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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3050 55.56 -1 3266197..3266565 - 122 86358719 - RHE_CH03118 - hypothetical protein 3051 61.75 0 3266883..3267350 - 155 86358720 - RHE_CH03119 - hypothetical protein 3052 62.70 0 3267441..3268700 - 419 86358721 - RHE_CH03120 - RNA polymerase sigma factor protein (sigma-70) 3053 61.07 0 3268697..3269071 - 124 86358722 - RHE_CH03121 - hypothetical protein 3054 63.25 0 3269235..3270728 - 497 86358723 glpKch2 RHE_CH03122 - glycerol kinase protein 3055 60.75 0 3270886..3271662 + 258 86358724 bdhA RHE_CH03123 - D-beta-hydroxybutyrate dehydrogenase protein 3056 63.80 0 3271691..3273157 + 488 86358725 xdhA RHE_CH03124 - xanthine dehydrogenase protein 3057 63.46 0 3273339..3275678 + 779 86358726 xdhB RHE_CH03125 - xanthine dehydrogenase protein 3058 65.19 +1 3275961..3276773 + 270 86358727 xdhC RHE_CH03126 - xanthine dehydrogenase protein 3059 63.67 0 3277141..3277941 + 266 86358728 - RHE_CH03127 - LysR family transcriptional regulator 3060 57.36 -1 3277996..3278328 - 110 86358729 - RHE_CH03128 - hypothetical protein 3061 59.73 0 3278664..3279902 + 412 86358730 - RHE_CH03129 - hypothetical protein 3062 63.46 0 3279899..3281209 + 436 86358731 guaD RHE_CH03130 - guanine deaminase 3063 63.08 0 3281369..3282511 + 380 86358732 lldD3 RHE_CH03131 - L-lactate dehydrogenase (cytochrome) protein 3064 63.27 0 3282560..3283000 - 146 86358733 - RHE_CH03132 - hypothetical protein 3065 62.90 0 3282997..3284325 - 442 86358734 - RHE_CH03133 - putative phosphatase protein 3066 62.86 0 3284336..3286120 - 594 86358735 - RHE_CH03134 - putative hydrolase protein 3067 58.17 -1 3286319..3286930 + 203 86358736 - RHE_CH03135 - CDP-alcohol phosphatidyltransferase protein 3068 63.28 0 3287169..3288200 + 343 86358737 - RHE_CH03136 - hypothetical protein 3069 64.81 +1 3288206..3288853 + 215 86358738 - RHE_CH03137 - hypothetical protein 3070 62.77 0 3288853..3291855 + 1000 86358739 - RHE_CH03138 - hypothetical protein 3071 63.07 0 3291732..3292232 - 166 86358740 allA RHE_CH03139 - ureidoglycolate hydrolase 3072 58.40 -1 3292238..3292600 - 120 86358741 - RHE_CH03140 - hypothetical protein 3073 64.67 0 3292597..3293097 - 166 86358742 - RHE_CH03141 - hypothetical protein 3074 61.36 0 3293097..3294020 - 307 86358743 - RHE_CH03142 - putative chitooligosaccharide deacetylase protein 3075 60.59 0 3294134..3294841 - 235 86358744 - RHE_CH03143 - hypothetical protein 3076 64.31 0 3294956..3296059 - 367 86358745 - RHE_CH03144 - D-amino acid oxidase protein 3077 64.95 +1 3296202..3296900 + 232 86358746 - RHE_CH03145 - hypothetical protein 3078 62.23 0 3296911..3300312 - 1133 86358747 - RHE_CH03146 - two-component sensor histidine kinase/response regulator hybrid protein 3079 62.36 0 3300613..3300960 + 115 86358748 - RHE_CH03147 - hypothetical protein 3080 61.90 0 3301070..3302455 - 461 86358749 - RHE_CH03148 - transporter protein 3081 61.08 0 3302638..3303585 - 315 86358750 dapAch4 RHE_CH03149 - dihydrodipicolinate synthase protein 3082 63.36 0 3303747..3304775 + 342 86358751 - RHE_CH03150 - LacI family transcription regulator 3083 62.83 0 3304895..3305911 + 338 86358752 - RHE_CH03151 - putative DNA alkylation repair protein 3084 66.31 +1 3306142..3307824 + 560 86358753 rhlE2 RHE_CH03152 - ATP-dependent RNA helicase protein 3085 60.71 0 3308142..3309131 + 329 86358754 - RHE_CH03153 - AraC family transcriptional regulator 3086 62.53 0 3309190..3310398 + 402 86358755 - RHE_CH03154 - transporter, permease protein 3087 62.44 0 3310617..3311516 - 299 86358756 - RHE_CH03155 - hypothetical protein 3088 60.14 0 3312066..3313460 + 464 86358757 - RHE_CH03156 - hypothetical protein 3089 61.06 0 3313493..3314401 + 302 86358758 - RHE_CH03157 - hypothetical protein 3090 63.76 0 3314414..3315238 + 274 86358759 - RHE_CH03158 - putative transglutaminase protein 3091 65.26 +1 3315311..3315736 - 141 86358760 - RHE_CH03159 - hypothetical protein 3092 64.08 0 3316083..3317822 - 579 86358761 ilvDch2 RHE_CH03160 - dihydroxy-acid dehydratase 3093 63.46 0 3317884..3319317 - 477 86358762 - RHE_CH03161 - aldehyde dehydrogenase 3094 61.72 0 3319386..3320456 - 356 86358763 gguC RHE_CH03162 - GguC protein 3095 61.55 0 3320498..3321709 - 403 86358764 gguB RHE_CH03163 - xylose ABC transporter, permease protein 3096 58.23 -1 3321706..3323223 - 505 86358765 gguA RHE_CH03164 - xylose ABC transporter, ATP-binding protein 3097 59.72 0 3323341..3324405 - 354 86358766 chvE RHE_CH03165 - xylose ABC transporter, substrate-binding protein 3098 61.81 0 3324677..3325684 + 335 86358767 gbpR RHE_CH03166 - LysR family transcriptional regulator 3099 62.72 0 3325799..3326254 + 151 86358768 - RHE_CH03167 - hypothetical protein 3100 61.00 0 3326550..3327413 + 287 86358769 - RHE_CH03168 - hypothetical protein 3101 61.29 0 3327609..3327887 - 92 86358770 - RHE_CH03169 - hypothetical protein 3102 64.25 0 3328045..3329037 + 330 86358771 idhA RHE_CH03170 - myo-inositol 2-dehydrogenase protein 3103 64.38 0 3329555..3330778 - 407 86358772 - RHE_CH03171 - transcriptional regulator protein 3104 62.44 0 3331104..3332144 + 346 86358773 xylF RHE_CH03172 - xylose ABC transporter, substrate-binding protein 3105 63.66 0 3332255..3333718 + 487 86358774 xylH RHE_CH03173 - xylose ABC transporter, permease protein 3106 63.60 0 3333732..3334514 + 260 86358775 xylG RHE_CH03174 - xylose ABC transporter, ATP-binding protein 3107 59.33 0 3334814..3335113 - 99 86358776 - RHE_CH03176 - hypothetical protein 3108 61.63 0 3335463..3335720 + 85 86358777 - RHE_CH03177 - hypothetical protein 3109 55.56 -1 3336259..3336474 + 71 86358778 - RHE_CH03178 - hypothetical protein 3110 51.42 -2 3336523..3336981 + 152 86358779 - RHE_CH03179 - hypothetical protein 3111 59.83 0 3337307..3338374 + 355 86358780 - RHE_CH03180 - potassium channel protein 3112 53.82 -2 3339564..3341501 + 645 86358781 - RHE_CH03181 - cell surface saccharide saccharide acetylase 3113 60.35 0 3341647..3342549 - 300 86358782 - RHE_CH03182 - acetyltransferase protein 3114 52.49 -2 3342838..3343239 + 133 86358783 - RHE_CH03183 - hypothetical protein 3115 63.52 0 3343700..3345064 + 454 86358784 - RHE_CH03184 - hypothetical protein 3116 52.80 -2 3345459..3345869 - 136 86358785 - RHE_CH03185 - hypothetical protein 3117 62.08 0 3346247..3346573 + 108 86358786 - RHE_CH03186 - hypothetical protein 3118 57.78 -1 3347317..3347586 + 89 86358787 - RHE_CH03187 - hypothetical protein 3119 58.01 -1 3347725..3348267 - 180 86358788 - RHE_CH03188 - acetyltransferase protein 3120 64.16 0 3348640..3349638 - 332 86358789 - RHE_CH03189 - sugar ABC transporter, permease protein 3121 64.32 0 3349673..3350524 - 283 86358790 - RHE_CH03190 - sugar ABC transporter, ATP-binding protein 3122 62.28 0 3350659..3351639 + 326 86358791 - RHE_CH03191 - putative UDP-glucose 4-epimerase protein 3123 62.94 0 3351687..3352679 + 330 86358792 - RHE_CH03192 - sugar ABC transporter, substrate-binding protein 3124 66.11 +1 3352684..3353586 - 300 86358793 ampR RHE_CH03193 - LysR family transcriptional regulator 3125 61.96 0 3353740..3354864 + 374 162329629 ampC RHE_CH03194 - beta-lactamase 3126 58.91 0 3355243..3356196 + 317 86358795 - RHE_CH03195 - UDP-glucose 4-epimerase protein 3127 61.32 0 3356282..3357460 + 392 86358796 - RHE_CH03196 - glycosyltransferase 3128 64.94 +1 3357439..3360453 + 1004 86358797 - RHE_CH03197 - putative polysaccharide deacetylase/methyltransferase protein 3129 60.30 0 3360450..3361532 + 360 86358798 - RHE_CH03198 - glycosyltransferase 3130 58.23 -1 3361426..3363285 + 619 86358799 - RHE_CH03199 - putative surface saccharide ABC transporter, ATP-binding and permease protein 3131 57.93 -1 3363291..3364400 + 369 86358800 - RHE_CH03200 - glycosyltransferase 3132 50.79 -2 3365011..3365262 - 83 86358801 - RHE_CH03201 - hypothetical protein 3133 52.78 -2 3365522..3365881 - 119 86358802 - RHE_CH03202 - hypothetical protein 3134 54.32 -2 3366349..3366672 - 107 86358803 - RHE_CH03203 - hypothetical protein 3135 61.86 0 3366700..3367407 - 235 86358804 - RHE_CH03204 - hypothetical protein 3136 60.95 0 3367404..3368453 - 349 86358805 - RHE_CH03205 - hypothetical protein 3137 61.50 0 3368634..3368846 - 70 86358806 - RHE_CH03206 - hypothetical protein 3138 59.62 0 3368867..3370711 - 614 86358807 - RHE_CH03207 - hypothetical protein 3139 55.40 -1 3370721..3371146 - 141 86358808 - RHE_CH03208 - transcriptional regulator protein 3140 54.85 -2 3371230..3371940 - 236 86358809 - RHE_CH03209 - putative methyltransferase protein 3141 58.51 0 3372369..3373349 + 326 86358810 pssV RHE_CH03210 - exopolysaccharide production protein 3142 56.98 -1 3373935..3375008 + 357 86358811 pssT1 RHE_CH03212 - endo-1,4-beta-xylanase protein 3143 58.07 -1 3375041..3376192 + 383 86358812 pssS RHE_CH03213 - glycosyltransferase protein 3144 59.41 0 3376189..3376698 + 169 86358813 pssR RHE_CH03214 - acetyltransferase protein 3145 58.14 -1 3376695..3377597 + 300 86358814 pssM RHE_CH03215 - ketal pyruvate transferase protein 3146 59.21 0 3377698..3379200 + 500 86358815 pssL RHE_CH03216 - exopolysaccharide polymerization and/or export protein 3147 58.82 0 3379231..3380262 + 343 86358816 pssK RHE_CH03217 - exopolysaccharide polymerization protein 3148 58.88 0 3380274..3381095 + 273 86358817 pssJ RHE_CH03218 - galactosyltransferase protein 3149 56.08 -1 3381173..3382117 + 314 86358818 pssI RHE_CH03219 - glycosyltransferase protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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