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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3845 58.17 -1 4163574..4163879 - 101 86359514 phhB RHE_CH03934 - pterin-4-alpha-carbinolamine dehydratase 3846 61.68 0 4163915..4164415 + 166 86359515 - RHE_CH03935 - tyrosine phosphatase protein 3847 61.62 0 4164322..4164915 - 197 86359516 ligT RHE_CH03936 - 2`-5` RNA ligase protein 3848 59.74 0 4164984..4165517 - 177 86359517 tesA RHE_CH03937 - acyl-CoA thioesterase protein 3849 62.99 0 4165701..4166408 + 235 86359518 - RHE_CH03938 - putative ABC transporter, ATP-binding protein (involved in lysophospholipase L1 biosynthesis) 3850 65.37 +1 4166411..4168948 + 845 86359519 - RHE_CH03939 - putative ABC transporter, permease protein (involved in lysophospholipase L1 biosynthesis) 3851 59.95 0 4169130..4169858 + 242 86359520 - RHE_CH03940 - hypothetical protein 3852 63.62 0 4169965..4170522 + 185 86359521 - RHE_CH03941 - putative phosphinothricin N-acetyltransferase (antibiotic resistance) protein 3853 57.21 -1 4170529..4170930 - 133 86359522 - RHE_CH03942 - hypothetical protein 3854 59.51 0 4171244..4171984 - 246 86359523 - RHE_CH03943 - hypothetical protein 3855 61.35 0 4172217..4174907 - 896 86359524 acnA RHE_CH03944 - aconitate hydratase 3856 59.37 0 4175214..4175816 + 200 86359525 ccmA RHE_CH03945 - cytochrome c biogenesis protein CcmA 3857 63.75 0 4175816..4176055 + 79 86359526 - RHE_CH03946 - hypothetical protein 3858 67.27 +1 4176052..4176711 + 219 86359527 ccmB RHE_CH03947 - heme ABC transporter, permease protein (involved in cytochrome-c biogenesis) 3859 64.30 0 4176759..4177520 + 253 86359528 ccmC RHE_CH03948 - heme ABC transporter, permease protein (involved in cytochrome-c biogenesis) 3860 70.83 +2 4177524..4177691 + 55 86359529 cycX RHE_CH03949 - heme transporter protein (involved in cytochrome-c biogenesis) 3861 61.90 0 4177688..4178296 + 202 86359530 cycY RHE_CH03950 - thiol disulfide interchange protein (involved in cytochrome-c biogenesis) 3862 58.84 0 4178464..4179051 - 195 86359531 - RHE_CH03951 - hypothetical protein 3863 58.29 -1 4179048..4179692 - 214 86359532 ispZ RHE_CH03952 - intracellular septation protein A 3864 62.33 0 4179771..4181339 - 522 86359533 ftsY RHE_CH03953 - cell division protein 3865 63.60 0 4181356..4182627 - 423 86359534 - RHE_CH03954 - hypothetical protein 3866 64.57 0 4182624..4183529 - 301 86359535 dapF RHE_CH03955 - diaminopimelate epimerase 3867 58.82 0 4183642..4183845 - 67 86359536 - RHE_CH03956 - hypothetical protein 3868 65.08 +1 4184268..4185845 + 525 86359537 ffh RHE_CH03957 - signal recognition particle GTP-binding protein 3869 58.57 0 4185862..4186182 + 106 86359538 tyrA RHE_CH03958 - chorismate mutase 3870 64.23 0 4186231..4186599 + 122 86359539 rpsP RHE_CH03959 - 30S ribosomal protein S16 3871 59.48 0 4186629..4187282 + 217 86359540 rimM RHE_CH03960 - 16S rRNA-processing protein 3872 66.21 +1 4187321..4187983 + 220 86359541 trmD RHE_CH03961 - tRNA (guanine-N(1)-)-methyltransferase 3873 63.69 0 4188196..4188732 + 178 86359542 rplS RHE_CH03962 - 50S ribosomal protein L19 3874 58.65 0 4188871..4189668 + 265 86359543 - RHE_CH03963 - putative amino acid ABC transporter, substrate-binding protein 3875 59.71 0 4189684..4190502 + 272 86359544 - RHE_CH03964 - putative amino acid ABC transporter, permease protein 3876 62.48 0 4190747..4192156 + 469 86359545 leuC RHE_CH03965 - isopropylmalate isomerase large subunit 3877 