version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2970 59.72 0 3176681..3177961 - 426 86358639 fbcB RHE_CH03037 - ubiquinol-cytochrome-c reductase, cytochrome b subunit protein 2971 60.28 0 3177976..3178554 - 192 86358640 fbcF RHE_CH03038 - ubiquinol-cytochrome-c reductase, iron-sulfur subunit protein 2972 56.38 -1 3178841..3179773 + 310 86358641 - RHE_CH03039 - putative endonuclease/exonuclease/phosphatase family protein 2973 62.07 0 3179729..3181642 - 637 86358642 - RHE_CH03040 - ABC transporter ATP-binding protein 2974 61.04 0 3181805..3182035 + 76 86358643 - RHE_CH03041 - hypothetical protein 2975 60.96 0 3182127..3183983 - 618 86358644 - RHE_CH03042 - ABC transporter ATP-binding protein 2976 66.02 +1 3184368..3184829 + 153 86358645 - RHE_CH03043 - tRNA/rRNA methyltransferase protein 2977 63.02 0 3185027..3186673 + 548 86358646 - RHE_CH03044 - sodium-dependent phosphate transporter protein 2978 59.00 0 3186677..3186937 - 86 86358647 - RHE_CH03045 - hypothetical protein 2979 62.61 0 3187458..3188369 + 303 86358648 hemF RHE_CH03046 - coproporphyrinogen III oxidase 2980 59.85 0 3188472..3188735 + 87 86358649 - RHE_CH03047 - hypothetical protein 2981 60.75 0 3188849..3189034 + 61 86358650 - RHE_CH03048 - hypothetical protein 2982 65.52 +1 3189105..3190238 - 377 86358651 papS RHE_CH03049 - poly(A) polymerase protein 2983 62.06 0 3190355..3191005 - 216 86358652 - RHE_CH03050 - MutT/NUDIX family NTP pyrophosphohydrolase 2984 61.86 0 3191002..3191625 - 207 86358653 - RHE_CH03051 - hypothetical protein 2985 64.88 +1 3191789..3192793 + 334 86358654 - RHE_CH03052 - putative methanol dehydrogenase regulator MoxR-like protein 2986 66.67 +1 3192885..3193727 + 280 86358655 - RHE_CH03053 - hypothetical protein 2987 65.39 +1 3193724..3196537 + 937 86358656 - RHE_CH03054 - hypothetical protein 2988 63.24 0 3196539..3198611 + 690 86358657 - RHE_CH03055 - hypothetical protein 2989 61.14 0 3198809..3200401 - 530 86358658 - RHE_CH03056 - insertion sequence transposase protein 2990 61.16 0 3200475..3200819 - 114 86358659 - RHE_CH03057 - insertion sequence transposase protein 2991 59.90 0 3200816..3201199 - 127 86358660 - RHE_CH03058 - insertion sequence transposase protein 2992 61.59 0 3201262..3201537 + 91 86358661 - RHE_CH03059 - putative acetyltransferase protein 2993 64.47 0 3201538..3202038 - 166 86358662 - RHE_CH03060 - acetyltransferase protein 2994 59.37 0 3202318..3203304 + 328 86358663 - RHE_CH03061 - putative glutathione S-transferase protein 2995 62.50 0 3203311..3203862 - 183 86358664 - RHE_CH03062 - MutT/NUDIX family hydrolase 2996 63.68 0 3203831..3204769 + 312 86358665 - RHE_CH03063 - putative phosphatase protein 2997 58.11 -1 3204928..3205488 + 186 86358666 - RHE_CH03064 - hypothetical protein 2998 63.53 0 3205673..3206182 + 169 86358667 rpoE3 RHE_CH03065 - RNA polymerase sigma factor protein (sigma-24) 2999 64.72 0 3206151..3207023 + 290 86358668 - RHE_CH03066 - hypothetical protein 3000 59.89 0 3207366..3209048 - 560 162329632 leuA2 RHE_CH03067 - 2-isopropylmalate synthase 3001 64.80 0 3209422..3210651 - 409 86358670 - RHE_CH03068 - benzoate transporter protein 3002 59.32 0 3210802..3211386 - 194 86358671 clpP3 RHE_CH03069 - ATP-dependent