version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3245 63.14 0 3476143..3477306 - 387 86358914 - RHE_CH03315 - urea or short-chain amide ABC transporter, permease protein 3246 62.03 0 3477303..3478919 - 538 86358915 - RHE_CH03316 - urea or short-chain amide ABC transporter, permease protein 3247 59.47 0 3479029..3480321 - 430 86358916 - RHE_CH03317 - urea or short-chain amide ABC transporter, substrate-binding protein 3248 62.49 0 3480503..3482587 - 694 86358917 - RHE_CH03318 - putative phosphatase protein 3249 63.94 0 3485963..3486880 + 305 86358918 - RHE_CH03320 - two-component response regulator protein 3250 60.96 0 3487057..3488178 - 373 86358919 braC2 RHE_CH03321 - amino acid ABC transporter, substrate-binding protein 3251 55.08 -2 3488299..3488652 - 117 86358920 - RHE_CH03322 - hypothetical protein 3252 61.42 0 3488672..3489415 - 247 86358921 braG RHE_CH03323 - amino acid ABC transporter, ATP-binding protein 3253 58.45 0 3489415..3490290 - 291 86358922 braF RHE_CH03324 - amino acid ABC transporter, ATP-binding protein 3254 58.84 0 3490290..3491681 - 463 86358923 braE RHE_CH03325 - amino acid ABC transporter, permease protein 3255 58.14 -1 3491686..3492588 - 300 86358924 braD RHE_CH03326 - amino acid ABC transporter, permease protein 3256 63.03 0 3493124..3493921 + 265 86358925 pssB RHE_CH03327 - exopolysaccharide production protein 3257 60.86 0 3494599..3495201 + 200 86358926 pssA2 RHE_CH03328 - exopolysaccharide production protein 3258 58.22 -1 3495301..3495750 - 149 86358927 - RHE_CH03329 - hypothetical protein 3259 61.16 0 3495806..3496132 + 108 86358928 - RHE_CH03330 - hypothetical protein 3260 61.11 0 3496152..3496655 - 167 86358929 - RHE_CH03331 - hypothetical protein 3261 61.15 0 3496654..3497034 + 126 86358930 - RHE_CH03332 - putative acetyltransferase protein 3262 54.80 -2 3497191..3497544 - 117 86358931 - RHE_CH03333 - hypothetical protein 3263 57.26 -1 3497982..3498683 + 233 86358932 ctrA RHE_CH03334 - two-component response regulator protein controls chromosomal replication initiation 3264 57.30 -1 3498861..3499223 - 120 86358933 - RHE_CH03335 - two-component response regulator protein 3265 61.73 0 3499342..3499989 - 215 86358934 - RHE_CH03336 - hypothetical protein 3266 60.88 0 3500184..3500771 + 195 86358935 - RHE_CH03337 - hypothetical protein 3267 63.46 0 3501050..3502048 + 332 86358936 - RHE_CH03338 - hypothetical protein 3268 64.36 0 3502052..3502873 - 273 86358937 - RHE_CH03339 - RNA methylase protein 3269 61.98 0 3502880..3503263 - 127 86358938 - RHE_CH03340 - hypothetical protein 3270 62.54 0 3503266..3504330 + 354 86358939 rluD RHE_CH03341 - pseudouridylate synthase, ribosomal large subunit D protein 3271 61.39 0 3504521..3505429 + 302 86358940 rpoH1 RHE_CH03342 - RNA polymerase factor sigma-32 3272 64.13 0 3505653..3508139 - 828 86358941 - RHE_CH03343 - hypothetical protein 3273 62.36 0 3508200..3509498 - 432 86358942 purA RHE_CH03344 - adenylosuccinate synthetase 3274 59.47 0 3509446..3510765 + 439 86358943 - RHE_CH03345 - hypothetical protein 3275 63.25 0 3510611..3511459 - 282 86358944 - RHE_CH03346 - putative acetyltransferase protein 3276 63.92 0 3511787..3513571 - 594 86358945 - RHE_CH03347 - dihydroxy-acid dehydratase 3277 62.57 0 3513862..3517062 - 1066 86358946 mexF1 RHE_CH03348 - multidrug-efflux system, acriflavin resistance protein 3278 64.74 0 