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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3899 58.30 -1 4212942..4214483 + 513 86359568 - RHE_CH03989 - sugar ABC transporter, ATP-binding protein 3900 60.72 0 4214518..4215543 + 341 86359569 - RHE_CH03990 - sugar ABC transporter, permease protein 3901 63.08 0 4215711..4216769 + 352 86359570 - RHE_CH03991 - putative membrane dipeptidase protein 3902 57.85 -1 4216868..4218511 + 547 86359571 dppAch3 RHE_CH03992 - dipeptide ABC transporter, substrate-binding protein 3903 62.17 0 4218530..4219597 + 355 86359572 dppBch3 RHE_CH03993 - dipeptide ABC transporter, permease protein 3904 65.67 +1 4219624..4220529 + 301 86359573 dppCch3 RHE_CH03994 - dipeptide ABC transporter, permease protein 3905 63.19 0 4220526..4221359 + 277 86359574 dppDch3 RHE_CH03995 - dipeptide ABC transporter, ATP-binding protein 3906 61.20 0 4221356..4222105 + 249 86359575 dppFch3 RHE_CH03996 - dipeptide ABC transporter, ATP-binding protein 3907 62.96 0 4223237..4231714 + 2825 86359576 ndvB RHE_CH03997 - beta-1,2-glucan production associated transmembrane protein 3908 59.97 0 4231817..4233055 + 412 86359577 - RHE_CH03998 - putative protein require for succinylation of osmoregulated periplasmic glucans 3909 57.06 -1 4233183..4233536 - 117 86359578 - RHE_CH03999 - lactoylglutathione lyase protein 3910 61.73 0 4233809..4235590 - 593 86359579 ndvA RHE_CH04000 - cyclic beta-1,2-glucan ABC transporter 3911 58.07 -1 4235959..4236714 + 251 86359580 - RHE_CH04001 - LuxR family transcriptional regulator 3912 62.71 0 4236888..4240352 + 1154 86359581 pyc RHE_CH04002 - pyruvate carboxylase 3913 58.99 0 4240541..4241113 + 190 86359582 - RHE_CH04003 - putative reductase protein 3914 61.61 0 4241170..4241802 - 210 86359583 - RHE_CH04004 - amino acid ABC transporter ATP-binding protein 3915 63.18 0 4241928..4242587 - 219 86359584 - RHE_CH04005 - amino acid ABC transporter permease 3916 59.04 0 4242808..4243581 - 257 86359585 - RHE_CH04006 - amino acid ABC transporter substrate-binding protein 3917 66.10 +1 4243913..4244623 + 236 86359586 - RHE_CH04007 - DeoR family transcriptional regulator 3918 62.52 0 4244773..4245882 + 369 86359587 - RHE_CH04008 - putative transporter, permease protein 3919 63.15 0 4245979..4247229 + 416 86359588 ispG RHE_CH04009 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3920 61.58 0 4247246..4248307 + 353 86359589 hisCch3 RHE_CH04010 - histidinol-phosphate aminotransferase 3921 65.96 +1 4248316..4249311 - 331 86359590 ispA RHE_CH04011 - geranyltranstransferase protein 3922 60.97 0 4249403..4250104 + 233 86359591 mtgA RHE_CH04012 - monofunctional biosynthetic peptidoglycan transglycosylase 3923 61.27 0 4250200..4250922 + 240 86359592 - RHE_CH04013 - hypothetical protein 3924 61.11 0 4250937..4251584 + 215 86359593 - RHE_CH04014 - glutathione S-transferase protein 3925 60.22 0 4251739..4251924 + 61 86359594 rpmF RHE_CH04015 - 50S ribosomal protein L32 3926 55.88 -1 4252067..4252474 + 135 86359595 - RHE_CH04016 - hypothetical protein 3927 56.25 -1 4252469..4253044 - 191 86359596 aniA RHE_CH04017 - carbon flux regulator protein 3928 65.40 +1 4253282..4254463 + 393 86359597 phbAch RHE_CH04018 - acetyl-CoA acetyltransferase 3929 58.82 0 4254535..4255260 + 241 86359598 phbB RHE_CH04019 - acetoacetyl-CoA reductase protein 3930 56.86 -1 4255267..4255419 + 50 