version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3151 56.36 -1 3383244..3384320 + 358 86358820 pssG RHE_CH03221 - glycosyltransferase protein 3152 59.32 0 3384317..3385201 + 294 86358821 pssF RHE_CH03222 - glycosyltransferase protein 3153 59.04 0 3385198..3386181 + 327 86358822 pssC RHE_CH03223 - glycosyltransferase protein 3154 54.88 -2 3386206..3387579 + 457 86358823 - RHE_CH03224 - hypothetical protein 3155 57.73 -1 3387691..3388149 + 152 86358824 pssD RHE_CH03225 - glucuronosyltransferase protein 3156 57.23 -1 3388146..3388622 + 158 86358825 pssE RHE_CH03226 - glucuronosyltransferase protein 3157 58.50 0 3388662..3389273 - 203 86358826 - RHE_CH03227 - putative acyl-CoA thioesterase/lipase protein 3158 58.10 -1 3389570..3390877 - 435 86358827 prsE RHE_CH03228 - HlyD family protein secretion protein 3159 59.17 0 3390893..3392692 - 599 86358828 prsD RHE_CH03229 - protease/lipase ABC transporter, ATP-binding and permease protein 3160 56.42 -1 3393139..3394758 - 539 86358829 plyA3 RHE_CH03230 - polysaccharidase protein 3161 55.51 -1 3395448..3396155 + 235 86358830 rapAch RHE_CH03231 - autoaggregation protein 3162 57.12 -1 3396482..3397183 - 233 86358831 - RHE_CH03232 - hypothetical protein 3163 57.80 -1 3397183..3399459 - 758 86358832 pssP RHE_CH03233 - exopolysaccharide polymerization protein 3164 61.34 0 3399511..3400224 - 237 86358833 pssO RHE_CH03234 - exopolysaccharide inner membrane protein 3165 58.50 0 3400310..3401521 - 403 86358834 pssN RHE_CH03235 - exopolysaccharide export protein 3166 57.16 -1 3401823..3403232 - 469 86358835 pssT2 RHE_CH03236 - endo-1,4-beta-xylanase (exopolysaccharide export) protein 3167 59.17 0 3403535..3404134 + 199 86358836 - RHE_CH03237 - hypothetical protein 3168 60.32 0 3404415..3405722 + 435 86358837 rkpK RHE_CH03238 - UDP-glucose 6-dehydrogenase protein 3169 58.88 0 3405904..3406686 - 260 86358838 - RHE_CH03239 - serine/threonine specific protein phosphatase protein 3170 61.55 0 3407793..3408398 - 201 86358839 - RHE_CH03240 - esterase/lipase/thioesterase protein 3171 62.06 0 3408409..3409341 - 310 86358840 - RHE_CH03241 - dioxygenase protein 3172 60.16 0 3409477..3410106 - 209 86358841 ung RHE_CH03242 - uracil-DNA glycosylase 3173 62.11 0 3410408..3411832 + 474 86358842 noeK RHE_CH03243 - phosphomannomutase protein 3174 60.44 0 3411835..3413295 + 486 86358843 noeJ RHE_CH03244 - mannose-1-phosphate guanylyltransferase (GDP) protein 3175 58.17 -1 3413430..3413735 + 101 86358844 - RHE_CH03245 - hypothetical protein 3176 56.95 -1 3413779..3414735 - 318 86358845 - RHE_CH03246 - putative endonuclease/exonuclease/phosphatase family protein 3177 59.19 0 3414996..3416012 + 338 86358846 lpsL RHE_CH03247 - UDP-glucuronic acid epimerase protein 3178 59.02 0 3416092..3416601 + 169 86358847 - RHE_CH03248 - hypothetical protein 3179 62.27 0 3417051..3417755 + 234 86358848 - RHE_CH03249 - TetR family transcriptional regulator 3180 67.26 +1 3417752..3418765 + 337 86358849 - RHE_CH03250 - hypothetical protein 3181 64.78 0 3418762..3420507 + 581 86358850 - RHE_CH03251 - ABC transporter ATP-binding protein 3182 63.92 0 3420504..3421631 + 375 86358851 - RHE_CH03252 - ABC transporter permease 3183 61.99 0 3421633..3422745 + 370 86358852 - RHE_CH03253 - ABC transporter permease 3184 65.15 +1 3422876..3423271 + 131 86358853 - RHE_CH03254 - hypothetical protein 3185 62.55 0 3423421..3424464 - 347 86358854 thuBch RHE_CH03255 - myo-inositol 2-dehydrogenase protein 3186 62.72 0 3424474..3425259 - 261 86358855 thuAch RHE_CH03256 - trehalosemaltose utilization protein 3187 58.77 0 3425453..3425794 - 113 86358856 - RHE_CH03257 - methyl viologen/ethidium resistance transmembrane protein 3188 60.32 0 3425813..3426442 - 209 86358857 - RHE_CH03258 - TetR family transcriptional regulator 3189 63.24 0 3426545..3426952 + 135 86358858 - RHE_CH03259 - putative globin-like protein 3190 67.47 +1 3426949..3427320 + 123 86358859 - RHE_CH03260 - hypothetical protein 3191 58.60 0 3427317..3427688 - 123 86358860 - RHE_CH03261 - putative bleomycin resistance protein 3192 59.68 0 3427685..3427999 - 104 86358861 - RHE_CH03262 - hypothetical protein 3193 63.74 0 3428009..3428281 - 90 86358862 - RHE_CH03263 - hypothetical protein 3194 62.25 0 3428278..3428685 - 135 86358863 - RHE_CH03264 - hypothetical protein 3195 62.44 0 3428794..3430119 - 441 86358864 - RHE_CH03265 - putative membrane protein, transduces energy to outer membrane receptors 3196 62.44 0 3430178..3430603 - 141 86358865 - RHE_CH03266 - hypothetical protein 3197 56.28 -1 3430781..3430963 + 60 86358866 hmuP RHE_CH03267 - hemin transport system, hemin uptake protein 3198 60.57 0 3430983..3432032 + 349 86358867 hmuS RHE_CH03268 - hemin transport system, degrading protein 3199 65.48 +1 3432044..3432973 + 309 86358868 hmuT RHE_CH03269 - hemin transport system, hemin-binding protein 3200 68.19 +2 3432976..3434088 + 370 86358869 hmuU RHE_CH03270 - hemin transport system, permease protein 3201 64.28 0 3434110..3434904 + 264 86358870 hmuV RHE_CH03271 - hemin importer ATP-binding subunit 3202 63.77 0 3435052..3435396 + 114 86358871 - RHE_CH03272 - hypothetical protein 3203 60.22 0 3436014..3436571 - 185 86358872 rpoE4 RHE_CH03273 - RNA polymerase sigma factor 3204 56.04 -1 3436581..3436787 - 68 86358873 - RHE_CH03274 - hypothetical protein 3205 56.23 -1 3437035..3437829 + 264 86358874 tcrX RHE_CH03275 - two-component response regulator 3206 58.49 0 3438060..3439013 + 317 86358875 tcrY RHE_CH03276 - two-component sensor histidine kinase protein 3207 63.58 0 3439426..3440787 + 453 86358876 - RHE_CH03277 - putative oxidoreductase 3208 63.09 0 3440803..3442116 + 437 86358877 - RHE_CH03278 - dihydropyrimidine dehydrogenase 3209 56.56 -1 3442276..3444264 + 662 86358878 - RHE_CH03279 - putative 1,4-alpha-glucan branching enzyme protein 3210 53.56 -2 3444334..3444768 - 144 86358879 - RHE_CH03280 - hypothetical protein 3211 57.28 -1 3444833..3445237 - 134 86358880 - RHE_CH03281 - putative dehydrogenase protein 3212 58.39 -1 3445415..3447094 + 559 86358881 malL RHE_CH03282 - oligosaccharide alpha-1,6-glucosidase protein 3213 63.90 0 3447193..3448203 - 336 86358882 ftrA RHE_CH03283 - transcriptional activator FtrA 3214 64.23 0 3448266..3448676 + 136 86358883 - RHE_CH03284 - putative rhodanese-related sulfurtransferase protein 3215 63.54 0 3448716..3449738 - 340 86358884 - RHE_CH03285 - alcohol dehydrogenase protein 3216 60.23 0 3449715..3450740 + 341 86358885 - RHE_CH03286 - LysR family transcriptional regulator 3217 59.26 0 3450839..3451270 + 143 86358886 - RHE_CH03287 - hypothetical protein 3218 62.50 0 3451273..3451680 + 135 86358887 - RHE_CH03288 - two-component response regulator protein 3219 60.06 0 3451545..3452195 - 216 86358888 - RHE_CH03289 - TetR family transcriptional regulator 3220 62.84 0 3452495..3453748 + 417 162329628 amaB RHE_CH03290 - allantoate amidohydrolase 3221 58.54 0 3453748..3454338 + 196 86358890 - RHE_CH03291 - hypothetical protein 3222 62.27 0 3454335..3455789 + 484 86358891 dht RHE_CH03292 - dihydropyrimidinase 3223 64.01 0 3455848..3456261 - 137 86358892 - RHE_CH03293 - hypothetical protein 3224 63.23 0 3456356..3457141 + 261 86358893 - RHE_CH03294 - nitrate/sulfonate ABC transporter, ATP-binding protein 3225 61.29 0 3457376..3458305 + 309 86358894 - RHE_CH03295 - nitrate/sulfonate ABC transporter, permease protein 3226 64.01 0 3458302..3459429 + 375 86358895 - RHE_CH03296 - nitrate/sulfonate ABC transporter, permease protein 3227 60.15 0 3459525..3460460 + 311 86358896 - RHE_CH03297 - nitrate/sulfonate ABC transporter, substrate-binding protein 3228 63.06 0 3460849..3462039 + 396 86358897 - RHE_CH03298 - HlyD family protein secretion protein 3229 61.40 0 3462053..3465373 + 1106 86358898 - RHE_CH03299 - acriflavin resistance efflux transporter 3230 63.24 0 3465472..3466083 - 203 86358899 ureG RHE_CH03300 - urease accessory protein 3231 65.18 +1 3466172..3466843 - 223 86358900 ureF RHE_CH03301 - urease accessory protein 3232 57.35 -1 3466849..3467535 - 228 86358901 ureE RHE_CH03302 - urease accessory protein 3233 61.03 0 3467519..3468370 - 283 86358902 - RHE_CH03303 - urease-associated protein 3234 60.71 0 3468714..3469385 - 223 86358903 - RHE_CH03304 - urease-associated protein 3235 63.40 0 3469418..3471130 - 570 86358904 ureC RHE_CH03305 - urease subunit alpha 3236 63.38 0 3471134..3471772 - 212 86358905 - RHE_CH03306 - urease-associated protein 3237 60.25 0 3471774..3472178 - 134 86358906 - RHE_CH03307 - urease-associated protein 3238 65.36 +1 3472196..3472501 - 101 86358907 ureB RHE_CH03308 - urease subunit beta 3239 62.70 0 3472512..3472763 - 83 86358908 - RHE_CH03309 - urease-associated protein 3240 62.38 0 3472773..3473075 - 100 86358909 ureA RHE_CH03310 - urease subunit gamma 3241 65.48 +1 3473104..3473775 - 223 86358910 ureD RHE_CH03311 - urease accessory protein 3242 62.79 0 3474073..3474768 - 231 86358911 - RHE_CH03312 - urea or short-chain amide ABC transporter, ATP-binding protein 3243 60.31 0 3474788..3475306 - 172 86358912 - RHE_CH03313 - hypothetical protein 3244 59.66 0 3475382..3476137 - 251 86358913 - RHE_CH03314 - urea or short-chain amide ABC transporter, ATP-binding protein 3245 63.14 0 3476143..3477306 - 387 86358914 - RHE_CH03315 - urea or short-chain amide ABC transporter, permease protein 3246 62.03 0 3477303..3478919 - 538 86358915 - RHE_CH03316 - urea or short-chain amide ABC transporter, permease protein 3247 59.47 0 3479029..3480321 - 430 86358916 - RHE_CH03317 - urea or short-chain amide ABC transporter, substrate-binding protein 3248 62.49 0 3480503..3482587 - 694 86358917 - RHE_CH03318 - putative phosphatase protein 3249 63.94 0 3485963..3486880 + 305 86358918 - RHE_CH03320 - two-component response regulator protein 3250 60.96 0 3487057..3488178 - 373 86358919 braC2 RHE_CH03321 - amino acid ABC transporter, substrate-binding protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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