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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3185 62.55 0 3423421..3424464 - 347 86358854 thuBch RHE_CH03255 - myo-inositol 2-dehydrogenase protein 3186 62.72 0 3424474..3425259 - 261 86358855 thuAch RHE_CH03256 - trehalosemaltose utilization protein 3187 58.77 0 3425453..3425794 - 113 86358856 - RHE_CH03257 - methyl viologen/ethidium resistance transmembrane protein 3188 60.32 0 3425813..3426442 - 209 86358857 - RHE_CH03258 - TetR family transcriptional regulator 3189 63.24 0 3426545..3426952 + 135 86358858 - RHE_CH03259 - putative globin-like protein 3190 67.47 +1 3426949..3427320 + 123 86358859 - RHE_CH03260 - hypothetical protein 3191 58.60 0 3427317..3427688 - 123 86358860 - RHE_CH03261 - putative bleomycin resistance protein 3192 59.68 0 3427685..3427999 - 104 86358861 - RHE_CH03262 - hypothetical protein 3193 63.74 0 3428009..3428281 - 90 86358862 - RHE_CH03263 - hypothetical protein 3194 62.25 0 3428278..3428685 - 135 86358863 - RHE_CH03264 - hypothetical protein 3195 62.44 0 3428794..3430119 - 441 86358864 - RHE_CH03265 - putative membrane protein, transduces energy to outer membrane receptors 3196 62.44 0 3430178..3430603 - 141 86358865 - RHE_CH03266 - hypothetical protein 3197 56.28 -1 3430781..3430963 + 60 86358866 hmuP RHE_CH03267 - hemin transport system, hemin uptake protein 3198 60.57 0 3430983..3432032 + 349 86358867 hmuS RHE_CH03268 - hemin transport system, degrading protein 3199 65.48 +1 3432044..3432973 + 309 86358868 hmuT RHE_CH03269 - hemin transport system, hemin-binding protein 3200 68.19 +2 3432976..3434088 + 370 86358869 hmuU RHE_CH03270 - hemin transport system, permease protein 3201 64.28 0 3434110..3434904 + 264 86358870 hmuV RHE_CH03271 - hemin importer ATP-binding subunit 3202 63.77 0 3435052..3435396 + 114 86358871 - RHE_CH03272 - hypothetical protein 3203 60.22 0 3436014..3436571 - 185 86358872 rpoE4 RHE_CH03273 - RNA polymerase sigma factor 3204 56.04 -1 3436581..3436787 - 68 86358873 - RHE_CH03274 - hypothetical protein 3205 56.23 -1 3437035..3437829 + 264 86358874 tcrX RHE_CH03275 - two-component response regulator 3206 58.49 0 3438060..3439013 + 317 86358875 tcrY RHE_CH03276 - two-component sensor histidine kinase protein 3207 63.58 0 3439426..3440787 + 453 86358876 - RHE_CH03277 - putative oxidoreductase 3208 63.09 0 3440803..3442116 + 437 86358877 - RHE_CH03278 - dihydropyrimidine dehydrogenase 3209 56.56 -1 3442276..3444264 + 662 86358878 - RHE_CH03279 - putative 1,4-alpha-glucan branching enzyme protein 3210 53.56 -2 3444334..3444768 - 144 86358879 - RHE_CH03280 - hypothetical protein 3211 57.28 -1 3444833..3445237 - 134 86358880 - RHE_CH03281 - putative dehydrogenase protein 3212 58.39 -1 3445415..3447094 + 559 86358881 malL RHE_CH03282 - oligosaccharide alpha-1,6-glucosidase protein 3213 63.90 0 3447193..3448203 - 336 86358882 ftrA RHE_CH03283 - transcriptional activator FtrA 3214 64.23 0 3448266..3448676 + 136 86358883 - RHE_CH03284 - putative rhodanese-related sulfurtransferase protein 3215 63.54 0 3448716..3449738 - 340 86358884 - RHE_CH03285 - alcohol dehydrogenase protein 3216 60.23 0 3449715..3450740 + 341 86358885 - RHE_CH03286 - LysR family transcriptional regulator 3217 59.26 0 3450839..3451270 + 143 86358886 - RHE_CH03287 - hypothetical protein 