version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2145 60.48 0 2305290..2305709 - 139 86357814 - RHE_CH02198 - hypothetical protein 2146 64.94 +1 2305715..2306119 - 134 86357815 - RHE_CH02199 - hypothetical protein 2147 61.07 0 2306125..2306571 - 148 86357816 nifUch2 RHE_CH02200 - nitrogen fixation protein 2148 60.65 0 2306882..2307496 + 204 86357817 folE RHE_CH02201 - GTP cyclohydrolase I 2149 60.49 0 2307522..2307974 + 150 86357818 hisI RHE_CH02202 - phosphoribosyl-AMP cyclohydrolase 2150 63.97 0 2308089..2309051 + 320 86357819 - RHE_CH02203 - putative phosphoesterase protein 2151 59.54 0 2309102..2309536 - 144 86357820 - RHE_CH02204 - putative inosine-5`-monophosphate dehydrogenase protein 2152 63.88 0 2309632..2310420 - 262 86357821 - RHE_CH02205 - hypothetical protein 2153 62.48 0 2310679..2311323 + 214 86357822 - RHE_CH02206 - hypothetical protein 2154 62.76 0 2311572..2312057 + 161 86357823 - RHE_CH02207 - hypothetical protein 2155 62.97 0 2312417..2313391 + 324 86357824 pipch2 RHE_CH02208 - proline iminopeptidase protein 2156 59.90 0 2313743..2314348 + 201 86357825 - RHE_CH02209 - hypothetical protein 2157 61.45 0 2314600..2315346 + 248 86357826 - RHE_CH02210 - hypothetical protein 2158 65.53 +1 2315465..2317042 + 525 86357827 - RHE_CH02211 - serine-type D-Ala-D-Ala carboxypeptidase protein 2159 63.41 0 2317155..2317430 + 91 86357828 - RHE_CH02212 - hypothetical protein 2160 62.33 0 2317475..2317912 - 145 86357829 - RHE_CH02213 - hypothetical protein 2161 65.10 +1 2317973..2319376 - 467 86357830 sda RHE_CH02214 - L-serine dehydratase protein 2162 59.64 0 2319781..2320548 + 255 86357831 - RHE_CH02215 - hypothetical protein 2163 61.01 0 2320545..2321534 + 329 86357832 - RHE_CH02216 - hypothetical protein 2164 61.32 0 2321563..2321955 - 130 86357833 - RHE_CH02217 - MerR family transcriptional regulator 2165 62.40 0 2322021..2323427 - 468 86357834 - RHE_CH02218 - magnesium transporter protein 2166 63.64 0 2323668..2324162 + 164 86357835 def2 RHE_CH02219 - peptide deformylase 2167 59.65 0 2324233..2324745 + 170 86357836 - RHE_CH02220 - hypothetical protein 2168 64.23 0 2325041..2325409 + 122 86357837 - RHE_CH02221 - hypothetical protein 2169 64.86 +1 2325858..2326577 + 239 86357838 lipB RHE_CH02223 - lipoyltransferase 2170 58.85 0 2326657..2327577 + 306 86357839 - RHE_CH02224 - permease protein 2171 61.42 0 2327676..2328380 + 234 86357840 - RHE_CH02225 - hypothetical protein 2172 63.38 0 2328489..2330498 + 669 86357841 pccA RHE_CH02226 - propionyl-CoA carboxylase alpha chain protein 2173 64.45 0 2330574..2331701 + 375 86357842 adhCch RHE_CH02227 - formaldehyde dehydrogenase (glutathione)/alcohol dehydrogenase protein 2174 60.10 0 2331779..2332174 + 131 86357843 - RHE_CH02228 - putative acetyltransferase protein 2175 64.53 0 2332185..2332652 + 155 86357844 - RHE_CH02229 - hypothetical protein 2176 62.54 0 2332817..2333131 + 104 86357845 sugE RHE_CH02230 - chaperone-like transmembrane protein 2177 58.52 0 2333181..2333573 - 130 86357846 - RHE_CH02231 - hypothetical protein 2178 61.45 0 2333691..2335223 - 510 86357847 pccB RHE_CH02232 - propionyl-CoA carboxylase beta chain protein 2179 63.40 0 2335260..2335718 - 152 86357848 - RHE_CH02233 - hypothetical protein 