Clp protease proteolytic subunit 3003 62.60 0 3211618..3212379 + 253 86358672 - RHE_CH03070 - hypothetical protein 3004 58.49 0 3212512..3212976 - 154 86358673 - RHE_CH03071 - 7-cyano-7-deazaguanine reductase 3005 61.86 0 3212976..3213890 - 304 86358674 - RHE_CH03072 - cation efflux protein 3006 66.07 +1 3214087..3214758 - 223 86358675 - RHE_CH03073 - hypothetical protein 3007 57.92 -1 3214773..3215012 - 79 86358676 - RHE_CH03074 - hypothetical protein 3008 62.88 0 3215235..3217424 - 729 86358677 trpE RHE_CH03075 - anthranilate synthase 3009 60.65 0 3217693..3219951 - 752 86358678 - RHE_CH03076 - outer membrane iron receptor protein 3010 62.38 0 3221471..3223150 - 559 86358679 fhs RHE_CH03078 - formate--tetrahydrofolate ligase 3011 58.86 0 3223739..3225262 - 507 86358680 - RHE_CH03079 - hypothetical protein 3012 58.95 0 3225725..3226450 + 241 86358681 - RHE_CH03080 - LuxR family transcriptional regulator 3013 59.62 0 3226588..3226956 + 122 86358682 - RHE_CH03081 - hypothetical protein 3014 60.48 0 3226977..3228107 - 376 86358683 - RHE_CH03082 - hypothetical protein 3015 61.64 0 3228246..3229319 - 357 86358684 - RHE_CH03083 - hypothetical protein 3016 62.52 0 3229392..3229994 - 200 86358685 tdk RHE_CH03084 - thymidine kinase 3017 61.34 0 3230231..3231187 + 318 86358686 proX RHE_CH03085 - proline/glycine betaine ABC transporter, substrate-binding protein 3018 62.29 0 3231262..3232107 + 281 86358687 proW RHE_CH03086 - proline/glycine betaine ABC transporter, permease protein 3019 65.34 +1 3232104..3233156 + 350 86358688 proV RHE_CH03087 - proline/glycine betaine ABC transporter, ATP-binding protein 3020 59.47 0 3233188..3233937 + 249 86358689 - RHE_CH03088 - hypothetical protein 3021 56.60 -1 3234046..3234363 + 105 86358690 nolRch RHE_CH03089 - ArsR family transcriptional regulator 3022 61.61 0 3234635..3235960 + 441 86358691 - RHE_CH03090 - beta amino acid--pyruvate transaminase 3023 58.22 -1 3236039..3236914 - 291 86358692 - RHE_CH03091 - putative phosphohydrolase protein 3024 45.96 -2 3236977..3237261 - 94 86358693 - RHE_CH03092 - hypothetical protein 3025 62.41 0 3237413..3238516 + 367 86358694 braC1 RHE_CH03093 - amino acid ABC transporter, substrate-binding protein 3026 62.60 0 3239026..3240723 + 565 86358695 adeC1 RHE_CH03094 - adenine deaminase protein 3027 62.14 0 3240745..3242466 - 573 86358696 - RHE_CH03095 - alpha-glucosidase protein 3028 59.01 0 3242751..3244331 + 526 86358697 oppA RHE_CH03096 - oligopeptide ABC transporter, substrate-binding protein 3029 60.71 0 3244380..3245303 + 307 86358698 oppB RHE_CH03097 - oligopeptide ABC transporter, permease protein 3030 63.40 0 3245300..3246217 + 305 86358699 oppC RHE_CH03098 - oligopeptide ABC transporter, permease protein 3031 64.07 0 3246219..3247220 + 333 86358700 oppD RHE_CH03099 - oligopeptide ABC transporter, ATP-binding protein 3032 62.82 0 3247213..3248199 + 328 86358701 oppF RHE_CH03100 - oligopeptide ABC transporter, ATP-binding protein 3033 56.73 -1 3248378..3248719 + 113 86358702 - RHE_CH03101 - hypothetical protein 3034 62.95 0 3248940..3249827 + 295 86358703 kdgK RHE_CH03102 - 2-dehydro-3-deoxygluconokinase protein 3035 64.06 0 3249907..3250098 - 63 86358704 gstI RHE_CH03103 - glutamine synthetase translation inhibitor protein 3036 60.04 0 3250529..3251569 + 346 86358705 glnII RHE_CH03104 - glutamine synthetase II protein 3037 61.42 0 3251805..3252986 + 393 86358706 - RHE_CH03105 - glycosyltransferase 3038 61.93 0 3252993..3254006 - 337 86358707 - RHE_CH03106 - putative lipase protein 3039 61.54 0 3254143..3254610 + 155 86358708 - RHE_CH03107 - MarR family transcriptional regulator 3040 63.78 0 3254866..3256287 - 473 86358709 engA RHE_CH03108 - GTP-binding protein EngA 3041 61.99 0 3256304..3256987 - 227 86358710 - RHE_CH03109 - hypothetical protein 3042 61.54 0 3257088..3257672 - 194 86358711 - RHE_CH03110 - putative nitrate reductase protein 3043 61.82 0 3257792..3258781 + 329 86358712 - RHE_CH03111 - hypothetical protein 3044 52.69 -2 3258994..3260259 - 421 162329631 bacA RHE_CH03112 - transport protein 3045 68.45 +2 3260385..3261503 - 372 86358714 - RHE_CH03113 - putative transporter protein 3046 62.15 0 3261738..3262313 + 191 86358715 - RHE_CH03114 - PadR family transcriptional regulator 3047 62.46 0 3262500..3264020 - 506 86358716 - RHE_CH03115 - oxidoreductase protein 3048 63.64 0 3264320..3265078 - 252 162329630 map2 RHE_CH03116 - methionine aminopeptidase 3049 64.50 0 3265117..3266178 - 353 86358718 - RHE_CH03117 - oxidoreductase protein 3050 55.56 -1 3266197..3266565 - 122 86358719 - RHE_CH03118 - hypothetical protein 3051 61.75 0 3266883..3267350 - 155 86358720 - RHE_CH03119 - hypothetical protein 3052 62.70 0 3267441..3268700 - 419 86358721 - RHE_CH03120 - RNA polymerase sigma factor protein (sigma-70) 3053 61.07 0 3268697..3269071 - 124 86358722 - RHE_CH03121 - hypothetical protein 3054 63.25 0 3269235..3270728 - 497 86358723 glpKch2 RHE_CH03122 - glycerol kinase protein 3055 60.75 0 3270886..3271662 + 258 86358724 bdhA RHE_CH03123 - D-beta-hydroxybutyrate dehydrogenase protein 3056 63.80 0 3271691..3273157 + 488 86358725 xdhA RHE_CH03124 - xanthine dehydrogenase protein 3057 63.46 0 3273339..3275678 + 779 86358726 xdhB RHE_CH03125 - xanthine dehydrogenase protein 3058 65.19 +1 3275961..3276773 + 270 86358727 xdhC RHE_CH03126 - xanthine dehydrogenase protein 3059 63.67 0 3277141..3277941 + 266 86358728 - RHE_CH03127 - LysR family transcriptional regulator 3060 57.36 -1 3277996..3278328 - 110 86358729 - RHE_CH03128 - hypothetical protein 3061 59.73 0 3278664..3279902 + 412 86358730 - RHE_CH03129 - hypothetical protein 3062 63.46 0 3279899..3281209 + 436 86358731 guaD RHE_CH03130 - guanine deaminase 3063 63.08 0 3281369..3282511 + 380 86358732 lldD3 RHE_CH03131 - L-lactate dehydrogenase (cytochrome) protein 3064 63.27 0 3282560..3283000 - 146 86358733 - RHE_CH03132 - hypothetical protein 3065 62.90 0 3282997..3284325 - 442 86358734 - RHE_CH03133 - putative phosphatase protein 3066 62.86 0 3284336..3286120 - 594 86358735 - RHE_CH03134 - putative hydrolase protein 3067 58.17 -1 3286319..3286930 + 203 86358736 - RHE_CH03135 - CDP-alcohol phosphatidyltransferase protein 3068 63.28 0 3287169..3288200 + 343 86358737 - RHE_CH03136 - hypothetical protein 3069 64.81 +1 3288206..3288853 + 215 86358738 - RHE_CH03137 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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