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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 271 60.28 0 293111..293611 + 166 86355940 - RHE_CH00282 - MarR family transcriptional regulator 272 63.71 0 293612..294085 - 157 86355941 - RHE_CH00283 - hypothetical protein 273 59.26 0 294089..294439 - 116 86355942 - RHE_CH00284 - arsenate reductase protein 274 64.12 0 294525..295586 - 353 86355943 - RHE_CH00285 - hypothetical protein 275 65.07 +1 296158..296721 + 187 86355944 - RHE_CH00287 - methylated-DNA-[protein]-cysteine S-methyltransferase protein 276 63.27 0 296738..297472 - 244 86355945 - RHE_CH00288 - putative oxidoreductase protein 277 66.19 +1 297509..298351 - 280 86355946 - RHE_CH00289 - short chain dehydrogenase 278 60.40 0 298404..298802 - 132 86355947 - RHE_CH00290 - hypothetical protein 279 63.88 0 298903..299799 + 298 86355948 - RHE_CH00291 - LysR family transcriptional regulator 280 61.29 0 299944..300798 + 284 86355949 - RHE_CH00292 - AraC family transcriptional regulator 281 64.10 0 300838..301383 + 181 86355950 - RHE_CH00293 - putative phosphatidylethanolamine-binding protein 282 62.00 0 301467..301937 - 156 86355951 - RHE_CH00294 - putative acetyltransferase protein 283 59.13 0 302165..302695 - 176 86355952 - RHE_CH00295 - putative reductase protein 284 56.11 -1 302939..303724 + 261 86355953 - RHE_CH00296 - hypothetical protein 285 63.40 0 303945..305507 - 520 86355954 guaA RHE_CH00297 - bifunctional GMP synthase/glutamine amidotransferase protein 286 63.54 0 305606..306244 - 212 86355955 pfs RHE_CH00298 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 287 62.22 0 306241..306690 - 149 86355956 - RHE_CH00299 - putative phenylacetic acid degradation protein 288 64.58 0 307031..307843 + 270 86355957 - RHE_CH00300 - hypothetical protein 289 63.93 0 307986..309083 - 365 86355958 - RHE_CH00301 - hypothetical protein 290 63.22 0 309088..310188 - 366 86355959 - RHE_CH00302 - hypothetical protein 291 62.44 0 310188..311726 - 512 86355960 - RHE_CH00303 - hypothetical protein 292 62.12 0 311772..313046 - 424 86355961 - RHE_CH00304 - hypothetical protein 293 66.12 +1 313215..314504 - 429 86355962 sun RHE_CH00305 - tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein 294 58.13 -1 314661..315023 - 120 86355963 - RHE_CH00306 - rare lipoprotein A protein 295 64.14 0 315421..316290 - 289 86355964 - RHE_CH00307 - putative nucleoside-diphosphate-sugar epimerase protein 296 63.90 0 316290..317447 - 385 86355965 - RHE_CH00308 - putative iron-sulfur cluster binding protein 297 61.90 0 317460..318152 - 230 86355966 gstch2 RHE_CH00309 - glutathione S-transferase protein 298 61.03 0 318411..319208 + 265 86355967 upk RHE_CH00310 - undecaprenyl pyrophosphate phosphatase 299 54.39 -2 319423..319764 - 113 86355968 - RHE_CH00311 - hypothetical protein 300 64.83 +1 319879..320859 - 326 86355969 - RHE_CH00312 - NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein 301 60.76 0 320966..321253 - 95 86355970 - RHE_CH00313 - hypothetical protein 302 65.25 +1 321276..321983 - 235 86355971 pyrF RHE_CH00314 - orotidine 5'-phosphate decarboxylase 303 66.15 +1 321989..322570 - 193 86355972 - RHE_CH00315 - hypothetical protein 304 59.83 0 322572..323171 - 199 86355973 - RHE_CH00316 - phosphatidylethanolamine N-methyltransferase/phosphatidyl-N-methylethanolaminen-methyltransfer ase protein 305 60.15 0 323267..324172 - 301 86355974 - RHE_CH00317 - hypothetical protein 306 61.66 0 324227..325345 - 372 86355975 dnaN RHE_CH00318 - DNA polymerase III subunit beta 307 65.56 +1 325438..326520 + 360 86355976 - RHE_CH00319 - methyltransferase protein 308 66.67 +1 326564..326878 + 104 86355977 - RHE_CH00320 - putative endonuclease protein 309 66.67 +1 327034..327501 + 155 86355978 - RHE_CH00321 - hypothetical protein 310 62.45 0 327589..328536 + 315 86355979 gshB RHE_CH00322 - glutathione synthetase 311 68.82 +2 328710..330242 + 510 86355980 - RHE_CH00323 - Mg-chelatase protein 312 53.66 -2 330497..331111 + 204 86355981 - RHE_CH00324 - hypothetical protein 313 63.86 0 331108..332070 - 320 86355982 cysK1 RHE_CH00325 - cysteine synthase protein 314 63.11 0 332218..332835 - 205 86355983 - RHE_CH00326 - amino acid efflux LysE family protein 315 64.56 0 332953..333855 - 300 86355984 - RHE_CH00327 - putative transporter permease protein 316 63.87 0 333968..334432 + 154 86355985 - RHE_CH00328 - AsnC family transcriptional regulator 317 63.78 0 334447..335346 - 299 86355986 - RHE_CH00329 - putative acetyltransferase protein 318 66.24 +1 335346..335816 - 156 86355987 dut RHE_CH00330 - deoxyuridine 5'-triphosphate nucleotidohydrolase 319 63.13 0 335907..337490 + 527 86355988 prfC RHE_CH00331 - peptide chain release factor 3 protein 320 49.44 -2 337818..337997 + 59 86355989 - RHE_CH00332 - hypothetical protein 321 58.17 -1 338242..339312 - 356 86355990 - RHE_CH00333 - putative acetyltransferase protein 322 63.96 0 339628..340848 - 406 86355991 - RHE_CH00334 - HlyD family protein secretion protein 323 65.46 +1 340959..342704 - 581 86355992 - RHE_CH00335 - putative protein transport protein 324 61.97 0 342786..346343 - 1185 86355993 - RHE_CH00336 - hypothetical protein 325 61.94 0 346953..347354 - 133 86355994 - RHE_CH00337 - hypothetical protein 326 65.66 +1 347365..348858 - 497 86355995 - RHE_CH00338 - putative carboxypeptidase-related protein 327 67.91 +1 348982..350271 - 429 86355996 - RHE_CH00339 - cyanate transport protein 328 65.78 +1 350268..350945 - 225 86355997 - RHE_CH00340 - GntR family transcriptional regulator 329 64.21 0 351451..352263 + 270 86355998 - RHE_CH00341 - putative glutamine amidotransferase protein 330 65.34 +1 352386..353594 - 402 86355999 dfp RHE_CH00342 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 331 64.71 0 353753..354517 - 254 86356000 - RHE_CH00343 - short chain dehydrogenase 332 65.46 +1 354643..355554 + 303 86356001 - RHE_CH00344 - LysR family transcriptional regulator 333 65.05 +1 355693..356931 + 412 86356002 - RHE_CH00345 - putative transporter permease protein 334 58.40 -1 356928..357314 + 128 86356003 - RHE_CH00346 - putative biphenyl-2,3-diol 1,2-dioxygenase protein 335 64.08 0 357345..359006 - 553 86356004 hutUch RHE_CH00347 - urocanate hydratase 336 63.94 0 359077..359406 - 109 86356005 - RHE_CH00348 - hypothetical protein 337 64.52 0 359410..360480 - 356 86356006 - RHE_CH00349 - hypothetical protein 338 65.65 +1 360488..361768 - 426 86356007 - RHE_CH00350 - allantoate amidohydrolase 339 64.78 0 