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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3373 56.04 -1 3633618..3634445 + 275 86359042 rapB3 RHE_CH03450 - autoaggregation protein (adhering protein) 3374 64.71 0 3635085..3636311 - 408 86359043 trmU RHE_CH03452 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3375 59.55 0 3636781..3637047 + 88 86359044 - RHE_CH03453 - hypothetical protein 3376 60.96 0 3637128..3638723 - 531 86359045 serA RHE_CH03454 - D-3-phosphoglycerate dehydrogenase 3377 63.44 0 3638806..3639984 - 392 86359046 serC RHE_CH03455 - phosphoserine aminotransferase 3378 62.74 0 3640175..3641014 - 279 86359047 - RHE_CH03456 - heat resistant agglutinin 1 protein 3379 62.23 0 3641273..3642625 - 450 86359048 - RHE_CH03457 - phosphosugar isomerase protein 3380 61.39 0 3642867..3644798 - 643 86359049 ftsH RHE_CH03458 - cell division metalloproteinase protein 3381 62.42 0 3644896..3646356 - 486 86359050 - RHE_CH03459 - putative cell cycle protein MesJ/cytosine deaminase-related protein 3382 62.13 0 3646368..3647117 - 249 86359051 - RHE_CH03460 - hypothetical protein 3383 64.99 +1 3647517..3648053 - 178 86359052 omp2 RHE_CH03461 - outer membrane lipoprotein 3384 62.09 0 3648205..3649515 - 436 86359053 tolB RHE_CH03462 - translocation protein TolB 3385 52.51 -2 3649538..3649975 - 145 86359054 - RHE_CH03463 - putative signal peptide protein 3386 58.53 0 3649976..3651118 - 380 86359055 tolA RHE_CH03464 - signal peptide protein 3387 62.94 0 3651127..3651582 - 151 86359056 tolR RHE_CH03465 - protein transporter protein 3388 62.92 0 3651601..3652320 - 239 86359057 tolQ RHE_CH03466 - protein transporter protein 3389 61.84 0 3652686..3653141 - 151 86359058 - RHE_CH03467 - 4-hydroxybenzoyl-CoA thioesterase protein 3390 59.87 0 3653305..3654525 + 406 86359059 sqdB RHE_CH03468 - sulfolipid (UDP-sulfoquinovose) biosynthesis protein 3391 59.27 0 3654721..3655545 + 274 86359060 sqdD RHE_CH03469 - glycosyltransferase (sulfolipid biosynthesis) protein 3392 64.64 0 3655620..3656507 + 295 86359061 sqdC RHE_CH03470 - sulfolipid biosynthesis protein 3393 61.86 0 3656537..3657181 + 214 86359062 - RHE_CH03471 - 5-formyltetrahydrofolate cyclo-ligase protein 3394 63.55 0 3657209..3658009 + 266 86359063 - RHE_CH03472 - hypothetical protein 3395 59.50 0 3658231..3658956 + 241 86359064 - RHE_CH03473 - hypothetical protein 3396 57.14 -1 3658987..3659532 - 181 86359065 - RHE_CH03474 - hypothetical protein 3397 59.97 0 3659632..3660378 + 248 86359066 - RHE_CH03475 - hypothetical protein 3398 63.37 0 3660596..3661597 - 333 86359067 - RHE_CH03476 - oxidoreductase protein 3399 62.48 0 3661721..3664036 - 771 86359068 - RHE_CH03477 - methyl-accepting chemotaxis protein 3400 61.76 0 3664279..3664788 + 169 86359069 ruvC RHE_CH03478 - Holliday junction resolvase 3401 57.58 -1 3664843..3665106 + 87 86359070 - RHE_CH03479 - putative regulator protein of stationary/sporulation gene expression 3402 60.43 0 3665087..3665503 + 138 86359071 - RHE_CH03480 - putative nucleic acid-binding protein 3403 65.04 +1 3665517..3666131 + 204 86359072 ruvA RHE_CH03481 - Holliday junction DNA helicase motor protein 3404 64.36 0 3666214..3667254 + 346 86359073 ruvB RHE_CH03482 - Holliday junction DNA helicase B 3405 62.54 0 3667309..3668157 + 282 