59.49 0 4192263..4193168 - 301 86359546 - RHE_CH03966 - aldo/keto reductase family oxidoreductase 3878 64.75 0 4193225..4193746 - 173 86359547 - RHE_CH03967 - hypothetical protein 3879 60.53 0 4193915..4194598 + 227 86359548 - RHE_CH03968 - putative two-component response regulator protein 3880 64.25 0 4194737..4195192 + 151 86359549 - RHE_CH03969 - putative cAMP-dependent kinase protein 3881 60.82 0 4195199..4196002 - 267 86359550 xthA3 RHE_CH03970 - exodeoxyribonuclease III protein 3882 60.39 0 4196105..4196773 - 222 86359551 - RHE_CH03971 - putative outer membrane lipoproteins carrier protein 3883 63.61 0 4196913..4199597 - 894 86359552 ftsK2 RHE_CH03972 - cell division protein 3884 62.39 0 4199846..4201273 - 475 86359553 amtB RHE_CH03973 - ammonium transporter protein 3885 55.46 -1 4201301..4201639 - 112 86359554 glnK RHE_CH03974 - nitrogen regulatory protein P-II 3886 62.82 0 4201862..4202746 - 294 86359555 tesB RHE_CH03975 - acyl-CoA thioesterase II protein 3887 63.95 0 4202831..4204045 + 404 86359556 - RHE_CH03976 - 2-octaprenyl-6-methoxyphenyl hydroxylase 3888 58.20 -1 4204061..4204249 - 62 86359557 - RHE_CH03977 - hypothetical protein 3889 63.46 0 4204259..4204945 - 228 86359558 lonD RHE_CH03978 - ATP-dependent protease LA 2 protein 3890 63.28 0 4205020..4205994 - 324 86359559 trxA2 RHE_CH03979 - thioredoxin protein 3891 56.61 -1 4206051..4206716 - 221 86359560 - RHE_CH03980 - hypothetical protein 3892 54.79 -2 4206933..4207235 - 100 86359561 - RHE_CH03982 - putative insertion sequence transposase protein 3893 61.96 0 4207283..4207537 + 84 86359562 - RHE_CH03983 - hypothetical protein 3894 63.41 0 4207600..4208244 - 214 86359563 - RHE_CH03984 - hypothetical protein 3895 60.98 0 4208473..4209456 + 327 86359564 galE3 RHE_CH03985 - UDP-glucose 4-epimerase protein 3896 62.06 0 4209434..4210996 + 520 86359565 - RHE_CH03986 - sulfatase (sulfuric ester hydrolase) protein 3897 62.25 0 4211079..4211576 - 165 86359566 - RHE_CH03987 - hypothetical protein 3898 60.00 0 4211943..4212872 + 309 86359567 mocBch2 RHE_CH03988 - rhizopine ABC transporter, substrate-binding protein 3899 58.30 -1 4212942..4214483 + 513 86359568 - RHE_CH03989 - sugar ABC transporter, ATP-binding protein 3900 60.72 0 4214518..4215543 + 341 86359569 - RHE_CH03990 - sugar ABC transporter, permease protein 3901 63.08 0 4215711..4216769 + 352 86359570 - RHE_CH03991 - putative membrane dipeptidase protein 3902 57.85 -1 4216868..4218511 + 547 86359571 dppAch3 RHE_CH03992 - dipeptide ABC transporter, substrate-binding protein 3903 62.17 0 4218530..4219597 + 355 86359572 dppBch3 RHE_CH03993 - dipeptide ABC transporter, permease protein 3904 65.67 +1 4219624..4220529 + 301 86359573 dppCch3 RHE_CH03994 - dipeptide ABC transporter, permease protein 3905 63.19 0 4220526..4221359 + 277 86359574 dppDch3 RHE_CH03995 - dipeptide ABC transporter, ATP-binding protein 3906 61.20 0 4221356..4222105 + 249 86359575 dppFch3 RHE_CH03996 - dipeptide ABC transporter, ATP-binding protein 3907 62.96 0 4223237..4231714 + 2825 86359576 ndvB RHE_CH03997 - beta-1,2-glucan production associated transmembrane protein 3908 59.97 0 4231817..4233055 + 412 86359577 - RHE_CH03998 - putative protein require for succinylation of osmoregulated periplasmic glucans 3909 57.06 -1 4233183..4233536 - 117 86359578 - RHE_CH03999 - lactoylglutathione lyase protein 3910 61.73 0 4233809..4235590 - 593 86359579 ndvA RHE_CH04000 - cyclic beta-1,2-glucan