version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3124 66.11 +1 3352684..3353586 - 300 86358793 ampR RHE_CH03193 - LysR family transcriptional regulator 3125 61.96 0 3353740..3354864 + 374 162329629 ampC RHE_CH03194 - beta-lactamase 3126 58.91 0 3355243..3356196 + 317 86358795 - RHE_CH03195 - UDP-glucose 4-epimerase protein 3127 61.32 0 3356282..3357460 + 392 86358796 - RHE_CH03196 - glycosyltransferase 3128 64.94 +1 3357439..3360453 + 1004 86358797 - RHE_CH03197 - putative polysaccharide deacetylase/methyltransferase protein 3129 60.30 0 3360450..3361532 + 360 86358798 - RHE_CH03198 - glycosyltransferase 3130 58.23 -1 3361426..3363285 + 619 86358799 - RHE_CH03199 - putative surface saccharide ABC transporter, ATP-binding and permease protein 3131 57.93 -1 3363291..3364400 + 369 86358800 - RHE_CH03200 - glycosyltransferase 3132 50.79 -2 3365011..3365262 - 83 86358801 - RHE_CH03201 - hypothetical protein 3133 52.78 -2 3365522..3365881 - 119 86358802 - RHE_CH03202 - hypothetical protein 3134 54.32 -2 3366349..3366672 - 107 86358803 - RHE_CH03203 - hypothetical protein 3135 61.86 0 3366700..3367407 - 235 86358804 - RHE_CH03204 - hypothetical protein 3136 60.95 0 3367404..3368453 - 349 86358805 - RHE_CH03205 - hypothetical protein 3137 61.50 0 3368634..3368846 - 70 86358806 - RHE_CH03206 - hypothetical protein 3138 59.62 0 3368867..3370711 - 614 86358807 - RHE_CH03207 - hypothetical protein 3139 55.40 -1 3370721..3371146 - 141 86358808 - RHE_CH03208 - transcriptional regulator protein 3140 54.85 -2 3371230..3371940 - 236 86358809 - RHE_CH03209 - putative methyltransferase protein 3141 58.51 0 3372369..3373349 + 326 86358810 pssV RHE_CH03210 - exopolysaccharide production protein 3142 56.98 -1 3373935..3375008 + 357 86358811 pssT1 RHE_CH03212 - endo-1,4-beta-xylanase protein 3143 58.07 -1 3375041..3376192 + 383 86358812 pssS RHE_CH03213 - glycosyltransferase protein 3144 59.41 0 3376189..3376698 + 169 86358813 pssR RHE_CH03214 - acetyltransferase protein 3145 58.14 -1 3376695..3377597 + 300 86358814 pssM RHE_CH03215 - ketal pyruvate transferase protein 3146 59.21 0 3377698..3379200 + 500 86358815 pssL RHE_CH03216 - exopolysaccharide polymerization and/or export protein 3147 58.82 0 3379231..3380262 + 343 86358816 pssK RHE_CH03217 - exopolysaccharide polymerization protein 3148 58.88 0 3380274..3381095 + 273 86358817 pssJ RHE_CH03218 - galactosyltransferase protein 3149 56.08 -1 3381173..3382117 + 314 86358818 pssI RHE_CH03219 - glycosyltransferase protein 3150 53.83 -2 3382289..3383254 + 321 86358819 pssH RHE_CH03220 - glycosyltransferase protein 3151 56.36 -1 3383244..3384320 + 358 86358820 pssG RHE_CH03221 - glycosyltransferase protein 3152 59.32 0 3384317..3385201 + 294 86358821 pssF RHE_CH03222 - glycosyltransferase protein 3153 59.04 0 3385198..3386181 + 327 86358822 pssC RHE_CH03223 - glycosyltransferase protein 3154 54.88 -2 3386206..3387579 + 457 86358823 - RHE_CH03224 - hypothetical protein 3155 57.73 -1 3387691..3388149 + 152 86358824 pssD RHE_CH03225 - glucuronosyltransferase protein 3156 57.23 -1 3388146..3388622 + 158 86358825 pssE RHE_CH03226 - glucuronosyltransferase protein 3157 58.50 0 3388662..3389273 - 203 86358826 - RHE_CH03227 - putative acyl-CoA