86359074 - RHE_CH03483 - phosphohydrolase protein 3406 60.11 0 3668523..3669086 + 187 86359075 - RHE_CH03484 - hypothetical protein 3407 61.46 0 3669164..3670546 - 460 86359076 atvA RHE_CH03485 - acid tolerance and virulence protein 3408 61.79 0 3670543..3673146 - 867 86359077 - RHE_CH03486 - hypothetical protein 3409 61.82 0 3673370..3675517 - 715 86359078 - RHE_CH03487 - small-conductance mechanosensitive channel transmembrane protein 3410 63.47 0 3675696..3676727 - 343 86359079 - RHE_CH03488 - 6-phosphogluconate dehydrogenase-like protein 3411 61.28 0 3676843..3677325 - 160 86359080 - RHE_CH03489 - hypothetical protein 3412 61.01 0 3677381..3677716 + 111 86359081 - RHE_CH03490 - ArsR family transcriptional regulator 3413 65.36 +1 3677794..3678330 + 178 86359082 - RHE_CH03491 - hypothetical protein 3414 63.01 0 3678429..3679412 + 327 86359083 - RHE_CH03492 - putative UDP-glucose 4-epimerase protein 3415 64.29 0 3679795..3680172 - 125 86359084 - RHE_CH03493 - hypothetical protein 3416 61.96 0 3680189..3680464 - 91 86359085 - RHE_CH03494 - hypothetical protein 3417 63.02 0 3680825..3682771 + 648 86359086 tkt RHE_CH03495 - transketolase 3418 63.20 0 3682853..3683863 + 336 86359087 gap RHE_CH03496 - glyceraldehyde 3-phosphate dehydrogenase protein 3419 58.41 -1 3684003..3684317 + 104 86359088 - RHE_CH03497 - hypothetical protein 3420 62.83 0 3685042..3686916 + 624 86359089 - RHE_CH03498 - potassium/proton antiporter 3421 63.64 0 3686933..3688189 + 418 86359090 pgk RHE_CH03499 - phosphoglycerate kinase 3422 62.07 0 3688477..3689499 + 340 86359091 fbaB RHE_CH03500 - fructose-bisphosphate aldolase protein 3423 63.53 0 3689852..3690775 + 307 86359092 phzF RHE_CH03501 - phenazine biosynthesis protein 3424 60.00 0 3690805..3690969 - 54 86359093 - RHE_CH03502 - hypothetical protein 3425 63.93 0 3691142..3692422 + 426 86359094 - RHE_CH03503 - transporter permease protein 3426 58.85 0 3692578..3692769 + 63 86359095 - RHE_CH03504 - hypothetical protein 3427 62.40 0 3693161..3693676 + 171 86359096 - RHE_CH03505 - hypothetical protein 3428 59.01 0 3693815..3694036 - 73 86359097 rpmE RHE_CH03506 - 50S ribosomal protein L31 3429 66.78 +1 3694304..3696031 + 575 86359098 - RHE_CH03507 - multidrug ABC transporter ATP-binding protein 3430 64.25 0 3696175..3697167 + 330 86359099 - RHE_CH03508 - hypothetical protein 3431 53.44 -2 3697329..3697517 + 62 86359100 - RHE_CH03509 - hypothetical protein 3432 63.13 0 3697787..3698125 + 112 86359101 - RHE_CH03510 - hypothetical protein 3433 66.99 +1 3698133..3699383 + 416 86359102 - RHE_CH03511 - RNA polymerase ECF-subfamily sigma factor 3434 64.24 0 3699384..3700415 - 343 86359103 - RHE_CH03512 - hypothetical protein 3435 63.41 0 3700419..3701522 - 367 86359104 - RHE_CH03513 - hypothetical protein 3436 63.30 0 3701635..3702435 - 266 86359105 suhBch RHE_CH03514 - myo-inositol-1(or 4)-monophosphatase protein 3437 64.85 +1 3702634..3703731 - 365 86359106 cheBch2 RHE_CH03515 - chemotaxis-specific methylesterase protein 3438 58.62 0 3703740..3704597 - 285 86359107 cheRch2 RHE_CH03516 - chemotaxis methyltransferase protein 3439 62.26 0 3704625..3705101 - 158 86359108 cheW3 RHE_CH03517 - chemotaxis signal transduction protein 3440 62.03 0 3705104..3707131 - 675 86359109 - RHE_CH03518 - putative