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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 161 65.58 +1 183862..184686 - 274 86355830 dapB1 RHE_CH00170 - dihydrodipicolinate reductase 162 62.81 0 184702..186489 - 595 86355831 - RHE_CH00171 - multidrug ABC transporter ATP-binding protein 163 64.04 0 186614..187639 - 341 86355832 glk RHE_CH00172 - glucokinase 164 63.52 0 187657..188037 - 126 86355833 mgsA RHE_CH00173 - methylglyoxal synthase 165 66.57 +1 188124..189197 - 357 86355834 mepA RHE_CH00174 - penicillin-insensitive murein endopeptidase 166 57.12 -1 189438..191270 + 610 86355835 - RHE_CH00175 - peptide ABC transporter, substrate-binding protein 167 57.67 -1 191421..192509 + 362 86355836 - RHE_CH00176 - peptide ABC transporter, permease protein 168 60.92 0 192509..193657 + 382 86355837 - RHE_CH00177 - peptide ABC transporter, permease protein 169 62.86 0 193663..195291 + 542 86355838 - RHE_CH00178 - peptide ABC transporter, ATP binding protein 170 60.73 0 195300..196259 + 319 86355839 - RHE_CH00179 - hydroxyacid dehydrogenase protein 171 64.46 0 196401..196763 + 120 86355840 - RHE_CH00180 - hypothetical protein 172 61.00 0 196933..198237 + 434 86355841 pncB RHE_CH00181 - nicotinate phosphoribosyltransferase 173 58.70 0 198261..198737 + 158 86355842 - RHE_CH00182 - hypothetical protein 174 58.60 0 199152..199436 + 94 86355843 - RHE_CH00183 - hypothetical protein 175 61.49 0 199409..199756 - 115 86355844 - RHE_CH00184 - hypothetical protein 176 58.81 0 200451..200768 + 105 86355845 - RHE_CH00186 - hypothetical protein 177 60.73 0 201095..202087 + 330 86355846 - RHE_CH00187 - outer membrane lipoprotein 178 61.57 0 202176..203687 + 503 86355847 - RHE_CH00188 - sugar ABC transporter, ATP-binding protein 179 60.78 0 203695..204798 + 367 86355848 - RHE_CH00189 - sugar ABC transporter, permease protein 180 63.68 0 204809..205780 + 323 86355849 - RHE_CH00190 - sugar ABC transporter, permease protein 181 62.31 0 205783..206172 + 129 86355850 cdd RHE_CH00191 - cytidine deaminase 182 62.58 0 206169..206975 + 268 86355851 deoD RHE_CH00192 - purine nucleoside phosphorylase 183 63.32 0 206972..207748 + 258 86355852 deoC RHE_CH00193 - 2-deoxyribose-5-phosphate aldolase protein 184 65.14 +1 207750..209057 + 435 86355853 deoA RHE_CH00194 - thymidine phosphorylase 185 61.58 0 209064..209633 - 189 86355854 - RHE_CH00195 - hypothetical protein 186 61.09 0 209761..210405 - 214 86355855 upp RHE_CH00196 - uracil phosphoribosyltransferase 187 61.82 0 210515..211483 - 322 86355856 add RHE_CH00197 - adenosine deaminase 188 63.93 0 211480..212760 - 426 86355857 deoB RHE_CH00198 - phosphopentomutase 189 60.82 0 212804..213385 - 193 86355858 - RHE_CH00199 - hypothetical protein 190 59.28 0 213385..214020 - 211 86355859 - RHE_CH00200 - hypothetical protein 191 63.75 0 214409..214717 - 102 86355860 - RHE_CH00201 - hypothetical protein 192 56.88 -1 215130..215405 + 91 86355861 pilA RHE_CH00202 - component of type IV pilus, pilin subunit protein 193 57.50 -1 215529..216041 + 170 86355862 cpaA RHE_CH00203 - prepilin peptidase protein 194 62.62 0 216152..216967 + 271 86355863 cpaB RHE_CH00204 - pilus assembly protein 195 61.86 0 216980..218476 + 498 86355864 cpaC RHE_CH00205 - pilus assembly secretion protein 196 63.25 0 218530..219231 + 233 86355865 cpaD RHE_CH00206 - pilus assembly protein 197 61.27 0 219246..220523 + 425 86355866 cpaE RHE_CH00207 - pilus assembly protein, response regulator protein 198 62.60 0 220556..222031 + 491 86355867 cpaF RHE_CH00208 - pilus assembly secretion ATP-binding protein 199 59.03 0 222036..223043 + 