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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 327 67.91 +1 348982..350271 - 429 86355996 - RHE_CH00339 - cyanate transport protein 328 65.78 +1 350268..350945 - 225 86355997 - RHE_CH00340 - GntR family transcriptional regulator 329 64.21 0 351451..352263 + 270 86355998 - RHE_CH00341 - putative glutamine amidotransferase protein 330 65.34 +1 352386..353594 - 402 86355999 dfp RHE_CH00342 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 331 64.71 0 353753..354517 - 254 86356000 - RHE_CH00343 - short chain dehydrogenase 332 65.46 +1 354643..355554 + 303 86356001 - RHE_CH00344 - LysR family transcriptional regulator 333 65.05 +1 355693..356931 + 412 86356002 - RHE_CH00345 - putative transporter permease protein 334 58.40 -1 356928..357314 + 128 86356003 - RHE_CH00346 - putative biphenyl-2,3-diol 1,2-dioxygenase protein 335 64.08 0 357345..359006 - 553 86356004 hutUch RHE_CH00347 - urocanate hydratase 336 63.94 0 359077..359406 - 109 86356005 - RHE_CH00348 - hypothetical protein 337 64.52 0 359410..360480 - 356 86356006 - RHE_CH00349 - hypothetical protein 338 65.65 +1 360488..361768 - 426 86356007 - RHE_CH00350 - allantoate amidohydrolase 339 64.78 0 361765..363144 - 459 86356008 - RHE_CH00351 - allantoinase protein 340 66.16 +1 363281..364858 - 525 86356009 hutHch RHE_CH00352 - histidine ammonia-lyase protein 341 62.98 0 364949..366523 - 524 86356010 aarF RHE_CH00353 - ubiquinone biosynthesis protein 342 61.65 0 366574..367350 - 258 86356011 ubiE RHE_CH00354 - ubiquinone/menaquinone biosynthesis methyltransferase 343 65.43 +1 367500..368390 + 296 86356012 fpg RHE_CH00355 - formamidopyrimidine-DNA glycosylase 344 63.57 0 368411..369184 + 257 86356013 fadB1 RHE_CH00356 - enoyl-CoA hydratase 345 63.80 0 369376..369654 + 92 86356014 rpsT RHE_CH00357 - 30S ribosomal protein S20 346 62.93 0 370494..372044 + 516 86356015 dnaA RHE_CH00358 - chromosomal replication initiation protein 347 63.07 0 372206..373288 + 360 86356016 - RHE_CH00359 - putative dehydrogenase protein 348 63.84 0 373352..374554 - 400 86356017 hemNch RHE_CH00360 - coproporphyrinogen III oxidase 349 64.50 0 374562..375206 - 214 86356018 - RHE_CH00361 - putative deoxyribonucleotide triphosphate pyrophosphatase 350 61.39 0 375207..375623 - 138 86356019 - RHE_CH00362 - lactoylglutathione lyase protein 351 63.33 0 375629..376348 - 239 86356020 rph RHE_CH00363 - ribonuclease PH 352 63.23 0 376458..377564 + 368 86356021 hrcA RHE_CH00364 - heat-inducible transcription repressor 353 63.84 0 377676..378311 + 211 86356022 grpE RHE_CH00365 - molecular chaperone heat shock protein (hsp-70) 354 62.33 0 378352..379296 - 314 86356023 iunH1 RHE_CH00366 - inosine-uridine preferring nucleoside hydrolase protein 355 62.44 0 379578..380003 + 141 86356024 hsp RHE_CH00367 - molecular chaperone small heat shock protein 356 56.98 -1 380050..380307 + 85 86356025 - RHE_CH00368 - hypothetical protein 357 63.35 0 380592..381284 - 230 86356026 trmB RHE_CH00369 - tRNA (guanine-N(7))-methyltransferase 358 63.64 0 381290..382543 - 417 86356027 metK RHE_CH00370 - S-adenosylmethionine synthetase 359 59.05 0 382724..383143 - 139 86356028 - RHE_CH00371 - transcriptional regulator