version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 192 56.88 -1 215130..215405 + 91 86355861 pilA RHE_CH00202 - component of type IV pilus, pilin subunit protein 193 57.50 -1 215529..216041 + 170 86355862 cpaA RHE_CH00203 - prepilin peptidase protein 194 62.62 0 216152..216967 + 271 86355863 cpaB RHE_CH00204 - pilus assembly protein 195 61.86 0 216980..218476 + 498 86355864 cpaC RHE_CH00205 - pilus assembly secretion protein 196 63.25 0 218530..219231 + 233 86355865 cpaD RHE_CH00206 - pilus assembly protein 197 61.27 0 219246..220523 + 425 86355866 cpaE RHE_CH00207 - pilus assembly protein, response regulator protein 198 62.60 0 220556..222031 + 491 86355867 cpaF RHE_CH00208 - pilus assembly secretion ATP-binding protein 199 59.03 0 222036..223043 + 335 86355868 - RHE_CH00209 - pilus assembly protein 200 63.22 0 223059..224045 + 328 86355869 - RHE_CH00210 - pilus assembly protein 201 64.77 0 224173..224805 + 210 86355870 - RHE_CH00211 - amino acid efflux LysE family protein 202 66.79 +1 224847..225686 - 279 86355871 - RHE_CH00212 - TPR repeat-containing pilus assembly protein 203 63.65 0 225828..227219 + 463 86355872 - RHE_CH00213 - leucine aminopeptidase protein 204 58.89 0 227446..227805 + 119 86355873 - RHE_CH00214 - insertion sequence transposase protein, ISRM11/ISRM2011-2 205 60.00 0 227915..228394 + 159 86355874 - RHE_CH00215 - insertion sequence transposase protein, ISRm2011-2 206 62.68 0 228427..228777 + 116 86355875 - RHE_CH00216 - MarR family transcriptional regulator 207 66.43 +1 228789..229646 + 285 86355876 - RHE_CH00217 - putative endopeptidase-related protein 208 64.94 +1 229643..231034 - 463 86355877 gatA1 RHE_CH00218 - amidase 209 65.97 +1 231034..231897 - 287 86355878 - RHE_CH00219 - peptide ABC transporter permease 210 64.56 0 231901..232848 - 315 86355879 - RHE_CH00220 - peptide ABC transporter permease 211 60.59 0 233113..234642 - 509 86355880 - RHE_CH00221 - peptide ABC transporter substrate-binding protein 212 66.86 +1 234753..235790 - 345 86355881 - RHE_CH00222 - putative peptidase protein 213 57.95 -1 235876..236070 - 64 86355882 - RHE_CH00223 - hypothetical protein 214 64.17 0 236591..239518 - 975 86355883 - RHE_CH00224 - hypothetical protein 215 60.79 0 239637..240521 - 294 86355884 purU RHE_CH00225 - formyltetrahydrofolate deformylase 216 59.69 0 240830..241846 - 338 86355885 exoZ RHE_CH00226 - exopolysaccharide production (acetyltransferase) protein 217 56.98 -1 241900..243066 - 388 86355886 - RHE_CH00227 - hypothetical protein 218 63.81 0 243183..244232 - 349 86355887 egl RHE_CH00228 - endoglucanase precursor (cellulase) protein 219 65.17 +1 244368..245975 + 535 86355888 - RHE_CH00229 - succinoglycan biosynthesis transport protein 220 61.56 0 246037..246369 + 110 86355889 - RHE_CH00230 - hypothetical protein 221 57.02 -1 246548..246910 - 120 86355890 - RHE_CH00231 - hypothetical protein 222 53.41 -2 247189..248244 - 351 86355891 - RHE_CH00232 - hypothetical protein 223 51.26 -2 248675..249550 + 291 86355892 - RHE_CH00233 - hypothetical protein 224 58.60 0 249731..250375 - 214 86355893 - RHE_CH00234 - hypothetical protein 225 56.67 -1 251222..251791 - 189 86355894 - RHE_CH00235 - recombinase 226 55.20 -2 252008..252757 + 249 86355895 - RHE_CH00236 - restriction system protein 227 60.06 0 252882..253244 + 120 86355896 - RHE_CH00237 - insertion sequence transposase protein, ISRm14 228 62.36 0 253241..253588 + 115 86355897 - RHE_CH00238 - insertion sequence transposase protein 229 59.58 0 253661..255226 + 521 86355898 - RHE_CH00239 - insertion sequence transposase protein 230 55.88 -1 255226..255531 + 101 86355899 - RHE_CH00240 - hypothetical protein 231 56.69 -1 256048..257631 - 527 86355900 - RHE_CH00241 - phage integrase family recombinase protein 232 64.71 0 257995..258402 + 135 86355901 - RHE_CH00243 - hypothetical protein 233 63.95 0 258414..258707 - 97 86355902 - RHE_CH00244 - hypothetical protein 234 67.07 +1 258833..259570 + 245 86355903 - RHE_CH00245 - putative glutamine amidotransferase protein 235 63.98 0 259582..260139 + 185 86355904 nodL RHE_CH00246 - maltose O-acetyltransferase protein 236 61.15 0 260213..260665 + 150 86355905 - RHE_CH00247 - hypothetical protein 237 61.32 0 260803..262635 - 610 86355906 lepA RHE_CH00248 - GTP-binding protein LepA 238 60.52 0 262713..263411 - 232 86355907 - RHE_CH00249 - TenA family transcription regulator 239 64.56 0 263547..264116 + 189 86355908 - RHE_CH00250 - LacI family transcription regulator 240 68.21 +2 264141..264659 + 172 86355909 - RHE_CH00251 - acetyltransferase protein 241 64.03 0 264641..265285 - 214 86355910 - RHE_CH00252 - haloacid dehalogenase-like hydrolase 242 62.18 0 265419..266444 + 341 86355911 aphA RHE_CH00253 - acetylpolyamine aminohydrolase protein 243 60.33 0 266454..267005 + 183 86355912 recX RHE_CH00254 - recombination regulator RecX 244 62.98 0 267099..267992 + 297 86355913 - RHE_CH00255 - permease protein 245 62.61 0 267993..268460 - 155 86355914 - RHE_CH00256 - hypothetical protein 246 61.89 0 268633..269616 + 327 86355915 - RHE_CH00257 - hypothetical protein 247 62.77 0 270110..270622 - 170 86355916 - RHE_CH00258 - hypothetical protein 248 65.20 +1 270856..271671 - 271 86355917 - RHE_CH00259 - putative hydrolase protein 249 55.82 -1 271883..272389 + 168 86355918 infC RHE_CH00260 - translation initiation factor IF-3 250 58.33 -1 272698..272901 + 67 86355919 rpmI RHE_CH00261 - 50S ribosomal protein L35 251 60.99 0 272941..273345 + 134 86355920 rplT RHE_CH00262 - 50S ribosomal protein L20 252 61.87 0 273498..274580 + 360 86355921 pheS RHE_CH00263 - phenylalanyl-tRNA synthetase subunit alpha 253 63.66 0 274597..277020 + 807 86355922 pheT RHE_CH00264 - phenylalanyl-tRNA synthetase subunit beta 254 57.22 -1 277072..277431 - 119 86355923 - RHE_CH00265 - hypothetical protein 255 62.45 0 277522..278517 - 331 86355924 - RHE_CH00266 - aldo/keto reductase family oxidoreductase 256 63.26 0 278641..279549 + 302 86355925 - RHE_CH00267 - LysR family transcriptional regulator 257 59.84 0 279577..280074 - 165 86355926 - RHE_CH00268 - hypothetical protein 258 60.03 0 280222..280839 + 205 86355927 - RHE_CH00269 - hypothetical protein 259 62.39 0 280829..281272 - 147 86355928 - RHE_CH00270 - acetyltransferase protein 260 60.96 0 281269..282231 - 320 86355929 - RHE_CH00271 - aldo/keto reductase family oxidoreductase 261 59.78 0 282418..283404 + 328 86355930 - RHE_CH00272 - oxidoreductase protein 262 63.47 0 283408..283782 - 124 86355931 - RHE_CH00273 - hypothetical protein 263 63.00 0 283779..284786 - 335 86355932 - RHE_CH00274 - glycosyltransferase 264 63.74 0 284949..286796 + 615 86355933 - RHE_CH00275 - hypothetical protein 265 66.29 +1 287406..288986 + 526 86355934 xseA RHE_CH00276 - exodeoxyribonuclease VII large subunit 266 62.77 0 288989..289579 + 196 86355935 - RHE_CH00277 - NAD(P)H dehydrogenase (quinone) protein 267 64.26 0 289580..290077 - 165 86355936 - RHE_CH00278 - MarR family transcriptional regulator 268 65.46 +1 290159..291070 + 303 86355937 - RHE_CH00279 - putative transporter, permease protein (related to regulator protein pecM) 269 62.92 0 291018..292271 - 417 86355938 - RHE_CH00280 - aminopeptidase protein 270 61.40 0 292402..293085 - 227 86355939 gstch1 RHE_CH00281 - glutathione S-transferase protein 271 60.28 0 293111..293611 + 166 86355940 - RHE_CH00282 - MarR family transcriptional regulator 272 63.71 0 293612..294085 - 157 86355941 - RHE_CH00283 - hypothetical protein 273 59.26 0 294089..294439 - 116 86355942 - RHE_CH00284 - arsenate reductase protein 274 64.12 0 294525..295586 - 353 86355943 - RHE_CH00285 - hypothetical protein 275 65.07 +1 296158..296721 + 187 86355944 - RHE_CH00287 - methylated-DNA-[protein]-cysteine S-methyltransferase protein 276 63.27 0 296738..297472 - 244 86355945 - RHE_CH00288 - putative oxidoreductase protein 277 66.19 +1 297509..298351 - 280 86355946 - RHE_CH00289 - short chain dehydrogenase 278 60.40 0 298404..298802 - 132 86355947 - RHE_CH00290 - hypothetical protein 279 63.88 0 298903..299799 + 298 86355948 - RHE_CH00291 - LysR family transcriptional regulator 280 61.29 0 299944..300798 + 284 86355949 - RHE_CH00292 - AraC family transcriptional regulator 281 64.10 0 300838..301383 + 181 86355950 - RHE_CH00293 - putative phosphatidylethanolamine-binding protein 282 62.00 0 301467..301937 - 156 86355951 - RHE_CH00294 - putative acetyltransferase protein 283 59.13 0 302165..302695 - 176 86355952 - RHE_CH00295 - putative reductase protein 284 56.11 -1 302939..303724 + 261 86355953 - RHE_CH00296 - hypothetical protein 285 63.40 0 303945..305507 - 520 86355954 guaA RHE_CH00297 - bifunctional GMP synthase/glutamine amidotransferase protein 286 63.54 0 305606..306244 - 212 86355955 pfs RHE_CH00298 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 287 62.22 0 306241..306690 - 149 86355956 - RHE_CH00299 - putative phenylacetic acid degradation protein 288 64.58 0 307031..307843 + 270 86355957 - RHE_CH00300 - hypothetical protein 289 63.93 0 307986..309083 - 365 86355958 - RHE_CH00301 - hypothetical protein 290 63.22 0 309088..310188 - 366 86355959 - RHE_CH00302 - hypothetical protein 291 62.44 0 310188..311726 - 512 86355960 - RHE_CH00303 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0