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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 244 62.98 0 267099..267992 + 297 86355913 - RHE_CH00255 - permease protein 245 62.61 0 267993..268460 - 155 86355914 - RHE_CH00256 - hypothetical protein 246 61.89 0 268633..269616 + 327 86355915 - RHE_CH00257 - hypothetical protein 247 62.77 0 270110..270622 - 170 86355916 - RHE_CH00258 - hypothetical protein 248 65.20 +1 270856..271671 - 271 86355917 - RHE_CH00259 - putative hydrolase protein 249 55.82 -1 271883..272389 + 168 86355918 infC RHE_CH00260 - translation initiation factor IF-3 250 58.33 -1 272698..272901 + 67 86355919 rpmI RHE_CH00261 - 50S ribosomal protein L35 251 60.99 0 272941..273345 + 134 86355920 rplT RHE_CH00262 - 50S ribosomal protein L20 252 61.87 0 273498..274580 + 360 86355921 pheS RHE_CH00263 - phenylalanyl-tRNA synthetase subunit alpha 253 63.66 0 274597..277020 + 807 86355922 pheT RHE_CH00264 - phenylalanyl-tRNA synthetase subunit beta 254 57.22 -1 277072..277431 - 119 86355923 - RHE_CH00265 - hypothetical protein 255 62.45 0 277522..278517 - 331 86355924 - RHE_CH00266 - aldo/keto reductase family oxidoreductase 256 63.26 0 278641..279549 + 302 86355925 - RHE_CH00267 - LysR family transcriptional regulator 257 59.84 0 279577..280074 - 165 86355926 - RHE_CH00268 - hypothetical protein 258 60.03 0 280222..280839 + 205 86355927 - RHE_CH00269 - hypothetical protein 259 62.39 0 280829..281272 - 147 86355928 - RHE_CH00270 - acetyltransferase protein 260 60.96 0 281269..282231 - 320 86355929 - RHE_CH00271 - aldo/keto reductase family oxidoreductase 261 59.78 0 282418..283404 + 328 86355930 - RHE_CH00272 - oxidoreductase protein 262 63.47 0 283408..283782 - 124 86355931 - RHE_CH00273 - hypothetical protein 263 63.00 0 283779..284786 - 335 86355932 - RHE_CH00274 - glycosyltransferase 264 63.74 0 284949..286796 + 615 86355933 - RHE_CH00275 - hypothetical protein 265 66.29 +1 287406..288986 + 526 86355934 xseA RHE_CH00276 - exodeoxyribonuclease VII large subunit 266 62.77 0 288989..289579 + 196 86355935 - RHE_CH00277 - NAD(P)H dehydrogenase (quinone) protein 267 64.26 0 289580..290077 - 165 86355936 - RHE_CH00278 - MarR family transcriptional regulator 268 65.46 +1 290159..291070 + 303 86355937 - RHE_CH00279 - putative transporter, permease protein (related to regulator protein pecM) 269 62.92 0 291018..292271 - 417 86355938 - RHE_CH00280 - aminopeptidase protein 270 61.40 0 292402..293085 - 227 86355939 gstch1 RHE_CH00281 - glutathione S-transferase protein 271 60.28 0 293111..293611 + 166 86355940 - RHE_CH00282 - MarR family transcriptional regulator 272 63.71 0 293612..294085 - 157 86355941 - RHE_CH00283 - hypothetical protein 273 59.26 0 294089..294439 - 116 86355942 - RHE_CH00284 - arsenate reductase protein 274 64.12 0 294525..295586 - 353 86355943 - RHE_CH00285 - hypothetical protein 275 65.07 +1 296158..296721 + 187 86355944 - RHE_CH00287 - methylated-DNA-[protein]-cysteine S-methyltransferase protein 276 63.27 0 296738..297472 - 244 86355945 - RHE_CH00288 - putative oxidoreductase protein 277 66.19 +1 297509..298351 - 280 86355946 - RHE_CH00289 - short chain