thioesterase/lipase protein 3158 58.10 -1 3389570..3390877 - 435 86358827 prsE RHE_CH03228 - HlyD family protein secretion protein 3159 59.17 0 3390893..3392692 - 599 86358828 prsD RHE_CH03229 - protease/lipase ABC transporter, ATP-binding and permease protein 3160 56.42 -1 3393139..3394758 - 539 86358829 plyA3 RHE_CH03230 - polysaccharidase protein 3161 55.51 -1 3395448..3396155 + 235 86358830 rapAch RHE_CH03231 - autoaggregation protein 3162 57.12 -1 3396482..3397183 - 233 86358831 - RHE_CH03232 - hypothetical protein 3163 57.80 -1 3397183..3399459 - 758 86358832 pssP RHE_CH03233 - exopolysaccharide polymerization protein 3164 61.34 0 3399511..3400224 - 237 86358833 pssO RHE_CH03234 - exopolysaccharide inner membrane protein 3165 58.50 0 3400310..3401521 - 403 86358834 pssN RHE_CH03235 - exopolysaccharide export protein 3166 57.16 -1 3401823..3403232 - 469 86358835 pssT2 RHE_CH03236 - endo-1,4-beta-xylanase (exopolysaccharide export) protein 3167 59.17 0 3403535..3404134 + 199 86358836 - RHE_CH03237 - hypothetical protein 3168 60.32 0 3404415..3405722 + 435 86358837 rkpK RHE_CH03238 - UDP-glucose 6-dehydrogenase protein 3169 58.88 0 3405904..3406686 - 260 86358838 - RHE_CH03239 - serine/threonine specific protein phosphatase protein 3170 61.55 0 3407793..3408398 - 201 86358839 - RHE_CH03240 - esterase/lipase/thioesterase protein 3171 62.06 0 3408409..3409341 - 310 86358840 - RHE_CH03241 - dioxygenase protein 3172 60.16 0 3409477..3410106 - 209 86358841 ung RHE_CH03242 - uracil-DNA glycosylase 3173 62.11 0 3410408..3411832 + 474 86358842 noeK RHE_CH03243 - phosphomannomutase protein 3174 60.44 0 3411835..3413295 + 486 86358843 noeJ RHE_CH03244 - mannose-1-phosphate guanylyltransferase (GDP) protein 3175 58.17 -1 3413430..3413735 + 101 86358844 - RHE_CH03245 - hypothetical protein 3176 56.95 -1 3413779..3414735 - 318 86358845 - RHE_CH03246 - putative endonuclease/exonuclease/phosphatase family protein 3177 59.19 0 3414996..3416012 + 338 86358846 lpsL RHE_CH03247 - UDP-glucuronic acid epimerase protein 3178 59.02 0 3416092..3416601 + 169 86358847 - RHE_CH03248 - hypothetical protein 3179 62.27 0 3417051..3417755 + 234 86358848 - RHE_CH03249 - TetR family transcriptional regulator 3180 67.26 +1 3417752..3418765 + 337 86358849 - RHE_CH03250 - hypothetical protein 3181 64.78 0 3418762..3420507 + 581 86358850 - RHE_CH03251 - ABC transporter ATP-binding protein 3182 63.92 0 3420504..3421631 + 375 86358851 - RHE_CH03252 - ABC transporter permease 3183 61.99 0 3421633..3422745 + 370 86358852 - RHE_CH03253 - ABC transporter permease 3184 65.15 +1 3422876..3423271 + 131 86358853 - RHE_CH03254 - hypothetical protein 3185 62.55 0 3423421..3424464 - 347 86358854 thuBch RHE_CH03255 - myo-inositol 2-dehydrogenase protein 3186 62.72 0 3424474..3425259 - 261 86358855 thuAch RHE_CH03256 - trehalosemaltose utilization protein 3187 58.77 0 3425453..3425794 - 113 86358856 - RHE_CH03257 - methyl viologen/ethidium resistance transmembrane protein 3188 60.32 0 3425813..3426442 - 209 86358857 - RHE_CH03258 - TetR family transcriptional regulator 3189 63.24 0 3426545..3426952 + 135 86358858 - RHE_CH03259 - putative globin-like protein 3190 67.47 +1 3426949..3427320 + 123 86358859 - RHE_CH03260 - hypothetical protein 