3517180..3518370 - 396 86358947 mexE1 RHE_CH03349 - HlyD family multidrug-efflux system secretion protein 3279 61.64 0 3518417..3519211 - 264 86358948 - RHE_CH03350 - putative esterase protein 3280 59.00 0 3519253..3520308 + 351 86358949 - RHE_CH03351 - LysR family transcriptional regulator 3281 64.38 0 3520554..3521297 - 247 86358950 - RHE_CH03352 - short chain dehydrogenase 3282 63.81 0 3521414..3522322 + 302 86358951 - RHE_CH03353 - LysR family transcriptional regulator 3283 60.32 0 3522346..3522660 + 104 86358952 - RHE_CH03354 - hypothetical protein 3284 63.59 0 3522708..3523325 + 205 86358953 - RHE_CH03355 - 3-methyladenine DNA glycosylase 3285 62.71 0 3523326..3524867 - 513 86358954 - RHE_CH03356 - multidrug resistance protein 3286 62.64 0 3524860..3526077 - 405 86358955 - RHE_CH03357 - HlyD family protein secretion protein 3287 60.43 0 3526070..3526534 - 154 86358956 - RHE_CH03358 - MarR family transcriptional regulator 3288 62.78 0 3526765..3528306 + 513 86358957 - RHE_CH03359 - Na+/H+ antiporter protein 3289 63.02 0 3528566..3529744 + 392 86358958 mexE2 RHE_CH03360 - HlyD family multidrug-efflux system secretion protein 3290 61.14 0 3529741..3532926 + 1061 86358959 mexF2 RHE_CH03361 - multidrug-efflux system, acriflavin resistance protein 3291 61.65 0 3533063..3533800 - 245 86358960 - RHE_CH03362 - serine/threonine specific protein phosphatase protein 3292 64.32 0 3534005..3535153 + 382 86358961 - RHE_CH03363 - putative FMNH2-dependent monooxygenase protein 3293 60.65 0 3535166..3535630 - 154 86358962 - RHE_CH03364 - hypothetical protein 3294 61.85 0 3535807..3536595 - 262 86358963 - RHE_CH03365 - short-chain alcohol dehydrogenase protein 3295 64.20 0 3536736..3537506 + 256 86358964 - RHE_CH03366 - putative hydroxypyruvate isomerase protein 3296 61.22 0 3537503..3537943 - 146 86358965 - RHE_CH03367 - hypothetical protein 3297 62.24 0 3538131..3538604 + 157 86358966 - RHE_CH03368 - hypothetical protein 3298 65.95 +1 3538621..3539730 - 369 86358967 ugpCch2 RHE_CH03369 - glycerol-3-phosphate transporter ATP-binding subunit 3299 60.11 0 3539743..3540657 - 304 86358968 ugpEch2 RHE_CH03370 - sn-glycerol-3-phosphate ABC transporter, permease protein 3300 58.08 -1 3540668..3541552 - 294 86358969 ugpAch2 RHE_CH03371 - sn-glycerol-3-phosphate ABC transporter, permease protein 3301 60.47 0 3541677..3543032 - 451 86358970 ugpBch2 RHE_CH03372 - sn-glycerol 3-phosphate ABC transporter, substrate-binding protein 3302 65.75 +1 3543397..3544602 - 401 86358971 - RHE_CH03373 - ROK family transcriptional regulator 3303 60.61 0 3544832..3546070 + 412 86358972 - RHE_CH03374 - sugar ABC transporter, substrate-binding protein 3304 66.21 +1 3546151..3547035 + 294 86358973 - RHE_CH03375 - sugar ABC transporter, permease protein 3305 64.66 0 3547035..3547880 + 281 86358974 - RHE_CH03376 - sugar ABC transporter, permease protein 3306 66.96 +1 3547877..3548899 + 340 86358975 - RHE_CH03377 - sugar-processing enzyme 3307 65.16 +1 3548900..3549829 + 309 86358976 - RHE_CH03378 - sugar kinase protein 3308 63.33 0 3549826..3550905 + 359 86358977 - RHE_CH03379 - sugar ABC transporter, ATP-binding protein 3309 58.16 -1 3550927..3551655 - 242 86358978 exsH RHE_CH03380 - endo-1,3-1,4-beta-glycanase protein 3310 61.27 0 3551806..3553287 - 493 86358979 - RHE_CH03381 - exopolysaccharide polymerization/export protein 3311 60.40 