dehydrogenase 278 60.40 0 298404..298802 - 132 86355947 - RHE_CH00290 - hypothetical protein 279 63.88 0 298903..299799 + 298 86355948 - RHE_CH00291 - LysR family transcriptional regulator 280 61.29 0 299944..300798 + 284 86355949 - RHE_CH00292 - AraC family transcriptional regulator 281 64.10 0 300838..301383 + 181 86355950 - RHE_CH00293 - putative phosphatidylethanolamine-binding protein 282 62.00 0 301467..301937 - 156 86355951 - RHE_CH00294 - putative acetyltransferase protein 283 59.13 0 302165..302695 - 176 86355952 - RHE_CH00295 - putative reductase protein 284 56.11 -1 302939..303724 + 261 86355953 - RHE_CH00296 - hypothetical protein 285 63.40 0 303945..305507 - 520 86355954 guaA RHE_CH00297 - bifunctional GMP synthase/glutamine amidotransferase protein 286 63.54 0 305606..306244 - 212 86355955 pfs RHE_CH00298 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 287 62.22 0 306241..306690 - 149 86355956 - RHE_CH00299 - putative phenylacetic acid degradation protein 288 64.58 0 307031..307843 + 270 86355957 - RHE_CH00300 - hypothetical protein 289 63.93 0 307986..309083 - 365 86355958 - RHE_CH00301 - hypothetical protein 290 63.22 0 309088..310188 - 366 86355959 - RHE_CH00302 - hypothetical protein 291 62.44 0 310188..311726 - 512 86355960 - RHE_CH00303 - hypothetical protein 292 62.12 0 311772..313046 - 424 86355961 - RHE_CH00304 - hypothetical protein 293 66.12 +1 313215..314504 - 429 86355962 sun RHE_CH00305 - tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein 294 58.13 -1 314661..315023 - 120 86355963 - RHE_CH00306 - rare lipoprotein A protein 295 64.14 0 315421..316290 - 289 86355964 - RHE_CH00307 - putative nucleoside-diphosphate-sugar epimerase protein 296 63.90 0 316290..317447 - 385 86355965 - RHE_CH00308 - putative iron-sulfur cluster binding protein 297 61.90 0 317460..318152 - 230 86355966 gstch2 RHE_CH00309 - glutathione S-transferase protein 298 61.03 0 318411..319208 + 265 86355967 upk RHE_CH00310 - undecaprenyl pyrophosphate phosphatase 299 54.39 -2 319423..319764 - 113 86355968 - RHE_CH00311 - hypothetical protein 300 64.83 +1 319879..320859 - 326 86355969 - RHE_CH00312 - NADH dehydrogenase/NADH dehydrogenase (ubiquinone) protein 301 60.76 0 320966..321253 - 95 86355970 - RHE_CH00313 - hypothetical protein 302 65.25 +1 321276..321983 - 235 86355971 pyrF RHE_CH00314 - orotidine 5'-phosphate decarboxylase 303 66.15 +1 321989..322570 - 193 86355972 - RHE_CH00315 - hypothetical protein 304 59.83 0 322572..323171 - 199 86355973 - RHE_CH00316 - phosphatidylethanolamine N-methyltransferase/phosphatidyl-N-methylethanolaminen-methyltransfer ase protein 305 60.15 0 323267..324172 - 301 86355974 - RHE_CH00317 - hypothetical protein 306 61.66 0 324227..325345 - 372 86355975 dnaN RHE_CH00318 - DNA polymerase III subunit beta 307 65.56 +1 325438..326520 + 360 86355976 - RHE_CH00319 - methyltransferase protein 308 66.67 +1 326564..326878 + 104 86355977 - RHE_CH00320 - putative endonuclease protein 309 66.67 +1 327034..327501 + 155 86355978 - RHE_CH00321 - hypothetical protein 310 62.45 0 327589..328536 + 315 86355979 gshB RHE_CH00322 - glutathione synthetase 311 68.82 +2 