version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2905 63.98 0 3111757..3113616 + 619 86358574 dctB RHE_CH02972 - two-component sensor histidine kinase protein regulating C4-dicarboxylate transport system 2906 64.22 0 3113621..3114967 + 448 86358575 dctD RHE_CH02973 - two-component response regulator protein regulating C4-dicarboxylate transport system 2907 58.17 -1 3114974..3115597 - 207 86358576 lrp RHE_CH02974 - AsnC family leucine-responsive regulatory protein 2908 63.28 0 3115673..3116647 + 324 86358577 trxBch RHE_CH02975 - thioredoxin reductase (NADPH) protein 2909 59.64 0 3116670..3117566 + 298 86358578 - RHE_CH02976 - LysR family transcriptional regulator 2910 56.12 -1 3118119..3118412 + 97 86358579 - RHE_CH02977 - ArsR family transcriptional regulator 2911 64.36 0 3118414..3119499 + 361 86358580 - RHE_CH02978 - MFS family transporter 2912 63.20 0 3119518..3120729 + 403 86358581 nerA RHE_CH02979 - glycerol trinitrate reductase protein 2913 64.17 0 3120955..3121755 + 266 86358582 - RHE_CH02980 - antibiotic resistance (streptomycin kinase) protein 2914 57.87 -1 3121822..3122844 - 340 86358583 - RHE_CH02981 - LacI family transcriptional regulator 2915 59.55 0 3123105..3124439 + 444 86358584 - RHE_CH02982 - sugar ABC transporter, substrate-binding protein 2916 57.49 -1 3124541..3125488 + 315 86358585 - RHE_CH02983 - sugar ABC transporter, permease protein 2917 59.02 0 3125485..3126426 + 313 86358586 - RHE_CH02984 - sugar ABC transporter, permease protein 2918 56.61 -1 3126423..3126611 + 62 86358587 - RHE_CH02985 - hypothetical protein 2919 58.83 0 3126615..3127712 + 365 86358588 - RHE_CH02986 - sugar ABC transporter, ATP-binding protein 2920 59.77 0 3127846..3128700 + 284 86358589 - RHE_CH02987 - sugar ABC transporter, ATP-binding protein 2921 63.87 0 3128712..3130391 + 559 86358590 dak RHE_CH02988 - dihydroxyacetone kinase protein 2922 63.25 0 3130506..3131528 - 340 86358591 - RHE_CH02989 - hypothetical protein 2923 62.46 0 3131611..3132561 + 316 86358592 - RHE_CH02990 - LysR family transcriptional regulator 2924 59.52 0 3132586..3133089 + 167 86358593 - RHE_CH02991 - hypothetical protein 2925 62.85 0 3133196..3133483 - 95 86358594 - RHE_CH02992 - hypothetical protein 2926 60.32 0 3133804..3134811 + 335 86358595 chaA RHE_CH02993 - LPS-associated cation exporter (Ca2+/H+ antiporter) protein 2927 54.78 -2 3134851..3135540 - 229 86358596 - RHE_CH02994 - hypothetical protein 2928 58.97 0 3135636..3136505 - 289 86358597 kdsB2 RHE_CH02995 - 3-deoxy-manno-octulosonate cytidylyltransferase protein 2929 60.58 0 3136553..3137554 - 333 86358598 lpcA RHE_CH02996 - galactosyltransferase protein 2930 61.11 0 3137639..3138052 - 137 86358599 - RHE_CH02997 - hypothetical protein 2931 61.76 0 3138198..3139400 - 400 86358600 aatAch RHE_CH02998 - aspartate aminotransferase 2932 60.60 0 3139907..3141538 + 543 86358601 - RHE_CH02999 - putative glycosyltransferase protein 2933 64.32 0 3141813..3144155 + 780 86358602 - RHE_CH03000 - hypothetical protein 2934 63.91 0 3144145..3144906 + 253 86358603 - RHE_CH03001 - hypothetical protein 2935 64.22 0 3144966..3146108 + 380 86358604 - RHE_CH03002 - putative glucose dehydrogenase B protein 2936 60.08 0 3146113..3146583 - 156 86358605 - RHE_CH03003 - hypothetical protein 2937 62.25 0 3146713..3147573 + 286 86358606 - RHE_CH03004 - putative transporter, permease protein 2938 58.33 -1 3148058..3148273 + 71 86358607 cspA5 RHE_CH03005 - cold shock protein 2939 63.36 0 3148422..3148874 + 150 86358608 - RHE_CH03006 - hypothetical protein 2940 63.23 0 3148936..3149808 - 290 86358609 - RHE_CH03007 - short-chain dehydrogenase protein 2941 58.49 0 3149826..3150302 + 158 86358610 - RHE_CH03008 - putative transcriptional regulator protein 2942 60.78 0 3150299..3151675 - 458 86358611 - RHE_CH03009 - two-component sensor histidine kinase protein 2943 61.25 0 3151750..3152451 - 233 86358612 - RHE_CH03010 - two-component response regulator protein 2944 58.45 0 3152452..3152889 - 145 86358613 - RHE_CH03011 - MarR family transcriptional regulator 2945 63.27 0 3153708..3154325 - 205 86358614 - RHE_CH03012 - hypothetical protein 2946 62.19 0 3154613..3155305 + 230 86358615 - RHE_CH03013 - putative hydrolase protein 2947 60.82 0 3155314..3155655 - 113 86358616 csaA RHE_CH03014 - methionine--tRNA ligase protein 2948 66.18 +1 3155667..3156494 - 275 86358617 proC RHE_CH03015 - pyrroline-5-carboxylate reductase 2949 58.68 0 3156496..3156996 - 166 86358618 - RHE_CH03016 - hypothetical protein 2950 62.84 0 3157385..3157645 - 86 86358619 - RHE_CH03017 - hypothetical protein 2951 63.37 0 3157882..3158700 + 272 86358620 lgt RHE_CH03018 - prolipoprotein diacylglyceryl transferase 2952 65.85 +1 3158719..3159819 + 366 86358621 - RHE_CH03019 - hypothetical protein 2953 62.77 0 3159879..3160724 + 281 86358622 - RHE_CH03020 - hypothetical protein 2954 62.24 0 3160730..3161881 + 383 86358623 - RHE_CH03021 - Xaa-Pro dipeptidase protein 2955 68.25 +2 3161984..3162805 + 273 86358624 - RHE_CH03022 - hypothetical protein 2956 60.99 0 3162911..3163843 + 310 86358625 prsAch RHE_CH03023 - ribose-phosphate pyrophosphokinase 2957 58.87 0 3164056..3165594 - 512 86358626 - RHE_CH03024 - hypothetical protein 2958 59.35 0 3165985..3166599 + 204 162329634 rplY RHE_CH03025 - 50S ribosomal protein L25/general stress protein Ctc 2959 60.88 0 3166791..3169142 + 783 86358628 - RHE_CH03026 - putative sensory box/GGDEF family protein 2960 58.54 0 3169167..3169880 + 237 86358629 - RHE_CH03027 - putative amino acid ABC transporter, substrate-binding protein 2961 60.86 0 3169971..3170693 + 240 86358630 pth RHE_CH03028 - peptidyl-tRNA hydrolase 2962 62.33 0 3170812..3171111 + 99 86358631 - RHE_CH03029 - acetyltransferase protein 2963 56.41 -1 3171121..3171432 - 103 86358632 clpS RHE_CH03030 - ATP-dependent Clp protease adaptor 2964 62.77 0 3171755..3172858 + 367 162329633 - RHE_CH03031 - translation-associated GTPase 2965 64.06 0 3172874..3173947 - 357 86358634 - RHE_CH03032 - hypothetical protein 2966 63.12 0 3174125..3174631 + 168 86358635 - RHE_CH03033 - enoyl-CoA hydratase protein 2967 62.61 0 3174628..3175095 + 155 86358636 - RHE_CH03034 - putative enoyl-CoA hydratase protein 2968 63.07 0 3175114..3175725 - 203 86358637 aptch RHE_CH03035 - adenine phosphoribosyltransferase 2969 60.23 0 3175771..3176655 - 294 86358638 fbcC RHE_CH03036 - ubiquinol--cytochrome c reductase, cytochrome c1 subunit protein 2970 59.72 0 3176681..3177961 - 426 86358639 fbcB RHE_CH03037 - ubiquinol-cytochrome-c reductase, cytochrome b subunit protein 2971 60.28 0 3177976..3178554 - 192 86358640 fbcF