version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2844 62.73 0 3045950..3046660 + 236 86358513 - RHE_CH02910 - GntR family transcriptional regulator 2845 61.17 0 3046666..3047193 + 175 86358514 - RHE_CH02911 - hypothetical protein 2846 61.46 0 3047321..3047704 - 127 86358515 - RHE_CH02912 - hypothetical protein 2847 68.75 +2 3048283..3048522 + 79 86358516 - RHE_CH02913 - hypothetical protein 2848 57.41 -1 3049012..3049335 + 107 86358517 - RHE_CH02914 - hypothetical protein 2849 59.13 0 3049275..3050057 + 260 86358518 cinRch RHE_CH02915 - autoinducer transcriptional regulator protein 2850 61.56 0 3050272..3050937 + 221 86358519 cinI RHE_CH02916 - N-acyl-L-homoserine lactone (AHL) synthase protein 2851 58.80 0 3051257..3051790 - 177 86358520 - RHE_CH02917 - two-component response regulator protein 2852 54.65 -2 3051864..3053078 - 404 86358521 - RHE_CH02919 - integrase/recombinase protein 2853 54.65 -2 3053075..3053332 - 85 86358522 - RHE_CH02920 - hypothetical protein 2854 54.79 -2 3053334..3053552 - 72 86358523 - RHE_CH02921 - hypothetical protein 2855 54.14 -2 3053775..3054269 + 164 86358524 - RHE_CH02922 - hypothetical protein 2856 54.05 -2 3054572..3055435 - 287 86358525 - RHE_CH02923 - hypothetical protein 2857 51.52 -2 3055532..3056515 - 327 86358526 - RHE_CH02924 - hypothetical protein 2858 46.26 -2 3056914..3058050 - 378 86358527 - RHE_CH02925 - hypothetical protein 2859 52.16 -2 3058230..3058622 - 130 86358528 - RHE_CH02926 - hypothetical protein 2860 60.67 0 3058900..3060984 - 694 86358529 - RHE_CH02927 - Clp protease protein 2861 60.50 0 3060938..3061294 - 118 86358530 - RHE_CH02928 - hypothetical protein 2862 62.71 0 3061354..3061656 - 100 86358531 - RHE_CH02929 - hypothetical protein 2863 58.79 0 3061807..3062631 - 274 86358532 - RHE_CH02930 - hypothetical protein 2864 52.13 -2 3063061..3063342 + 93 86358533 - RHE_CH02931 - hypothetical protein 2865 55.78 -1 3063580..3063882 + 100 86358534 - RHE_CH02932 - hypothetical protein 2866 58.37 -1 3065016..3065642 - 208 86358535 ropB2 RHE_CH02933 - outer membrane protein 2867 51.21 -2 3066137..3066343 - 68 86358536 - RHE_CH02934 - hypothetical protein 2868 62.89 0 3066687..3067427 + 246 86358537 - RHE_CH02935 - hypothetical protein 2869 65.42 +1 3067509..3068309 + 266 86358538 - RHE_CH02936 - hypothetical protein 2870 66.34 +1 3068203..3068508 - 101 86358539 - RHE_CH02937 - hypothetical protein 2871 65.18 +1 3068865..3069335 - 156 86358540 - RHE_CH02938 - hypothetical protein 2872 61.46 0 3069387..3070001 - 204 86358541 - RHE_CH02939 - hypothetical protein 2873 60.83 0 3070065..3070784 - 239 86358542 - RHE_CH02940 - Crp/Fnr family transcriptional regulator 2874 59.76 0 3070917..3071162 + 81 86358543 - RHE_CH02941 - hypothetical protein 2875 58.97 0 3071329..3071757 + 142 86358544 - RHE_CH02942 - hypothetical protein 2876 60.90 0 3071697..3072095 - 132 86358545 - RHE_CH02943 - hypothetical protein 2877 65.67 +1 3072176..3072874 - 232 86358546 - RHE_CH02944 - hypothetical protein 2878 64.76 0 3072877..3073767 - 296 86358547 - RHE_CH02945 - putative permease protein 2879 65.66 +1 3073946..3074740 - 264 86358548 - RHE_CH02946 - AraC family transcriptional regulator 