2180 65.27 +1 2335786..2336571 - 261 86357849 - RHE_CH02234 - hypothetical protein 2181 60.70 0 2336581..2337234 - 217 86357850 gph1 RHE_CH02235 - phosphoglycolate phosphatase protein 2182 63.52 0 2337231..2338184 - 317 86357851 rluC RHE_CH02236 - pseudouridylate synthase, ribosomal large subunit C protein 2183 62.96 0 2338317..2338694 - 125 86357852 - RHE_CH02237 - CrcB family integral membrane protein 2184 64.17 0 2338761..2339081 + 106 86357853 - RHE_CH02238 - hypothetical protein 2185 62.36 0 2339154..2340197 - 347 86357854 - RHE_CH02239 - hypothetical protein 2186 62.73 0 2340270..2340650 - 126 86357855 - RHE_CH02240 - hypothetical protein 2187 65.17 +1 2341125..2342195 + 356 86357856 gcvT RHE_CH02241 - glycine cleavage system aminomethyltransferase T 2188 58.40 -1 2342218..2342580 + 120 86357857 gcvH RHE_CH02242 - glycine cleavage system protein H 2189 64.15 0 2342580..2345444 + 954 86357858 gcvP RHE_CH02243 - glycine dehydrogenase 2190 63.02 0 2345651..2346691 + 346 86357859 lysM RHE_CH02244 - cell-wall lytic enzyme 2191 61.44 0 2346829..2347134 + 101 86357860 - RHE_CH02245 - flagellar basal body rod protein 2192 56.73 -1 2347236..2347859 + 207 86357861 - RHE_CH02246 - hypothetical protein 2193 64.12 0 2347942..2348334 - 130 86357862 - RHE_CH02247 - hypothetical protein 2194 61.94 0 2348427..2348807 - 126 86357863 - RHE_CH02248 - hypothetical protein 2195 61.67 0 2348820..2350061 - 413 86357864 - RHE_CH02249 - putative selenocysteine lyase protein 2196 64.31 0 2350074..2351348 - 424 86357865 sufD RHE_CH02250 - ABC transporter involved in Fe-S cluster assembly, permease protein 2197 60.58 0 2351373..2352128 - 251 86357866 sufC RHE_CH02251 - ABC transporter involved in Fe-S cluster assembly, ATP-binding protein 2198 48.83 -2 2352233..2352574 - 113 86357867 - RHE_CH02252 - putative endonuclease protein 2199 59.39 0 2352633..2354102 - 489 86357868 sufB RHE_CH02253 - cysteine desulfurase activator complex subunit SufB 2200 65.57 +1 2354295..2355389 - 364 86357869 nifSch RHE_CH02254 - pyridoxal-phosphate-dependent aminotransferase protein (nitrogenase cofactor synthesis protein) 2201 60.91 0 2355679..2356356 + 225 86357870 - RHE_CH02255 - putative alpha/beta hydrolase protein 2202 63.02 0 2356390..2356965 - 191 86357871 - RHE_CH02256 - putative acetyltransferase protein 2203 65.41 +1 2356922..2358034 - 370 86357872 anmK RHE_CH02257 - anhydro-N-acetylmuramic acid kinase 2204 62.13 0 2358166..2359422 + 418 86357873 tyrS RHE_CH02258 - tyrosyl-tRNA synthetase 2205 61.35 0 2359487..2359768 - 93 86357874 - RHE_CH02259 - hypothetical protein 2206 59.45 0 2359961..2361622 + 553 86357875 - RHE_CH02260 - putative trehalose synthase (glycosyl hydrolase) protein 2207 62.43 0 2361635..2365033 - 1132 86357876 - RHE_CH02261 - hypothetical protein 2208 60.34 0 2365159..2365632 + 157 86357877 bcp RHE_CH02262 - bacterioferritin comigratory protein 2209 64.86 +1 2365629..2366456 + 275 86357878 - RHE_CH02263 - hypothetical protein 2210 63.65 0 2366648..2367874 + 408 86357879 - RHE_CH02264 - metalloendopeptidase protein 2211 61.81 0 2367966..2369549 + 527 86357880 rhlE1 RHE_CH02265 - ATP dependent RNA helicase protein 2212 62.57 0 2369641..2370006 + 121 86357881 - RHE_CH02266 - MutT/NUDIX