3191 58.60 0 3427317..3427688 - 123 86358860 - RHE_CH03261 - putative bleomycin resistance protein 3192 59.68 0 3427685..3427999 - 104 86358861 - RHE_CH03262 - hypothetical protein 3193 63.74 0 3428009..3428281 - 90 86358862 - RHE_CH03263 - hypothetical protein 3194 62.25 0 3428278..3428685 - 135 86358863 - RHE_CH03264 - hypothetical protein 3195 62.44 0 3428794..3430119 - 441 86358864 - RHE_CH03265 - putative membrane protein, transduces energy to outer membrane receptors 3196 62.44 0 3430178..3430603 - 141 86358865 - RHE_CH03266 - hypothetical protein 3197 56.28 -1 3430781..3430963 + 60 86358866 hmuP RHE_CH03267 - hemin transport system, hemin uptake protein 3198 60.57 0 3430983..3432032 + 349 86358867 hmuS RHE_CH03268 - hemin transport system, degrading protein 3199 65.48 +1 3432044..3432973 + 309 86358868 hmuT RHE_CH03269 - hemin transport system, hemin-binding protein 3200 68.19 +2 3432976..3434088 + 370 86358869 hmuU RHE_CH03270 - hemin transport system, permease protein 3201 64.28 0 3434110..3434904 + 264 86358870 hmuV RHE_CH03271 - hemin importer ATP-binding subunit 3202 63.77 0 3435052..3435396 + 114 86358871 - RHE_CH03272 - hypothetical protein 3203 60.22 0 3436014..3436571 - 185 86358872 rpoE4 RHE_CH03273 - RNA polymerase sigma factor 3204 56.04 -1 3436581..3436787 - 68 86358873 - RHE_CH03274 - hypothetical protein 3205 56.23 -1 3437035..3437829 + 264 86358874 tcrX RHE_CH03275 - two-component response regulator 3206 58.49 0 3438060..3439013 + 317 86358875 tcrY RHE_CH03276 - two-component sensor histidine kinase protein 3207 63.58 0 3439426..3440787 + 453 86358876 - RHE_CH03277 - putative oxidoreductase 3208 63.09 0 3440803..3442116 + 437 86358877 - RHE_CH03278 - dihydropyrimidine dehydrogenase 3209 56.56 -1 3442276..3444264 + 662 86358878 - RHE_CH03279 - putative 1,4-alpha-glucan branching enzyme protein 3210 53.56 -2 3444334..3444768 - 144 86358879 - RHE_CH03280 - hypothetical protein 3211 57.28 -1 3444833..3445237 - 134 86358880 - RHE_CH03281 - putative dehydrogenase protein 3212 58.39 -1 3445415..3447094 + 559 86358881 malL RHE_CH03282 - oligosaccharide alpha-1,6-glucosidase protein 3213 63.90 0 3447193..3448203 - 336 86358882 ftrA RHE_CH03283 - transcriptional activator FtrA 3214 64.23 0 3448266..3448676 + 136 86358883 - RHE_CH03284 - putative rhodanese-related sulfurtransferase protein 3215 63.54 0 3448716..3449738 - 340 86358884 - RHE_CH03285 - alcohol dehydrogenase protein 3216 60.23 0 3449715..3450740 + 341 86358885 - RHE_CH03286 - LysR family transcriptional regulator 3217 59.26 0 3450839..3451270 + 143 86358886 - RHE_CH03287 - hypothetical protein 3218 62.50 0 3451273..3451680 + 135 86358887 - RHE_CH03288 - two-component response regulator protein 3219 60.06 0 3451545..3452195 - 216 86358888 - RHE_CH03289 - TetR family transcriptional regulator 3220 62.84 0 3452495..3453748 + 417 162329628 amaB RHE_CH03290 - allantoate amidohydrolase 3221 58.54 0 3453748..3454338 + 196 86358890 - RHE_CH03291 - hypothetical protein 3222 62.27 0 3454335..3455789 + 484 86358891 dht RHE_CH03292 - dihydropyrimidinase 3223 64.01 0 3455848..3456261 - 137 86358892 - RHE_CH03293 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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