328710..330242 + 510 86355980 - RHE_CH00323 - Mg-chelatase protein 312 53.66 -2 330497..331111 + 204 86355981 - RHE_CH00324 - hypothetical protein 313 63.86 0 331108..332070 - 320 86355982 cysK1 RHE_CH00325 - cysteine synthase protein 314 63.11 0 332218..332835 - 205 86355983 - RHE_CH00326 - amino acid efflux LysE family protein 315 64.56 0 332953..333855 - 300 86355984 - RHE_CH00327 - putative transporter permease protein 316 63.87 0 333968..334432 + 154 86355985 - RHE_CH00328 - AsnC family transcriptional regulator 317 63.78 0 334447..335346 - 299 86355986 - RHE_CH00329 - putative acetyltransferase protein 318 66.24 +1 335346..335816 - 156 86355987 dut RHE_CH00330 - deoxyuridine 5'-triphosphate nucleotidohydrolase 319 63.13 0 335907..337490 + 527 86355988 prfC RHE_CH00331 - peptide chain release factor 3 protein 320 49.44 -2 337818..337997 + 59 86355989 - RHE_CH00332 - hypothetical protein 321 58.17 -1 338242..339312 - 356 86355990 - RHE_CH00333 - putative acetyltransferase protein 322 63.96 0 339628..340848 - 406 86355991 - RHE_CH00334 - HlyD family protein secretion protein 323 65.46 +1 340959..342704 - 581 86355992 - RHE_CH00335 - putative protein transport protein 324 61.97 0 342786..346343 - 1185 86355993 - RHE_CH00336 - hypothetical protein 325 61.94 0 346953..347354 - 133 86355994 - RHE_CH00337 - hypothetical protein 326 65.66 +1 347365..348858 - 497 86355995 - RHE_CH00338 - putative carboxypeptidase-related protein 327 67.91 +1 348982..350271 - 429 86355996 - RHE_CH00339 - cyanate transport protein 328 65.78 +1 350268..350945 - 225 86355997 - RHE_CH00340 - GntR family transcriptional regulator 329 64.21 0 351451..352263 + 270 86355998 - RHE_CH00341 - putative glutamine amidotransferase protein 330 65.34 +1 352386..353594 - 402 86355999 dfp RHE_CH00342 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 331 64.71 0 353753..354517 - 254 86356000 - RHE_CH00343 - short chain dehydrogenase 332 65.46 +1 354643..355554 + 303 86356001 - RHE_CH00344 - LysR family transcriptional regulator 333 65.05 +1 355693..356931 + 412 86356002 - RHE_CH00345 - putative transporter permease protein 334 58.40 -1 356928..357314 + 128 86356003 - RHE_CH00346 - putative biphenyl-2,3-diol 1,2-dioxygenase protein 335 64.08 0 357345..359006 - 553 86356004 hutUch RHE_CH00347 - urocanate hydratase 336 63.94 0 359077..359406 - 109 86356005 - RHE_CH00348 - hypothetical protein 337 64.52 0 359410..360480 - 356 86356006 - RHE_CH00349 - hypothetical protein 338 65.65 +1 360488..361768 - 426 86356007 - RHE_CH00350 - allantoate amidohydrolase 339 64.78 0 361765..363144 - 459 86356008 - RHE_CH00351 - allantoinase protein 340 66.16 +1 363281..364858 - 525 86356009 hutHch RHE_CH00352 - histidine ammonia-lyase protein 341 62.98 0 364949..366523 - 524 86356010 aarF RHE_CH00353 - ubiquinone biosynthesis protein 342 61.65 0 366574..367350 - 258 86356011 ubiE RHE_CH00354 - ubiquinone/menaquinone biosynthesis methyltransferase 343 65.43 +1 367500..368390 + 296 86356012 fpg RHE_CH00355 - formamidopyrimidine-DNA glycosylase 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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