family hydrolase 2213 60.94 0 2369976..2370272 - 98 86357882 - RHE_CH02267 - putative regulator protein of competence-specific genes 2214 59.45 0 2370324..2370905 - 193 86357883 - RHE_CH02268 - 4-hydroxyphenylacetate 3-monooxygenase small chain protein 2215 66.11 +1 2371104..2372186 + 360 86357884 - RHE_CH02269 - putative amino acid ABC transporter, substrate-binding protein 2216 63.27 0 2372252..2372929 + 225 86357885 rpe RHE_CH02270 - D-ribulose-5 phosphate 3-epimerase protein 2217 63.36 0 2372926..2373651 + 241 86357886 - RHE_CH02271 - hypothetical protein 2218 61.43 0 2373690..2374166 + 158 86357887 - RHE_CH02272 - hypothetical protein 2219 63.76 0 2374294..2375601 + 435 86357888 purB RHE_CH02273 - adenylosuccinate lyase 2220 57.71 -1 2376114..2376593 - 159 86357889 - RHE_CH02274 - hypothetical protein 2221 62.19 0 2376699..2377502 - 267 86357890 - RHE_CH02275 - hypothetical protein 2222 63.08 0 2377675..2378232 + 185 86357891 - RHE_CH02276 - hypothetical protein 2223 62.75 0 2378324..2380618 + 764 86357892 - RHE_CH02277 - putative sensory box/GGDEF family protein 2224 58.30 -1 2380890..2381654 + 254 86357893 purC1 RHE_CH02278 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2225 60.08 0 2381670..2381912 + 80 86357894 purS RHE_CH02279 - phosphoribosylformylglycinamidine synthase subunit PurS 2226 57.17 -1 2382000..2382515 + 171 86357895 kptA RHE_CH02280 - RNA 2`-phosphotransferase protein 2227 61.90 0 2382512..2383183 + 223 86357896 purQ RHE_CH02281 - phosphoribosylformylglycinamidine synthase subunit I 2228 65.41 +1 2383272..2383670 + 132 86357897 - RHE_CH02282 - hypothetical protein 2229 60.00 0 2383692..2383946 - 84 86357898 - RHE_CH02283 - hypothetical protein 2230 63.99 0 2384028..2385446 + 472 86357899 - RHE_CH02284 - GntR family transcriptional regulator 2231 61.31 0 2385569..2386147 + 192 86357900 - RHE_CH02285 - hypothetical protein 2232 63.89 0 2386319..2388550 + 743 86357901 purL RHE_CH02286 - phosphoribosylformylglycinamidine synthase II 2233 63.25 0 2388570..2388803 + 77 86357902 - RHE_CH02287 - stress-induced morphogen protein 2234 57.61 -1 2388939..2389976 - 345 86357903 - RHE_CH02288 - oxidoreductase protein 2235 56.67 -1 2389980..2390429 - 149 86357904 aroQ2 RHE_CH02289 - 3-dehydroquinate dehydratase 2236 63.96 0 2390461..2390829 - 122 86357905 - RHE_CH02290 - putative 5-carboxymethyl-2-hydroxymuconate delta isomerase protein 2237 60.98 0 2390845..2391705 - 286 162329638 aroEch2 RHE_CH02291 - shikimate 5-dehydrogenase 2238 58.40 -1 2391724..2392497 - 257 86357907 - RHE_CH02292 - amino acid ABC transporter ATP-binding protein 2239 60.36 0 2392505..2393329 - 274 86357908 - RHE_CH02293 - amino acid ABC transporter substrate-binding protein 2240 58.37 -1 2393374..2394024 - 216 86357909 - RHE_CH02294 - amino acid ABC transporter permease 2241 55.31 -1 2394034..2394702 - 222 86357910 - RHE_CH02295 - amino acid ABC transporter permease 2242 61.19 0 2394751..2395572 - 273 86357911 - RHE_CH02296 - hypothetical protein 2243 60.00 0 2395572..2396306 - 244 86357912 - RHE_CH02297 - GntR family transcriptional regulator 2244 59.96 0 2396560..2397453 + 297 86357913 - RHE_CH02298 - catechol 1,2-dioxygenase protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0