86359599 - RHE_CH04020 - hypothetical protein 3931 67.82 +1 4255670..4255930 - 86 86359600 - RHE_CH04021 - hypothetical protein 3932 64.10 0 4256943..4260101 + 1052 86359601 mgpS RHE_CH04022 - ATP-dependent DNA helicase protein 3933 63.70 0 4260104..4260508 + 134 86359602 - RHE_CH04023 - putative heat shock protein (ribosome-associated) 3934 53.98 -2 4260700..4261038 + 112 86359603 fdxA RHE_CH04024 - ferredoxin III protein 3935 56.02 -1 4261433..4262005 + 190 86359604 - RHE_CH04025 - CarD family transcriptional regulator 3936 62.50 0 4262380..4263243 + 287 86359605 rpoH2 RHE_CH04026 - RNA polymerase factor sigma-32 3937 63.88 0 4263295..4264836 - 513 86359606 - RHE_CH04027 - putative metalloprotease protein 3938 63.27 0 4265229..4266761 - 510 86359607 - RHE_CH04028 - putative transporter, permease protein 3939 65.30 +1 4266966..4267403 + 145 86359608 - RHE_CH04029 - MarR family transcriptional regulator 3940 64.21 0 4267476..4268126 + 216 86359609 - RHE_CH04030 - hypothetical protein 3941 63.87 0 4268130..4269950 + 606 86359610 - RHE_CH04031 - putative ABC transporter, ATP-binding protein 3942 61.98 0 4270014..4271870 - 618 86359611 - RHE_CH04032 - ABC transporter permease/ATP-binding protein 3943 57.34 -1 4272216..4273073 + 285 86359612 metA RHE_CH04033 - homoserine O-succinyltransferase 3944 62.27 0 4273192..4274214 + 340 86359613 galM RHE_CH04034 - aldose-1-epimerase protein 3945 64.06 0 4274317..4275123 + 268 86359614 - RHE_CH04035 - GntR family transcriptional regulator 3946 65.31 +1 4275116..4276147 + 343 86359615 glmS2 RHE_CH04036 - glucosamine--fructose-6-phosphate aminotransferase protein 3947 65.89 +1 4276147..4277298 + 383 86359616 nagA RHE_CH04037 - n-acetylglucosamine-6-phosphate deacetylase protein 3948 64.06 0 4277316..4278044 + 242 86359617 - RHE_CH04038 - hypothetical protein 3949 58.74 0 4278067..4278495 - 142 86359618 - RHE_CH04039 - hypothetical protein 3950 61.75 0 4278670..4279239 - 189 86359619 efp RHE_CH04040 - elongation factor P 3951 64.60 0 4279388..4280449 + 353 86359620 genX RHE_CH04041 - lysyl-tRNA synthetase protein 3952 62.57 0 4280446..4281495 + 349 86359621 kamA RHE_CH04042 - L-lysine 2,3-aminomutase protein 3953 57.14 -1 4281761..4282012 + 83 86359622 - RHE_CH04043 - acyl carrier protein 3954 61.25 0 4282012..4283193 + 393 86359623 acd2 RHE_CH04044 - acyl-CoA dehydrogenase protein 3955 61.39 0 4283198..4284106 + 302 86359624 - RHE_CH04045 - hypothetical protein 3956 60.64 0 4284115..4285077 + 320 86359625 - RHE_CH04046 - hypothetical protein 3957 63.36 0 4285094..4287574 + 826 86359626 manB3 RHE_CH04047 - beta-mannosidase protein 3958 61.24 0 4287616..4288794 + 392 86359627 - RHE_CH04048 - putative glycosyltransferase protein 3959 64.22 0 4288931..4292194 + 1087 86359628 - RHE_CH04049 - hypothetical protein 3960 62.51 0 4292217..4293395 - 392 86359629 aceC RHE_CH04050 - cellobiosyl-diphosphoprenyl alpha-mannosyltransferase protein 3961 55.70 -1 4293537..4293773 - 78 86359630 - RHE_CH04051 - putative transcriptional regulator protein 3962 65.57 +1 4293842..4294750 - 302 86359631 - RHE_CH04052 - LysR family transcriptional regulator 3963 64.69 0 4294854..4296266 + 470 86359632 - RHE_CH04053 - hypothetical protein 3964 65.50 +1 4296334..4297617 + 427 86359633 - RHE_CH04054 - oxidoreductase protein 3965 65.24 +1 4297643..4299181 + 512 86359634 - RHE_CH04055 - aldehyde