0 3553367..3554707 - 446 86358980 - RHE_CH03382 - glycosyltransferase 3312 62.06 0 3554608..3555954 - 448 86358981 - RHE_CH03383 - glycosyltransferase 3313 57.32 -1 3555954..3556691 - 245 86358982 - RHE_CH03384 - putative transcriptional regulator protein 3314 59.54 0 3557139..3557840 + 233 86358983 exoY RHE_CH03385 - exopolysaccharide production protein 3315 60.91 0 3558050..3559717 + 555 86358984 - RHE_CH03386 - exopolysaccharide transporter 3316 63.83 0 3559714..3560736 + 340 86358985 - RHE_CH03387 - glycosyltransferase 3317 59.93 0 3560741..3562120 + 459 86358986 exoF2 RHE_CH03388 - exopolysaccharide biosynthesis protein 3318 59.24 0 3562243..3563709 + 488 86358987 - RHE_CH03389 - hypothetical protein 3319 60.48 0 3563709..3564452 + 247 86358988 - RHE_CH03390 - hypothetical protein 3320 55.37 -1 3564449..3565360 + 303 86358989 - RHE_CH03391 - glycosyltransferase 3321 55.76 -1 3565420..3566538 + 372 86358990 - RHE_CH03392 - hypothetical protein 3322 54.68 -2 3566782..3567891 - 369 86358991 - RHE_CH03393 - acetyltransferase protein 3323 60.32 0 3568090..3570420 + 776 86358992 - RHE_CH03394 - putative pyrroloquinoline-quinone-dependent quinate dehydrogenase protein 3324 62.69 0 3570443..3570769 + 108 86358993 - RHE_CH03395 - multicopper oxidase protein 3325 52.80 -2 3570933..3571307 + 124 86358994 - RHE_CH03396 - hypothetical protein 3326 60.49 0 3571321..3571644 + 107 86358995 - RHE_CH03397 - hypothetical protein 3327 64.90 +1 3578532..3578870 + 112 86358996 - RHE_CH03404 - hypothetical protein 3328 59.42 0 3579009..3579215 + 68 86358997 - RHE_CH03405 - hypothetical protein 3329 62.51 0 3579236..3580174 + 312 86358998 - RHE_CH03406 - pseudouridylate synthase, ribosomal large subunit protein 3330 65.23 +1 3580189..3580884 + 231 86358999 - RHE_CH03407 - phosphoribosyltransferase 3331 62.59 0 3581024..3582766 + 580 86359000 - RHE_CH03408 - cation transporter protein 3332 59.15 0 3582852..3583796 + 314 86359001 purC2 RHE_CH03409 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3333 60.86 0 3583906..3584508 + 200 86359002 - RHE_CH03410 - TetR family transcriptional regulator 3334 63.20 0 3584663..3585874 + 403 86359003 - RHE_CH03411 - HlyD family protein secretion protein 3335 60.88 0 3585922..3589032 + 1036 86359004 - RHE_CH03412 - multidrug ABC transporter 3336 63.33 0 3589184..3590620 + 478 86359005 nodTch RHE_CH03413 - nodulation protein (outer membrane efflux protein) 3337 63.03 0 3590784..3591827 + 347 86359006 - RHE_CH03414 - LacI family transcription regulator 3338 60.12 0 3591829..3592851 + 340 86359007 potD RHE_CH03415 - spermidine/putrescine ABC transporter, substrate-binding protein 3339 62.44 0 3592914..3593741 + 275 86359008 potB RHE_CH03416 - spermidine/putrescine ABC transporter, permease component I protein 3340 62.05 0 3593738..3594517 + 259 86359009 potC RHE_CH03417 - spermidine/putrescine ABC transporter, permease component II protein 3341 65.01 +1 3594510..3595535 + 341 86359010 potA RHE_CH03418 - spermidine/putrescine ABC transporter, ATP-binding protein 3342 66.45 +1 3595540..3596460 + 306 86359011 - RHE_CH03419 - inosine-uridine preferring nucleoside hydrolase protein 3343 66.11 +1 3596457..3598244 + 595 86359012 adeC2 RHE_CH03420 - adenine deaminase protein 3344 60.09 0 3598605..3599774 + 389 86359013 - RHE_CH03421 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0