methyl-accepting chemotaxis protein 3441 62.51 0 3707152..3708954 - 600 86359110 - RHE_CH03519 - putative methyl-accepting chemotaxis protein 3442 62.56 0 3709338..3711041 - 567 86359111 - RHE_CH03520 - putative methyl-accepting chemotaxis protein 3443 60.39 0 3711073..3711582 - 169 86359112 cheW4 RHE_CH03521 - chemotaxis signal transduction protein 3444 63.55 0 3711579..3713630 - 683 86359113 - RHE_CH03522 - putative chemotaxis two-component sensor histidine kinase protein 3445 58.54 0 3713627..3713995 - 122 86359114 cheY3 RHE_CH03523 - chemotaxis two-component response regulator protein 3446 43.94 -2 3713992..3714321 - 109 86359115 - RHE_CH03524 - hypothetical protein 3447 61.51 0 3714791..3716401 + 536 86359116 - RHE_CH03525 - putative chemotaxis sensory transducer protein 3448 62.87 0 3716524..3717657 - 377 86359117 - RHE_CH03526 - hypothetical protein 3449 61.96 0 3717617..3718360 - 247 86359118 thiEch RHE_CH03527 - thiamine-phosphate pyrophosphorylase 3450 63.53 0 3718379..3719143 + 254 86359119 - RHE_CH03528 - putative transporter, permease protein 3451 59.39 0 3719211..3719471 + 86 86359120 - RHE_CH03529 - transcriptional regulator protein 3452 56.37 -1 3720064..3720267 + 67 86359121 - RHE_CH03530 - hypothetical protein 3453 63.93 0 3720341..3720778 + 145 86359122 purE RHE_CH03531 - phosphoribosylaminoimidazole carboxylase catalytic subunit protein 3454 64.53 0 3720724..3721845 + 373 86359123 purK RHE_CH03532 - phosphoribosylaminoimidazole carboxylase ATPase subunit 3455 56.35 -1 3722018..3722143 + 41 86359124 rpmJ RHE_CH03533 - 50S ribosomal protein L36 3456 57.89 -1 3722253..3722867 + 204 86359125 - RHE_CH03534 - hypothetical protein 3457 63.75 0 3723078..3724004 + 308 86359126 - RHE_CH03535 - lactone-specific esterase protein 3458 62.75 0 3724129..3725865 + 578 86359127 ggt2 RHE_CH03536 - gamma-glutamyltranspeptidase protein 3459 66.97 +1 3725988..3726962 + 324 86359128 - RHE_CH03537 - threonine dehydratase protein 3460 65.20 +1 3727018..3727971 - 317 86359129 - RHE_CH03538 - LysR family transcriptional regulator 3461 61.19 0 3728032..3728451 + 139 86359130 - RHE_CH03539 - hypothetical protein 3462 61.98 0 3728448..3729002 + 184 86359131 - RHE_CH03540 - hypothetical protein 3463 60.66 0 3729005..3729637 - 210 86359132 - RHE_CH03541 - amino acid efflux LysE family protein 3464 64.73 0 3729765..3731207 - 480 86359133 pykA RHE_CH03542 - pyruvate kinase 3465 60.08 0 3731204..3731689 - 161 86359134 - RHE_CH03543 - hypothetical protein 3466 62.23 0 3731888..3732676 + 262 86359135 - RHE_CH03544 - putative N-formylglutamate amidohydrolase protein 3467 59.80 0 3732703..3733008 + 101 86359136 - RHE_CH03545 - hypothetical protein 3468 56.82 -1 3733100..3733363 + 87 86359137 - RHE_CH03546 - hypothetical protein 3469 64.06 0 3733518..3735359 - 613 86359138 - RHE_CH03547 - hypothetical protein 3470 61.74 0 3735539..3737080 - 513 86359139 tacA RHE_CH03548 - sigma-54-dependent transcriptional regulator (activator) protein 3471 59.43 0 3737045..3739144 + 699 86359140 pepF RHE_CH03549 - oligoendopeptidase F protein 3472 60.71 0 3739361..3740518 + 385 86359141 pabB RHE_CH03550 - para-aminobenzoate synthase component I 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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