protein 360 62.65 0 383304..384896 - 530 86356029 lnt RHE_CH00372 - apolipoprotein N-acyltransferase 361 64.75 0 385008..386153 - 381 86356030 - RHE_CH00373 - putative hemolysin protein 362 58.91 0 386150..386665 - 171 86356031 - RHE_CH00374 - hypothetical protein 363 63.72 0 386665..387717 - 350 86356032 phoH RHE_CH00375 - phosphate starvation inducible protein 364 62.70 0 387736..389145 - 469 86356033 - RHE_CH00376 - putative 2-methylthioadenine synthetase (miaB-like) protein 365 66.67 +1 389195..389929 - 244 86356034 olsA RHE_CH00377 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (phospholipid/glycerol acyltransferase) protein 366 60.37 0 390020..390448 - 142 86356035 fur RHE_CH00378 - ferric uptake regulation protein 367 64.65 0 390528..391022 - 164 86356036 rimI RHE_CH00379 - ribosomal-protein-alanine N-acetyltransferase protein 368 64.86 +1 391025..391687 - 220 86356037 - RHE_CH00380 - O-sialoglycoprotein endopeptidase protein 369 59.26 0 391775..392341 - 188 86356038 nifUch1 RHE_CH00381 - nitrogen fixation protein 370 64.84 +1 392451..392942 - 163 86356039 - RHE_CH00382 - putative universal stress protein 371 62.16 0 393052..394116 - 354 86356040 trpS RHE_CH00383 - tryptophanyl-tRNA synthetase 372 63.16 0 394214..394612 - 132 86356041 - RHE_CH00384 - putative glyoxalase protein 373 62.70 0 394798..395226 + 142 86356042 - RHE_CH00385 - hypothetical protein 374 63.88 0 395395..396975 - 526 86356043 mviN RHE_CH00386 - virulence factor transmembrane protein 375 62.86 0 396986..399820 - 944 86356044 glnD RHE_CH00387 - PII uridylyl-transferase 376 65.71 +1 400314..403040 - 908 86356045 mutS RHE_CH00388 - DNA mismatch repair protein 377 64.35 0 403154..405436 + 760 86356046 tme RHE_CH00389 - malic enzyme 378 62.53 0 405692..406561 - 289 86356047 - RHE_CH00390 - hypothetical protein 379 66.18 +1 406672..408954 - 760 86356048 - RHE_CH00391 - two-component sensor histidine kinase/response regulator hybrid protein 380 60.32 0 409010..409513 - 167 86356049 lpsA RHE_CH00392 - lipoprotein signal peptidase protein 381 65.27 +1 409510..410370 - 286 86356050 spoU RHE_CH00393 - rRNA methylase 382 65.75 +1 410367..411461 - 364 86356051 - RHE_CH00394 - SAM-dependent methyltransferase protein 383 63.69 0 411588..412226 - 212 86356052 - RHE_CH00395 - MutT/NUDIX family hydrolase 384 61.18 0 412294..412749 + 151 86356053 - RHE_CH00396 - hypothetical protein 385 60.38 0 412718..413242 + 174 86356054 - RHE_CH00397 - putative acetyltransferase protein 386 63.36 0 413262..413594 - 110 86356055 - RHE_CH00398 - hypothetical protein 387 60.67 0 413725..414024 - 99 86356056 ihfB RHE_CH00399 - integration host factor subunit beta 388 60.78 0 414054..415004 - 316 86356057 sppA RHE_CH00400 - proteinase IV protein 389 58.26 -1 415223..415888 + 221 86356058 - RHE_CH00401 - hypothetical protein 390 60.19 0 416012..416536 + 174 86356059 - RHE_CH00402 - hypothetical protein 391 62.93 0 416574..417350 + 258 86356060 - RHE_CH00403 - amino acid ABC transporter ATP-binding protein 392 62.95 0 417495..419054 + 519 86356061 rpoNch RHE_CH00404 - RNA polymerase factor sigma-54 393 63.27 0 419137..420048 + 303 86356062 - RHE_CH00405 - putative permease protein 394 54.77 -2 420275..420913 + 212 86356063 - RHE_CH00406 - sigma 54 modulation protein 395 61.08 0 420987..421451 + 154 86356064 ptsNch RHE_CH00407 - protein-N(pi)-phosphohistidine-sugar phosphotransferase protein (enzyme II of thephosphotransferase system) 396 63.31 0 421524..423878 - 784 86356065 mcpX1 RHE_CH00408 - methyl-accepting chemotaxis protein 397 64.75 0 424118..425056 - 312 86356066 rbsK RHE_CH00409 - ribose kinase protein 398 63.48 0 425097..426131 - 344 86356067 - RHE_CH00410 - hypothetical protein 399 61.70 0 426441..428012 + 523 86356068 mcpV1 RHE_CH00411 - methyl-accepting chemotaxis protein 400 61.05 0 428111..428626 + 171 86356069 def RHE_CH00412 - peptide deformylase 401 57.86 -1 428949..429368 + 139 86356070 stdB RHE_CH00413 - plasmid stability protein 402 65.92 +1 429389..430324 + 311 86356071 fmt RHE_CH00414 - methionyl-tRNA formyltransferase 403 66.79 +1 430324..431127 + 267 86356072 truA RHE_CH00415 - tRNA pseudouridine synthase A 404 63.99 0 431155..431751 - 198 86356073 - RHE_CH00416 - hypothetical protein 405 65.69 +1 431738..432967 - 409 86356074 dapE2 RHE_CH00417 - succinyl-diaminopimelate desuccinylase 406 62.83 0 433032..433892 - 286 86356075 dapD RHE_CH00418 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 407 61.11 0 433921..434946 + 341 86356076 - RHE_CH00419 - hypothetical protein 408 63.90 0 435021..435635 - 204 86356077 - RHE_CH00420 - hypothetical protein 409 58.72 0 435743..436459 - 238 86356078 - RHE_CH00421 - putative hydrolase protein 410 62.68 0 436645..438174 + 509 86356079 bchE RHE_CH00422 - Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit protein 411 64.71 0 438230..439303 + 357 86356080 ada RHE_CH00423 - methylated-DNA-[protein]-cysteine S-methyltransferase protein 412 62.91 0 439300..440070 + 256 86356081 - RHE_CH00424 - putative carboxyphosphonoenolpyruvate phosphonomutase protein 413 62.84 0 440134..441282 - 382 86356082 lldD1 RHE_CH00425 - L-lactate dehydrogenase (cytochrome) protein 414 61.98 0 441665..442603 - 312 86356083 - RHE_CH00426 - fatty acid desaturase protein 415 60.51 0 442742..443131 + 129 86356084 - RHE_CH00427 - ArsR family transcriptional regulator 416 61.07 0 443228..444316 - 362 86356085 argB RHE_CH00428 - acetylglutamate kinase 417 61.94 0 444378..444800 + 140 86356086 sigK RHE_CH00429 - RNA polymerase sigma factor 418 63.75 0 444797..445516 + 239 86356087 - RHE_CH00430 - hypothetical protein 419 58.71 0 445590..446180 + 196 86356088 - RHE_CH00431 - putative transforming growth factor-induced protein (and secreted protein MPB70) 420 57.61 -1 446286..447356 - 356 86356089 - RHE_CH00432 - two-component sensor histidine kinase protein 421 54.55 -2 447592..448020 - 142 86356090 - RHE_CH00433 - hypothetical protein 422 57.33 -1 448069..448293 - 74 86356091 - RHE_CH00434 - hypothetical protein 423 55.56 -1 448424..448648 - 74 86356092 - RHE_CH00435 - cold shock protein 424 61.47 0 448878..449531 - 217 86356093 engB RHE_CH00436 - GTPase EngB 425 60.87 0 449672..451465 - 597 86356094 - RHE_CH00437 - putative inner membrane protein translocase component YidC 426 61.94 0 451465..451866 - 133 86356095 rnpA RHE_CH00438 - ribonuclease P 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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