ABC transporter 3911 58.07 -1 4235959..4236714 + 251 86359580 - RHE_CH04001 - LuxR family transcriptional regulator 3912 62.71 0 4236888..4240352 + 1154 86359581 pyc RHE_CH04002 - pyruvate carboxylase 3913 58.99 0 4240541..4241113 + 190 86359582 - RHE_CH04003 - putative reductase protein 3914 61.61 0 4241170..4241802 - 210 86359583 - RHE_CH04004 - amino acid ABC transporter ATP-binding protein 3915 63.18 0 4241928..4242587 - 219 86359584 - RHE_CH04005 - amino acid ABC transporter permease 3916 59.04 0 4242808..4243581 - 257 86359585 - RHE_CH04006 - amino acid ABC transporter substrate-binding protein 3917 66.10 +1 4243913..4244623 + 236 86359586 - RHE_CH04007 - DeoR family transcriptional regulator 3918 62.52 0 4244773..4245882 + 369 86359587 - RHE_CH04008 - putative transporter, permease protein 3919 63.15 0 4245979..4247229 + 416 86359588 ispG RHE_CH04009 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3920 61.58 0 4247246..4248307 + 353 86359589 hisCch3 RHE_CH04010 - histidinol-phosphate aminotransferase 3921 65.96 +1 4248316..4249311 - 331 86359590 ispA RHE_CH04011 - geranyltranstransferase protein 3922 60.97 0 4249403..4250104 + 233 86359591 mtgA RHE_CH04012 - monofunctional biosynthetic peptidoglycan transglycosylase 3923 61.27 0 4250200..4250922 + 240 86359592 - RHE_CH04013 - hypothetical protein 3924 61.11 0 4250937..4251584 + 215 86359593 - RHE_CH04014 - glutathione S-transferase protein 3925 60.22 0 4251739..4251924 + 61 86359594 rpmF RHE_CH04015 - 50S ribosomal protein L32 3926 55.88 -1 4252067..4252474 + 135 86359595 - RHE_CH04016 - hypothetical protein 3927 56.25 -1 4252469..4253044 - 191 86359596 aniA RHE_CH04017 - carbon flux regulator protein 3928 65.40 +1 4253282..4254463 + 393 86359597 phbAch RHE_CH04018 - acetyl-CoA acetyltransferase 3929 58.82 0 4254535..4255260 + 241 86359598 phbB RHE_CH04019 - acetoacetyl-CoA reductase protein 3930 56.86 -1 4255267..4255419 + 50 86359599 - RHE_CH04020 - hypothetical protein 3931 67.82 +1 4255670..4255930 - 86 86359600 - RHE_CH04021 - hypothetical protein 3932 64.10 0 4256943..4260101 + 1052 86359601 mgpS RHE_CH04022 - ATP-dependent DNA helicase protein 3933 63.70 0 4260104..4260508 + 134 86359602 - RHE_CH04023 - putative heat shock protein (ribosome-associated) 3934 53.98 -2 4260700..4261038 + 112 86359603 fdxA RHE_CH04024 - ferredoxin III protein 3935 56.02 -1 4261433..4262005 + 190 86359604 - RHE_CH04025 - CarD family transcriptional regulator 3936 62.50 0 4262380..4263243 + 287 86359605 rpoH2 RHE_CH04026 - RNA polymerase factor sigma-32 3937 63.88 0 4263295..4264836 - 513 86359606 - RHE_CH04027 - putative metalloprotease protein 3938 63.27 0 4265229..4266761 - 510 86359607 - RHE_CH04028 - putative transporter, permease protein 3939 65.30 +1 4266966..4267403 + 145 86359608 - RHE_CH04029 - MarR family transcriptional regulator 3940 64.21 0 4267476..4268126 + 216 86359609 - RHE_CH04030 - hypothetical protein 3941 63.87 0 4268130..4269950 + 606 86359610 - RHE_CH04031 - putative ABC transporter, ATP-binding protein 3942 61.98 0 4270014..4271870 - 618 86359611 - RHE_CH04032 - ABC transporter permease/ATP-binding protein 3943 57.34 -1 4272216..4273073 + 285 86359612 metA RHE_CH04033 - homoserine O-succinyltransferase 3944 62.27 0 4273192..4274214 + 340 86359613 galM RHE_CH04034 - aldose-1-epimerase protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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