2880 65.27 +1 3074801..3075586 - 261 86358549 - RHE_CH02947 - putative aminoglycoside 3`-phosphotransferase protein 2881 55.88 -1 3075845..3076966 - 373 86358550 - RHE_CH02948 - hypothetical protein 2882 58.50 0 3077078..3077371 - 97 86358551 - RHE_CH02949 - hypothetical protein 2883 62.34 0 3077615..3079672 - 685 86358552 sigA RHE_CH02950 - RNA polymerase sigma factor RpoD 2884 60.02 0 3080173..3081210 - 345 86358553 tdh RHE_CH02951 - L-threonine 3-dehydrogenase 2885 61.45 0 3081429..3082616 - 395 86358554 kbl RHE_CH02952 - 2-amino-3-ketobutyrate coenzyme A ligase 2886 63.24 0 3082707..3084575 - 622 86358555 recQ RHE_CH02953 - ATP-dependent DNA helicase protein 2887 63.81 0 3084575..3086572 - 665 86358556 dnaG RHE_CH02954 - DNA primase 2888 60.49 0 3087238..3088128 + 296 86358557 - RHE_CH02955 - hypothetical protein 2889 59.65 0 3088132..3088587 - 151 86358558 - RHE_CH02956 - hypothetical protein 2890 62.77 0 3088856..3090061 + 401 86358559 carA RHE_CH02957 - carbamoyl phosphate synthase small subunit 2891 60.63 0 3090237..3091346 - 369 86358560 - RHE_CH02958 - putative sulfite oxidase protein 2892 60.83 0 3091716..3094184 - 822 86358561 - RHE_CH02959 - adenylate cyclase protein 2893 60.66 0 3094268..3095365 - 365 86358562 - RHE_CH02960 - amino acid ABC transporter substrate-binding protein 2894 59.81 0 3095828..3096148 + 106 86358563 - RHE_CH02961 - hypothetical protein 2895 62.46 0 3096164..3097567 - 467 86358564 - RHE_CH02962 - multidrug efflux protein 2896 63.78 0 3097713..3098957 - 414 86358565 - RHE_CH02963 - transporter, permease protein 2897 62.21 0 3099332..3100252 - 306 86358566 - RHE_CH02964 - zinc protease protein 2898 66.67 +1 3100716..3101744 + 342 86358567 - RHE_CH02965 - L-iditol 2-dehydrogenase protein 2899 63.69 0 3101914..3105402 + 1162 86358568 carB RHE_CH02966 - carbamoyl phosphate synthase large subunit 2900 62.41 0 3105474..3106928 - 484 86358569 - RHE_CH02967 - putative uracil DNA glycosylase protein 2901 60.18 0 3106928..3108160 - 410 86358570 - RHE_CH02968 - hypothetical protein 2902 60.80 0 3108413..3108889 + 158 86358571 greA RHE_CH02969 - transcription elongation factor GreA 2903 65.62 +1 3108926..3109975 + 349 86358572 lpcC RHE_CH02970 - lipopolysaccharide core biosynthesis mannosyltransferase protein 2904 61.86 0 3110185..3111516 - 443 86358573 dctA RHE_CH02971 - C4-dicarboxylate transporter DctA 2905 63.98 0 3111757..3113616 + 619 86358574 dctB RHE_CH02972 - two-component sensor histidine kinase protein regulating C4-dicarboxylate transport system 2906 64.22 0 3113621..3114967 + 448 86358575 dctD RHE_CH02973 - two-component response regulator protein regulating C4-dicarboxylate transport system 2907 58.17 -1 3114974..3115597 - 207 86358576 lrp RHE_CH02974 - AsnC family leucine-responsive regulatory protein 2908 63.28 0 3115673..3116647 + 324 86358577 trxBch RHE_CH02975 - thioredoxin reductase (NADPH) protein 2909 59.64 0 3116670..3117566 + 298 86358578 - RHE_CH02976 - LysR family transcriptional regulator 2910 56.12 -1 3118119..3118412 + 97 86358579 - RHE_CH02977 - ArsR family transcriptional regulator 2911 64.36 0 3118414..3119499 + 361 86358580 - RHE_CH02978 - MFS family transporter 