361765..363144 - 459 86356008 - RHE_CH00351 - allantoinase protein 340 66.16 +1 363281..364858 - 525 86356009 hutHch RHE_CH00352 - histidine ammonia-lyase protein 341 62.98 0 364949..366523 - 524 86356010 aarF RHE_CH00353 - ubiquinone biosynthesis protein 342 61.65 0 366574..367350 - 258 86356011 ubiE RHE_CH00354 - ubiquinone/menaquinone biosynthesis methyltransferase 343 65.43 +1 367500..368390 + 296 86356012 fpg RHE_CH00355 - formamidopyrimidine-DNA glycosylase 344 63.57 0 368411..369184 + 257 86356013 fadB1 RHE_CH00356 - enoyl-CoA hydratase 345 63.80 0 369376..369654 + 92 86356014 rpsT RHE_CH00357 - 30S ribosomal protein S20 346 62.93 0 370494..372044 + 516 86356015 dnaA RHE_CH00358 - chromosomal replication initiation protein 347 63.07 0 372206..373288 + 360 86356016 - RHE_CH00359 - putative dehydrogenase protein 348 63.84 0 373352..374554 - 400 86356017 hemNch RHE_CH00360 - coproporphyrinogen III oxidase 349 64.50 0 374562..375206 - 214 86356018 - RHE_CH00361 - putative deoxyribonucleotide triphosphate pyrophosphatase 350 61.39 0 375207..375623 - 138 86356019 - RHE_CH00362 - lactoylglutathione lyase protein 351 63.33 0 375629..376348 - 239 86356020 rph RHE_CH00363 - ribonuclease PH 352 63.23 0 376458..377564 + 368 86356021 hrcA RHE_CH00364 - heat-inducible transcription repressor 353 63.84 0 377676..378311 + 211 86356022 grpE RHE_CH00365 - molecular chaperone heat shock protein (hsp-70) 354 62.33 0 378352..379296 - 314 86356023 iunH1 RHE_CH00366 - inosine-uridine preferring nucleoside hydrolase protein 355 62.44 0 379578..380003 + 141 86356024 hsp RHE_CH00367 - molecular chaperone small heat shock protein 356 56.98 -1 380050..380307 + 85 86356025 - RHE_CH00368 - hypothetical protein 357 63.35 0 380592..381284 - 230 86356026 trmB RHE_CH00369 - tRNA (guanine-N(7))-methyltransferase 358 63.64 0 381290..382543 - 417 86356027 metK RHE_CH00370 - S-adenosylmethionine synthetase 359 59.05 0 382724..383143 - 139 86356028 - RHE_CH00371 - transcriptional regulator protein 360 62.65 0 383304..384896 - 530 86356029 lnt RHE_CH00372 - apolipoprotein N-acyltransferase 361 64.75 0 385008..386153 - 381 86356030 - RHE_CH00373 - putative hemolysin protein 362 58.91 0 386150..386665 - 171 86356031 - RHE_CH00374 - hypothetical protein 363 63.72 0 386665..387717 - 350 86356032 phoH RHE_CH00375 - phosphate starvation inducible protein 364 62.70 0 387736..389145 - 469 86356033 - RHE_CH00376 - putative 2-methylthioadenine synthetase (miaB-like) protein 365 66.67 +1 389195..389929 - 244 86356034 olsA RHE_CH00377 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (phospholipid/glycerol acyltransferase) protein 366 60.37 0 390020..390448 - 142 86356035 fur RHE_CH00378 - ferric uptake regulation protein 367 64.65 0 390528..391022 - 164 86356036 rimI RHE_CH00379 - ribosomal-protein-alanine N-acetyltransferase protein 368 64.86 +1 391025..391687 - 220 86356037 - RHE_CH00380 - O-sialoglycoprotein endopeptidase protein 369 59.26 0 391775..392341 - 188 86356038 nifUch1 RHE_CH00381 - nitrogen fixation protein 370 64.84 +1 392451..392942 - 163 86356039 - RHE_CH00382 - putative universal stress protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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