 47 59.85 0 48319..48846 + 175 86355716 hslV RHE_CH00048 - ATP-dependent protease peptidase subunit 48 60.63 0 48952..50259 + 435 86355717 hslU RHE_CH00049 - ATP-dependent protease ATP-binding subunit 49 59.70 0 50448..51395 + 315 86355718 - RHE_CH00050 - hypothetical protein 50 60.58 0 51444..52856 + 470 86355719 - RHE_CH00051 - cytochrome p450 protein 51 60.27 0 52942..55113 + 723 86355720 glcB RHE_CH00052 - malate synthase G 52 62.72 0 55180..55863 - 227 86355721 - RHE_CH00053 - hypothetical protein 53 58.18 -1 56043..56537 + 164 86355722 - RHE_CH00054 - hypothetical protein 54 61.14 0 56550..57128 - 192 86355723 actR RHE_CH00055 - two-component response regulator protein 55 62.53 0 57199..58527 - 442 86355724 actS RHE_CH00056 - two-component sensor histidine kinase protein 56 66.55 +1 58549..61014 - 821 86355725 helO RHE_CH00057 - helicase protein 57 66.14 +1 61011..61958 - 315 86355726 ocdch1 RHE_CH00058 - ornithine cyclodeaminase 58 53.51 -2 70995..71777 + 260 86355727 - RHE_CH00066 - LuxR family transcriptional regulator 59 60.24 0 71888..72307 - 139 86355728 - RHE_CH00067 - hypothetical protein 60 60.41 0 72592..73614 + 340 86355729 - RHE_CH00068 - dTDP-glucose 4,6-dehydratase protein 61 62.80 0 73616..74599 + 327 86355730 galE1 RHE_CH00069 - UDP-glucose 4-epimerase protein 62 62.97 0 74596..76464 + 622 86355731 - RHE_CH00070 - cellulose synthase protein 63 60.69 0 76501..77019 + 172 86355732 - RHE_CH00071 - hypothetical protein 64 61.52 0 77023..77994 + 323 86355733 - RHE_CH00072 - putative cellulase H precursor protein 65 60.99 0 78151..79437 - 428 86355734 - RHE_CH00073 - sugar ABC transporter, substrate-binding protein 66 64.72 0 79584..80612 + 342 86355735 - RHE_CH00074 - LacI family transcription regulator 67 62.41 0 80622..82478 + 618 86355736 - RHE_CH00075 - hypothetical protein 68 64.79 0 82475..83485 + 336 86355737 - RHE_CH00076 - D-2-hydroxyacid dehydrogenase protein 69 60.17 0 83509..84786 - 425 86355738 - RHE_CH00077 - putative oxidoreducatse protein 70 63.78 0 84832..85662 - 276 86355739 - RHE_CH00078 - putative endonuclease protein 71 64.26 0 85691..86854 - 387 86355740 - RHE_CH00079 - hypothetical protein 72 64.49 0 86858..88006 - 382 86355741 - RHE_CH00080 - putative oxidoreductase protein 73 61.21 0 88137..88814 - 225 86355742 - RHE_CH00081 - TetR family transcriptional regulator 74 61.38 0 89079..90365 + 428 86355743 - RHE_CH00082 - sugar ABC transporter, substrate-binding protein 75 60.65 0 90384..91331 + 315 86355744 - RHE_CH00083 - sugar ABC transporter, permease protein 76 59.57 0 91324..92211 + 295 86355745 - RHE_CH00084 - sugar ABC transporter, permease protein 77 62.01 0 92235..93308 + 357 86355746 - RHE_CH00085 - oxidoreductase protein 78 61.93 0 93339..94415 + 358 86355747 - RHE_CH00086 - sugar ABC transporter, ATP binding protein 79 60.62 0 94515..95390 + 291 86355748 - RHE_CH00087 - putative choline kinase protein 80 62.26 0 95391..97841 + 816 86355749 - RHE_CH00088 - glycine cleavage system T protein 81 64.61 0 98109..99566 - 485 86355750 uxuB RHE_CH00089 - D-mannonate oxidoreductase protein 82 63.56 0 99563..100978 - 471 86355751 uxaC RHE_CH00090 - glucuronate isomerase 83 57.14 -1 101158..101367 + 69 162329647 - RHE_CH00091 - hypothetical protein 84 64.78 0 101411..102895 - 494 86355753 gabDch RHE_CH00092 - succinate-semialdehyde dehydrogenase protein 85 63.31 0 102958..104238 - 426 86355754 gabT RHE_CH00093 - 4-aminobutyrate aminotransferase 86 65.56 +1 104403..105212 + 269 86355755 - RHE_CH00094 - MerR family transcriptional regulator 87 62.68 0 105297..105923 + 208 86355756 rnd1 RHE_CH00095 - RNAse D protein 88 64.49 0 106148..107665 + 505 86355757 - RHE_CH00096 - hypothetical protein 89 60.45 0 107742..109445 - 567 86355758 rpsA RHE_CH00097 - 30S ribosomal protein S1 90 61.65 0 109619..110395 - 258 86355759 cmk RHE_CH00098 - cytidylate kinase 91 57.03 -1 110650..111033 + 127 86355760 - RHE_CH00099 - hypothetical protein 92 61.18 0 111780..112016 - 78 86355761 - RHE_CH00101 - hypothetical protein 93 64.59 0 112252..112974 + 240 86355762 - RHE_CH00102 - hypothetical protein 94 61.22 0 113042..113830 + 262 86355763 - RHE_CH00103 - hypothetical protein 95 57.17 -1 113833..114306 - 157 86355764 - RHE_CH00104 - hypothetical protein 96 63.68 0 114422..115057 + 211 86355765 - RHE_CH00105 - hypothetical protein 97 63.10 0 115178..115597 - 139 86355766 irr RHE_CH00106 - iron transcriptional regulator protein 98 61.82 0 115899..116414 + 171 86355767 fabA RHE_CH00107 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 99 61.39 0 116460..117692 + 410 86355768 fabB RHE_CH00108 - 3-oxoacyl-(acyl carrier protein) synthase I 100 63.07 0 117697..118503 + 268 86355769 fabI1 RHE_CH00109 - enoyl-(acyl carrier protein) reductase 101 66.18 +1 118600..119616 - 338 86355770 - RHE_CH00110 - rRNA (guanine-N2-)-methyltransferase, small subunit protein 102 61.80 0 119692..121830 - 712 86355771 pnp RHE_CH00111 - polynucleotide phosphorylase/polyadenylase 103 55.56 -1 122180..122449 - 89 86355772 rpsO RHE_CH00112 - 30S ribosomal protein S15 104 59.27 0 122600..123451 - 283 86355773 - RHE_CH00113 - putative hydrolase protein 105 63.24 0 123530..124462 - 310 86355774 truB RHE_CH00114 - tRNA pseudouridine synthase B 106 59.85 0 124475..124885 - 136 86355775 rbfA RHE_CH00115 - ribosome-binding factor A 107 65.03 +1 125036..127786 - 916 86355776 infB RHE_CH00116 - translation initiation factor IF-2 108 62.75 0 127889..128578 - 229 86355777 - RHE_CH00117 - hypothetical protein 109 61.30 0 128578..130179 - 533 86355778 nusA RHE_CH00118 - transcription elongation factor NusA 110 57.79 -1 130240..130836 - 198 86355779 - RHE_CH00119 - hypothetical protein 111 64.55 0 131018..132721 + 567 86355780 - RHE_CH00120 - putative ABC transporter, permease protein 112 62.28 0 132730..133185 + 151 86355781 - RHE_CH00121 - acetyltransferase protein 113 61.99 0 133192..134430 - 412 86355782 - RHE_CH00122 - transglycosylase protein 114 64.36 0 134442..135047 - 201 86355783 recR RHE_CH00123 - recombination protein RecR 115 59.67 0 135066..135722 + 218 86355784 - RHE_CH00124 - hypothetical protein 116 62.96 0 135993..136316 - 107 86355785 - RHE_CH00125 - hypothetical protein 117 65.28 +1 136339..138213 - 624 86355786 dnaX RHE_CH00126 - DNA polymerase III subunits gamma and tau 118 59.85 0 138445..138855 + 136 86355787 - RHE_CH00127 - hypothetical protein 119 62.08 0 138852..139811 + 319 86355788 - RHE_CH00128 - MutT/NUDIX family NTP pyrophosphohydrolase 120 64.80 0 139816..140511 + 231 86355789 - RHE_CH00129 - transcriptional regulator protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.