version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3934 53.98 -2 4260700..4261038 + 112 86359603 fdxA RHE_CH04024 - ferredoxin III protein 3935 56.02 -1 4261433..4262005 + 190 86359604 - RHE_CH04025 - CarD family transcriptional regulator 3936 62.50 0 4262380..4263243 + 287 86359605 rpoH2 RHE_CH04026 - RNA polymerase factor sigma-32 3937 63.88 0 4263295..4264836 - 513 86359606 - RHE_CH04027 - putative metalloprotease protein 3938 63.27 0 4265229..4266761 - 510 86359607 - RHE_CH04028 - putative transporter, permease protein 3939 65.30 +1 4266966..4267403 + 145 86359608 - RHE_CH04029 - MarR family transcriptional regulator 3940 64.21 0 4267476..4268126 + 216 86359609 - RHE_CH04030 - hypothetical protein 3941 63.87 0 4268130..4269950 + 606 86359610 - RHE_CH04031 - putative ABC transporter, ATP-binding protein 3942 61.98 0 4270014..4271870 - 618 86359611 - RHE_CH04032 - ABC transporter permease/ATP-binding protein 3943 57.34 -1 4272216..4273073 + 285 86359612 metA RHE_CH04033 - homoserine O-succinyltransferase 3944 62.27 0 4273192..4274214 + 340 86359613 galM RHE_CH04034 - aldose-1-epimerase protein 3945 64.06 0 4274317..4275123 + 268 86359614 - RHE_CH04035 - GntR family transcriptional regulator 3946 65.31 +1 4275116..4276147 + 343 86359615 glmS2 RHE_CH04036 - glucosamine--fructose-6-phosphate aminotransferase protein 3947 65.89 +1 4276147..4277298 + 383 86359616 nagA RHE_CH04037 - n-acetylglucosamine-6-phosphate deacetylase protein 3948 64.06 0 4277316..4278044 + 242 86359617 - RHE_CH04038 - hypothetical protein 3949 58.74 0 4278067..4278495 - 142 86359618 - RHE_CH04039 - hypothetical protein 3950 61.75 0 4278670..4279239 - 189 86359619 efp RHE_CH04040 - elongation factor P 3951 64.60 0 4279388..4280449 + 353 86359620 genX RHE_CH04041 - lysyl-tRNA synthetase protein 3952 62.57 0 4280446..4281495 + 349 86359621 kamA RHE_CH04042 - L-lysine 2,3-aminomutase protein 3953 57.14 -1 4281761..4282012 + 83 86359622 - RHE_CH04043 - acyl carrier protein 3954 61.25 0 4282012..4283193 + 393 86359623 acd2 RHE_CH04044 - acyl-CoA dehydrogenase protein 3955 61.39 0 4283198..4284106 + 302 86359624 - RHE_CH04045 - hypothetical protein 3956 60.64 0 4284115..4285077 + 320 86359625 - RHE_CH04046 - hypothetical protein 3957 63.36 0 4285094..4287574 + 826 86359626 manB3 RHE_CH04047 - beta-mannosidase protein 3958 61.24 0 4287616..4288794 + 392 86359627 - RHE_CH04048 - putative glycosyltransferase protein 3959 64.22 0 4288931..4292194 + 1087 86359628 - RHE_CH04049 - hypothetical protein 3960 62.51 0 4292217..4293395 - 392 86359629 aceC RHE_CH04050 - cellobiosyl-diphosphoprenyl alpha-mannosyltransferase protein 3961 55.70 -1 4293537..4293773 - 78 86359630 - RHE_CH04051 - putative transcriptional regulator protein 3962 65.57 +1 4293842..4294750 - 302 86359631 - RHE_CH04052 - LysR family transcriptional regulator 3963 64.69 0 4294854..4296266 + 470 86359632 - RHE_CH04053 - hypothetical protein 3964 65.50 +1 4296334..4297617 + 427 86359633 - RHE_CH04054 - oxidoreductase protein 3965 65.24 +1 4297643..4299181 + 512 86359634 - RHE_CH04055 - aldehyde dehydrogenase 3966 60.51 0 4299369..4300391 + 340 86359635 sfuA RHE_CH04056 - iron(III) ABC transporter, substrate-binding protein 3967 64.27 0 4300495..4302162 + 555 86359636 sfuB RHE_CH04057 - iron(III) ABC transporter, permease protein 3968 66.38 +1 4302159..4303196 + 345 86359637 sfuC RHE_CH04058 - iron(III) ABC transporter, ATP-binding protein 3969 62.16 0 4303232..4304563 - 443 86359638 - RHE_CH04059 - hypothetical protein 3970 63.69 0 4304967..4306409 - 480 86359639 - RHE_CH04060 - hypothetical protein 3971 60.69 0 4307166..4307483 + 105 86359640 rplU RHE_CH04062 - 50S ribosomal protein L21 3972 59.26 0 4307518..4307787 + 89 86359641 rpmA RHE_CH04063 - 50S ribosomal protein L27 3973 61.19 0 4307913..4308569 + 218 86359642 - RHE_CH04064 - putative acetyltransferase protein 3974 65.99 +1 4308566..4309153 + 195 86359643 - RHE_CH04065 - putative acetyltransferase protein 3975 62.78 0 4309248..4309967 - 239 86359644 - RHE_CH04066 - putative endonuclease/exonuclease/phosphatase protein 3976 62.18 0 4310199..4311290 + 363 86359645 obgE RHE_CH04067 - GTPase ObgE 3977 67.18 +1 4311277..4312446 + 389 86359646 proB RHE_CH04068 - gamma-glutamyl kinase 3978 63.86 0 4312439..4313722 + 427 86359647 proA RHE_CH04069 - gamma-glutamyl phosphate reductase 3979 64.59 0 4313781..4314359 + 192 86359648 nadD RHE_CH04070 - nicotinic acid mononucleotide adenylyltransferase 3980 62.37 0 4314798..4315589 + 263 86359649 modA RHE_CH04071 - molybdenum ABC transporter, substrate-binding protein 3981 64.48 0 4315825..4316556 + 243 86359650 modB RHE_CH04072 - molybdate ABC transporter permease protein 3982 63.58 0 4316553..4317620 + 355 86359651 modC RHE_CH04073 - molybdenum ABC transporter, ATP-binding protein 3983 63.23 0 4317621..4317998 - 125 86359652 modE RHE_CH04074 - molybdenum-binding transcriptional regulator-repressor protein (molybdenum transport associatedprotein) 3984 56.44 -1 4318202..4318651 + 149 86359653 - RHE_CH04075 - hypothetical protein 3985 62.94 0 4318768..4319250 + 160 86359654 - RHE_CH04076 - SPOUT methyltransferase superfamily protein 3986 64.81 +1 4319430..4320830 + 466 86359655 - RHE_CH04077 - putative metalloendopeptidase protein 3987 62.73 0 4320874..4322142 + 422 86359656 ctpA RHE_CH04078 - C-terminal processing peptidase protein 3988 64.73 0 4322282..4323415 + 377 86359657 - RHE_CH04079 - hypothetical protein 3989 62.36 0 4323441..4323974 + 177 86359658 ialA RHE_CH04080 - dinucleoside polyphosphate hydrolase 3990 54.90 -2 4324023..4324532 - 169 86359659 bfr RHE_CH04081 - bacterioferritin protein 3991 50.91 -2 4324474..4324803 - 109 86359660 - RHE_CH04082 - hypothetical protein 3992 58.76 0 4324967..4328419 - 1150 86359661 dnaEch2 RHE_CH04083 - DNA polymerase III alpha subunit protein 3993 61.71 0 4328419..4330032 - 537 86359662 - RHE_CH04084 - putative nucleotidyltransferase protein 3994 64.66 0 4329878..4330822 - 314 86359663 - RHE_CH04085 - hypothetical protein 3995 58.68 0 4330986..4331423 + 145 86359664 - RHE_CH04086 - hypothetical protein 3996 59.90 0 4331446..4331652 - 68 86359665 - RHE_CH04087 - hypothetical protein 3997 60.26 0 4331652..4332557 - 301 86359666 citEch RHE_CH04088 - citrate lyase, beta subunit protein 3998 60.26 0 4332670..4332903 + 77 86359667 - RHE_CH04089 - hypothetical protein 3999 60.24 0 4333010..4333429 + 139 86359668 - RHE_CH04090 - hypothetical protein 4000 58.29 -1 4333563..4334171 + 202 86359669 leuD RHE_CH04091 - isopropylmalate isomerase small subunit 4001 