dehydrogenase 3966 60.51 0 4299369..4300391 + 340 86359635 sfuA RHE_CH04056 - iron(III) ABC transporter, substrate-binding protein 3967 64.27 0 4300495..4302162 + 555 86359636 sfuB RHE_CH04057 - iron(III) ABC transporter, permease protein 3968 66.38 +1 4302159..4303196 + 345 86359637 sfuC RHE_CH04058 - iron(III) ABC transporter, ATP-binding protein 3969 62.16 0 4303232..4304563 - 443 86359638 - RHE_CH04059 - hypothetical protein 3970 63.69 0 4304967..4306409 - 480 86359639 - RHE_CH04060 - hypothetical protein 3971 60.69 0 4307166..4307483 + 105 86359640 rplU RHE_CH04062 - 50S ribosomal protein L21 3972 59.26 0 4307518..4307787 + 89 86359641 rpmA RHE_CH04063 - 50S ribosomal protein L27 3973 61.19 0 4307913..4308569 + 218 86359642 - RHE_CH04064 - putative acetyltransferase protein 3974 65.99 +1 4308566..4309153 + 195 86359643 - RHE_CH04065 - putative acetyltransferase protein 3975 62.78 0 4309248..4309967 - 239 86359644 - RHE_CH04066 - putative endonuclease/exonuclease/phosphatase protein 3976 62.18 0 4310199..4311290 + 363 86359645 obgE RHE_CH04067 - GTPase ObgE 3977 67.18 +1 4311277..4312446 + 389 86359646 proB RHE_CH04068 - gamma-glutamyl kinase 3978 63.86 0 4312439..4313722 + 427 86359647 proA RHE_CH04069 - gamma-glutamyl phosphate reductase 3979 64.59 0 4313781..4314359 + 192 86359648 nadD RHE_CH04070 - nicotinic acid mononucleotide adenylyltransferase 3980 62.37 0 4314798..4315589 + 263 86359649 modA RHE_CH04071 - molybdenum ABC transporter, substrate-binding protein 3981 64.48 0 4315825..4316556 + 243 86359650 modB RHE_CH04072 - molybdate ABC transporter permease protein 3982 63.58 0 4316553..4317620 + 355 86359651 modC RHE_CH04073 - molybdenum ABC transporter, ATP-binding protein 3983 63.23 0 4317621..4317998 - 125 86359652 modE RHE_CH04074 - molybdenum-binding transcriptional regulator-repressor protein (molybdenum transport associatedprotein) 3984 56.44 -1 4318202..4318651 + 149 86359653 - RHE_CH04075 - hypothetical protein 3985 62.94 0 4318768..4319250 + 160 86359654 - RHE_CH04076 - SPOUT methyltransferase superfamily protein 3986 64.81 +1 4319430..4320830 + 466 86359655 - RHE_CH04077 - putative metalloendopeptidase protein 3987 62.73 0 4320874..4322142 + 422 86359656 ctpA RHE_CH04078 - C-terminal processing peptidase protein 3988 64.73 0 4322282..4323415 + 377 86359657 - RHE_CH04079 - hypothetical protein 3989 62.36 0 4323441..4323974 + 177 86359658 ialA RHE_CH04080 - dinucleoside polyphosphate hydrolase 3990 54.90 -2 4324023..4324532 - 169 86359659 bfr RHE_CH04081 - bacterioferritin protein 3991 50.91 -2 4324474..4324803 - 109 86359660 - RHE_CH04082 - hypothetical protein 3992 58.76 0 4324967..4328419 - 1150 86359661 dnaEch2 RHE_CH04083 - DNA polymerase III alpha subunit protein 3993 61.71 0 4328419..4330032 - 537 86359662 - RHE_CH04084 - putative nucleotidyltransferase protein 3994 64.66 0 4329878..4330822 - 314 86359663 - RHE_CH04085 - hypothetical protein 3995 58.68 0 4330986..4331423 + 145 86359664 - RHE_CH04086 - hypothetical protein 3996 59.90 0 4331446..4331652 - 68 86359665 - RHE_CH04087 - hypothetical protein 3997 60.26 0 4331652..4332557 - 301 86359666 citEch RHE_CH04088 - citrate lyase, beta subunit protein 3998 60.26 0 4332670..4332903 + 77 86359667 - RHE_CH04089 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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