2912 63.20 0 3119518..3120729 + 403 86358581 nerA RHE_CH02979 - glycerol trinitrate reductase protein 2913 64.17 0 3120955..3121755 + 266 86358582 - RHE_CH02980 - antibiotic resistance (streptomycin kinase) protein 2914 57.87 -1 3121822..3122844 - 340 86358583 - RHE_CH02981 - LacI family transcriptional regulator 2915 59.55 0 3123105..3124439 + 444 86358584 - RHE_CH02982 - sugar ABC transporter, substrate-binding protein 2916 57.49 -1 3124541..3125488 + 315 86358585 - RHE_CH02983 - sugar ABC transporter, permease protein 2917 59.02 0 3125485..3126426 + 313 86358586 - RHE_CH02984 - sugar ABC transporter, permease protein 2918 56.61 -1 3126423..3126611 + 62 86358587 - RHE_CH02985 - hypothetical protein 2919 58.83 0 3126615..3127712 + 365 86358588 - RHE_CH02986 - sugar ABC transporter, ATP-binding protein 2920 59.77 0 3127846..3128700 + 284 86358589 - RHE_CH02987 - sugar ABC transporter, ATP-binding protein 2921 63.87 0 3128712..3130391 + 559 86358590 dak RHE_CH02988 - dihydroxyacetone kinase protein 2922 63.25 0 3130506..3131528 - 340 86358591 - RHE_CH02989 - hypothetical protein 2923 62.46 0 3131611..3132561 + 316 86358592 - RHE_CH02990 - LysR family transcriptional regulator 2924 59.52 0 3132586..3133089 + 167 86358593 - RHE_CH02991 - hypothetical protein 2925 62.85 0 3133196..3133483 - 95 86358594 - RHE_CH02992 - hypothetical protein 2926 60.32 0 3133804..3134811 + 335 86358595 chaA RHE_CH02993 - LPS-associated cation exporter (Ca2+/H+ antiporter) protein 2927 54.78 -2 3134851..3135540 - 229 86358596 - RHE_CH02994 - hypothetical protein 2928 58.97 0 3135636..3136505 - 289 86358597 kdsB2 RHE_CH02995 - 3-deoxy-manno-octulosonate cytidylyltransferase protein 2929 60.58 0 3136553..3137554 - 333 86358598 lpcA RHE_CH02996 - galactosyltransferase protein 2930 61.11 0 3137639..3138052 - 137 86358599 - RHE_CH02997 - hypothetical protein 2931 61.76 0 3138198..3139400 - 400 86358600 aatAch RHE_CH02998 - aspartate aminotransferase 2932 60.60 0 3139907..3141538 + 543 86358601 - RHE_CH02999 - putative glycosyltransferase protein 2933 64.32 0 3141813..3144155 + 780 86358602 - RHE_CH03000 - hypothetical protein 2934 63.91 0 3144145..3144906 + 253 86358603 - RHE_CH03001 - hypothetical protein 2935 64.22 0 3144966..3146108 + 380 86358604 - RHE_CH03002 - putative glucose dehydrogenase B protein 2936 60.08 0 3146113..3146583 - 156 86358605 - RHE_CH03003 - hypothetical protein 2937 62.25 0 3146713..3147573 + 286 86358606 - RHE_CH03004 - putative transporter, permease protein 2938 58.33 -1 3148058..3148273 + 71 86358607 cspA5 RHE_CH03005 - cold shock protein 2939 63.36 0 3148422..3148874 + 150 86358608 - RHE_CH03006 - hypothetical protein 2940 63.23 0 3148936..3149808 - 290 86358609 - RHE_CH03007 - short-chain dehydrogenase protein 2941 58.49 0 3149826..3150302 + 158 86358610 - RHE_CH03008 - putative transcriptional regulator protein 2942 60.78 0 3150299..3151675 - 458 86358611 - RHE_CH03009 - two-component sensor histidine kinase protein 2943 61.25 0 3151750..3152451 - 233 86358612 - RHE_CH03010 - two-component response regulator protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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