65.17 +1 4334234..4335166 - 310 86359670 - RHE_CH04092 - putative L-serine dehydratase protein 4002 63.70 0 4335410..4336522 + 370 86359671 leuB RHE_CH04093 - 3-isopropylmalate dehydrogenase 4003 60.37 0 4336751..4337449 + 232 86359672 - RHE_CH04094 - putative phosphatase protein 4004 61.84 0 4337491..4339377 - 628 86359673 - RHE_CH04095 - putative transporter, permease protein 4005 64.86 +1 4339619..4340890 - 423 86359674 - RHE_CH04096 - hypothetical protein 4006 65.37 +1 4340887..4341579 - 230 86359675 - RHE_CH04097 - putative ABC transporter, ATP-binding protein 4007 61.90 0 4341585..4342046 - 153 86359676 - RHE_CH04098 - hypothetical protein 4008 60.06 0 4342140..4343894 - 584 86359677 phoA RHE_CH04099 - alkaline phosphatase protein 4009 60.68 0 4344306..4345340 + 344 86359678 asd RHE_CH04100 - aspartate-semialdehyde dehydrogenase 4010 63.52 0 4345511..4346335 + 274 86359679 - RHE_CH04101 - putative membrane-bound lytic murein transglycosylase protein 4011 61.36 0 4346390..4348009 - 539 86359680 - RHE_CH04102 - putative cellulose biosynthesis transcriptional regulator protein 4012 59.03 0 4348100..4348741 - 213 86359681 cynT RHE_CH04103 - carbonic anhydrase protein 4013 64.84 +1 4348800..4349675 + 291 86359682 pdxK RHE_CH04104 - pyridoxal kinase protein 4014 63.11 0 4349966..4354741 + 1591 86359683 - RHE_CH04105 - putative NAD-specific glutamate dehydrogenase protein 4015 62.71 0 4354765..4356153 + 462 86359684 - RHE_CH04106 - hypothetical protein 4016 62.15 0 4356166..4357782 - 538 86359685 purH RHE_CH04107 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4017 61.31 0 4357988..4359631 - 547 86359686 - RHE_CH04108 - hypothetical protein 4018 65.59 +1 4359862..4361256 - 464 86359687 - RHE_CH04109 - RNA methyltransferase - sun protein 4019 61.13 0 4361253..4362209 - 318 86359688 htpX2 RHE_CH04110 - heat shock protein HtpX 4020 66.22 +1 4362320..4362544 + 74 86359689 - RHE_CH04111 - hypothetical protein 4021 60.69 0 4362703..4364658 - 651 86359690 acsA2 RHE_CH04112 - acetyl-CoA synthetase 4022 62.96 0 4364887..4365588 + 233 86359691 - RHE_CH04113 - hypothetical protein 4023 63.42 0 4365855..4367765 - 636 86359692 - RHE_CH04114 - propionate-CoA ligase protein 4024 63.94 0 4367848..4368507 - 219 86359693 - RHE_CH04115 - hypothetical protein 4025 61.73 0 4368710..4371340 + 876 86359694 leuS RHE_CH04116 - leucyl-tRNA synthetase 4026 62.45 0 4371366..4371839 + 157 86359695 - RHE_CH04117 - hypothetical protein 4027 58.12 -1 4371850..4372890 + 346 86359696 holA RHE_CH04118 - DNA polymerase III subunit delta 4028 58.28 -1 4372891..4373772 - 293 86359697 parB RHE_CH04119 - chromosome partitioning protein B 4029 57.61 -1 4373805..4374599 - 264 86359698 parA2 RHE_CH04120 - chromosome partitioning protein A 4030 54.69 -2 4374619..4375236 - 205 86359699 gidB RHE_CH04121 - glucose-inhibited division protein B 4031 60.45 0 4375239..4377137 - 632 86359700 gidA2 RHE_CH04122 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4032 58.46 0 4377208..4378584 - 458 86359701 trmE RHE_CH04123 - tRNA modification GTPase TrmE 4033 57.50 -1 4378630..4379895 - 421 86359702 rho RHE_CH04124 - transcription termination factor Rho 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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