RHE_CH03038 - ubiquinol-cytochrome-c reductase, iron-sulfur subunit protein 2972 56.38 -1 3178841..3179773 + 310 86358641 - RHE_CH03039 - putative endonuclease/exonuclease/phosphatase family protein 2973 62.07 0 3179729..3181642 - 637 86358642 - RHE_CH03040 - ABC transporter ATP-binding protein 2974 61.04 0 3181805..3182035 + 76 86358643 - RHE_CH03041 - hypothetical protein 2975 60.96 0 3182127..3183983 - 618 86358644 - RHE_CH03042 - ABC transporter ATP-binding protein 2976 66.02 +1 3184368..3184829 + 153 86358645 - RHE_CH03043 - tRNA/rRNA methyltransferase protein 2977 63.02 0 3185027..3186673 + 548 86358646 - RHE_CH03044 - sodium-dependent phosphate transporter protein 2978 59.00 0 3186677..3186937 - 86 86358647 - RHE_CH03045 - hypothetical protein 2979 62.61 0 3187458..3188369 + 303 86358648 hemF RHE_CH03046 - coproporphyrinogen III oxidase 2980 59.85 0 3188472..3188735 + 87 86358649 - RHE_CH03047 - hypothetical protein 2981 60.75 0 3188849..3189034 + 61 86358650 - RHE_CH03048 - hypothetical protein 2982 65.52 +1 3189105..3190238 - 377 86358651 papS RHE_CH03049 - poly(A) polymerase protein 2983 62.06 0 3190355..3191005 - 216 86358652 - RHE_CH03050 - MutT/NUDIX family NTP pyrophosphohydrolase 2984 61.86 0 3191002..3191625 - 207 86358653 - RHE_CH03051 - hypothetical protein 2985 64.88 +1 3191789..3192793 + 334 86358654 - RHE_CH03052 - putative methanol dehydrogenase regulator MoxR-like protein 2986 66.67 +1 3192885..3193727 + 280 86358655 - RHE_CH03053 - hypothetical protein 2987 65.39 +1 3193724..3196537 + 937 86358656 - RHE_CH03054 - hypothetical protein 2988 63.24 0 3196539..3198611 + 690 86358657 - RHE_CH03055 - hypothetical protein 2989 61.14 0 3198809..3200401 - 530 86358658 - RHE_CH03056 - insertion sequence transposase protein 2990 61.16 0 3200475..3200819 - 114 86358659 - RHE_CH03057 - insertion sequence transposase protein 2991 59.90 0 3200816..3201199 - 127 86358660 - RHE_CH03058 - insertion sequence transposase protein 2992 61.59 0 3201262..3201537 + 91 86358661 - RHE_CH03059 - putative acetyltransferase protein 2993 64.47 0 3201538..3202038 - 166 86358662 - RHE_CH03060 - acetyltransferase protein 2994 59.37 0 3202318..3203304 + 328 86358663 - RHE_CH03061 - putative glutathione S-transferase protein 2995 62.50 0 3203311..3203862 - 183 86358664 - RHE_CH03062 - MutT/NUDIX family hydrolase 2996 63.68 0 3203831..3204769 + 312 86358665 - RHE_CH03063 - putative phosphatase protein 2997 58.11 -1 3204928..3205488 + 186 86358666 - RHE_CH03064 - hypothetical protein 2998 63.53 0 3205673..3206182 + 169 86358667 rpoE3 RHE_CH03065 - RNA polymerase sigma factor protein (sigma-24) 2999 64.72 0 3206151..3207023 + 290 86358668 - RHE_CH03066 - hypothetical protein 3000 59.89 0 3207366..3209048 - 560 162329632 leuA2 RHE_CH03067 - 2-isopropylmalate synthase 3001 64.80 0 3209422..3210651 - 409 86358670 - RHE_CH03068 - benzoate transporter protein 3002 59.32 0 3210802..3211386 - 194 86358671 clpP3 RHE_CH03069 - ATP-dependent Clp protease proteolytic subunit 3003 62.60 0 3211618..3212379 + 253 86358672 - RHE_CH03070 - hypothetical protein 3004 58.49 0 3212512..3212976 - 154 86358673 - RHE_CH03071 - 7-cyano-7-deazaguanine reductase 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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