3218 62.50 0 3451273..3451680 + 135 86358887 - RHE_CH03288 - two-component response regulator protein 3219 60.06 0 3451545..3452195 - 216 86358888 - RHE_CH03289 - TetR family transcriptional regulator 3220 62.84 0 3452495..3453748 + 417 162329628 amaB RHE_CH03290 - allantoate amidohydrolase 3221 58.54 0 3453748..3454338 + 196 86358890 - RHE_CH03291 - hypothetical protein 3222 62.27 0 3454335..3455789 + 484 86358891 dht RHE_CH03292 - dihydropyrimidinase 3223 64.01 0 3455848..3456261 - 137 86358892 - RHE_CH03293 - hypothetical protein 3224 63.23 0 3456356..3457141 + 261 86358893 - RHE_CH03294 - nitrate/sulfonate ABC transporter, ATP-binding protein 3225 61.29 0 3457376..3458305 + 309 86358894 - RHE_CH03295 - nitrate/sulfonate ABC transporter, permease protein 3226 64.01 0 3458302..3459429 + 375 86358895 - RHE_CH03296 - nitrate/sulfonate ABC transporter, permease protein 3227 60.15 0 3459525..3460460 + 311 86358896 - RHE_CH03297 - nitrate/sulfonate ABC transporter, substrate-binding protein 3228 63.06 0 3460849..3462039 + 396 86358897 - RHE_CH03298 - HlyD family protein secretion protein 3229 61.40 0 3462053..3465373 + 1106 86358898 - RHE_CH03299 - acriflavin resistance efflux transporter 3230 63.24 0 3465472..3466083 - 203 86358899 ureG RHE_CH03300 - urease accessory protein 3231 65.18 +1 3466172..3466843 - 223 86358900 ureF RHE_CH03301 - urease accessory protein 3232 57.35 -1 3466849..3467535 - 228 86358901 ureE RHE_CH03302 - urease accessory protein 3233 61.03 0 3467519..3468370 - 283 86358902 - RHE_CH03303 - urease-associated protein 3234 60.71 0 3468714..3469385 - 223 86358903 - RHE_CH03304 - urease-associated protein 3235 63.40 0 3469418..3471130 - 570 86358904 ureC RHE_CH03305 - urease subunit alpha 3236 63.38 0 3471134..3471772 - 212 86358905 - RHE_CH03306 - urease-associated protein 3237 60.25 0 3471774..3472178 - 134 86358906 - RHE_CH03307 - urease-associated protein 3238 65.36 +1 3472196..3472501 - 101 86358907 ureB RHE_CH03308 - urease subunit beta 3239 62.70 0 3472512..3472763 - 83 86358908 - RHE_CH03309 - urease-associated protein 3240 62.38 0 3472773..3473075 - 100 86358909 ureA RHE_CH03310 - urease subunit gamma 3241 65.48 +1 3473104..3473775 - 223 86358910 ureD RHE_CH03311 - urease accessory protein 3242 62.79 0 3474073..3474768 - 231 86358911 - RHE_CH03312 - urea or short-chain amide ABC transporter, ATP-binding protein 3243 60.31 0 3474788..3475306 - 172 86358912 - RHE_CH03313 - hypothetical protein 3244 59.66 0 3475382..3476137 - 251 86358913 - RHE_CH03314 - urea or short-chain amide ABC transporter, ATP-binding protein 3245 63.14 0 3476143..3477306 - 387 86358914 - RHE_CH03315 - urea or short-chain amide ABC transporter, permease protein 3246 62.03 0 3477303..3478919 - 538 86358915 - RHE_CH03316 - urea or short-chain amide ABC transporter, permease protein 3247 59.47 0 3479029..3480321 - 430 86358916 - RHE_CH03317 - urea or short-chain amide ABC transporter, substrate-binding protein 3248 62.49 0 3480503..3482587 - 694 86358917 - RHE_CH03318 - putative phosphatase protein 3249 63.94 0 3485963..3486880 + 305 86358918 - RHE_CH03320 - two-component response regulator protein 3250 60.96 0 3487057..3488178 - 373 86358919 braC2 RHE_CH03321 - amino acid ABC transporter, substrate-binding protein 3251 55.08 -2 3488299..3488652 - 117 86358920 - RHE_CH03322 - hypothetical protein 3252 61.42 0 3488672..3489415 - 247 86358921 braG RHE_CH03323 - amino acid ABC transporter, ATP-binding protein 3253 58.45 0 3489415..3490290 - 291 86358922 braF RHE_CH03324 - amino acid ABC transporter, ATP-binding protein 3254 58.84 0 3490290..3491681 - 463 86358923 braE RHE_CH03325 - amino acid ABC transporter, permease protein 3255 58.14 -1 3491686..3492588 - 300 86358924 braD RHE_CH03326 - amino acid ABC transporter, permease protein 3256 63.03 0 3493124..3493921 + 265 86358925 pssB RHE_CH03327 - exopolysaccharide production protein 3257 60.86 0 3494599..3495201 + 200 86358926 pssA2 RHE_CH03328 - exopolysaccharide production protein 3258 58.22 -1 3495301..3495750 - 149 86358927 - RHE_CH03329 - hypothetical protein 3259 61.16 0 3495806..3496132 + 108 86358928 - RHE_CH03330 - hypothetical protein 3260 61.11 0 3496152..3496655 - 167 86358929 - RHE_CH03331 - hypothetical protein 3261 61.15 0 3496654..3497034 + 126 86358930 - RHE_CH03332 - putative acetyltransferase protein 3262 54.80 -2 3497191..3497544 - 117 86358931 - RHE_CH03333 - hypothetical protein 3263 57.26 -1 3497982..3498683 + 233 86358932 ctrA RHE_CH03334 - two-component response regulator protein controls chromosomal replication initiation 3264 57.30 -1 3498861..3499223 - 120 86358933 - RHE_CH03335 - two-component response regulator protein 3265 61.73 0 3499342..3499989 - 215 86358934 - RHE_CH03336 - hypothetical protein 3266 60.88 0 3500184..3500771 + 195 86358935 - RHE_CH03337 - hypothetical protein 3267 63.46 0 3501050..3502048 + 332 86358936 - RHE_CH03338 - hypothetical protein 3268 64.36 0 3502052..3502873 - 273 86358937 - RHE_CH03339 - RNA methylase protein 3269 61.98 0 3502880..3503263 - 127 86358938 - RHE_CH03340 - hypothetical protein 3270 62.54 0 3503266..3504330 + 354 86358939 rluD RHE_CH03341 - pseudouridylate synthase, ribosomal large subunit D protein 3271 61.39 0 3504521..3505429 + 302 86358940 rpoH1 RHE_CH03342 - RNA polymerase factor sigma-32 3272 64.13 0 3505653..3508139 - 828 86358941 - RHE_CH03343 - hypothetical protein 3273 62.36 0 3508200..3509498 - 432 86358942 purA RHE_CH03344 - adenylosuccinate synthetase 3274 59.47 0 3509446..3510765 + 439 86358943 - RHE_CH03345 - hypothetical protein 3275 63.25 0 3510611..3511459 - 282 86358944 - RHE_CH03346 - putative acetyltransferase protein 3276 63.92 0 3511787..3513571 - 594 86358945 - RHE_CH03347 - dihydroxy-acid dehydratase 3277 62.57 0 3513862..3517062 - 1066 86358946 mexF1 RHE_CH03348 - multidrug-efflux system, acriflavin resistance protein 3278 64.74 0 3517180..3518370 - 396 86358947 mexE1 RHE_CH03349 - HlyD family multidrug-efflux system secretion protein 3279 61.64 0 3518417..3519211 - 264 86358948 - RHE_CH03350 - putative esterase protein 3280 59.00 0 3519253..3520308 + 351 86358949 - RHE_CH03351 - LysR family transcriptional regulator 3281 64.38 0 3520554..3521297 - 247 86358950 - RHE_CH03352 - short chain dehydrogenase 3282 63.81 0 3521414..3522322 + 302 86358951 - RHE_CH03353 - LysR family transcriptional regulator 3283 60.32 0 3522346..3522660 + 104 86358952 - RHE_CH03354 - hypothetical protein 3284 63.59 0 3522708..3523325 + 205 86358953 - RHE_CH03355 - 3-methyladenine DNA glycosylase 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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