335 86355868 - RHE_CH00209 - pilus assembly protein 200 63.22 0 223059..224045 + 328 86355869 - RHE_CH00210 - pilus assembly protein 201 64.77 0 224173..224805 + 210 86355870 - RHE_CH00211 - amino acid efflux LysE family protein 202 66.79 +1 224847..225686 - 279 86355871 - RHE_CH00212 - TPR repeat-containing pilus assembly protein 203 63.65 0 225828..227219 + 463 86355872 - RHE_CH00213 - leucine aminopeptidase protein 204 58.89 0 227446..227805 + 119 86355873 - RHE_CH00214 - insertion sequence transposase protein, ISRM11/ISRM2011-2 205 60.00 0 227915..228394 + 159 86355874 - RHE_CH00215 - insertion sequence transposase protein, ISRm2011-2 206 62.68 0 228427..228777 + 116 86355875 - RHE_CH00216 - MarR family transcriptional regulator 207 66.43 +1 228789..229646 + 285 86355876 - RHE_CH00217 - putative endopeptidase-related protein 208 64.94 +1 229643..231034 - 463 86355877 gatA1 RHE_CH00218 - amidase 209 65.97 +1 231034..231897 - 287 86355878 - RHE_CH00219 - peptide ABC transporter permease 210 64.56 0 231901..232848 - 315 86355879 - RHE_CH00220 - peptide ABC transporter permease 211 60.59 0 233113..234642 - 509 86355880 - RHE_CH00221 - peptide ABC transporter substrate-binding protein 212 66.86 +1 234753..235790 - 345 86355881 - RHE_CH00222 - putative peptidase protein 213 57.95 -1 235876..236070 - 64 86355882 - RHE_CH00223 - hypothetical protein 214 64.17 0 236591..239518 - 975 86355883 - RHE_CH00224 - hypothetical protein 215 60.79 0 239637..240521 - 294 86355884 purU RHE_CH00225 - formyltetrahydrofolate deformylase 216 59.69 0 240830..241846 - 338 86355885 exoZ RHE_CH00226 - exopolysaccharide production (acetyltransferase) protein 217 56.98 -1 241900..243066 - 388 86355886 - RHE_CH00227 - hypothetical protein 218 63.81 0 243183..244232 - 349 86355887 egl RHE_CH00228 - endoglucanase precursor (cellulase) protein 219 65.17 +1 244368..245975 + 535 86355888 - RHE_CH00229 - succinoglycan biosynthesis transport protein 220 61.56 0 246037..246369 + 110 86355889 - RHE_CH00230 - hypothetical protein 221 57.02 -1 246548..246910 - 120 86355890 - RHE_CH00231 - hypothetical protein 222 53.41 -2 247189..248244 - 351 86355891 - RHE_CH00232 - hypothetical protein 223 51.26 -2 248675..249550 + 291 86355892 - RHE_CH00233 - hypothetical protein 224 58.60 0 249731..250375 - 214 86355893 - RHE_CH00234 - hypothetical protein 225 56.67 -1 251222..251791 - 189 86355894 - RHE_CH00235 - recombinase 226 55.20 -2 252008..252757 + 249 86355895 - RHE_CH00236 - restriction system protein 227 60.06 0 252882..253244 + 120 86355896 - RHE_CH00237 - insertion sequence transposase protein, ISRm14 228 62.36 0 253241..253588 + 115 86355897 - RHE_CH00238 - insertion sequence transposase protein 229 59.58 0 253661..255226 + 521 86355898 - RHE_CH00239 - insertion sequence transposase protein 230 55.88 -1 255226..255531 + 101 86355899 - RHE_CH00240 - hypothetical protein 231 56.69 -1 256048..257631 - 527 86355900 - RHE_CH00241 - phage integrase family recombinase protein 232 64.71 0 257995..258402 + 135 86355901 - RHE_CH00243 - hypothetical protein 233 63.95 0 258414..258707 - 97 86355902 - RHE_CH00244 - hypothetical protein 234 67.07 +1 258833..259570 + 245 86355903 - RHE_CH00245 - putative glutamine amidotransferase protein 235 63.98 0 259582..260139 + 185 86355904 nodL RHE_CH00246 - maltose O-acetyltransferase protein 236 61.15 0 260213..260665 + 150 86355905 - RHE_CH00247 - hypothetical protein 237 61.32 0 260803..262635 - 610 86355906 lepA RHE_CH00248 - GTP-binding protein LepA 238 60.52 0 262713..263411 - 232 86355907 - RHE_CH00249 - TenA family transcription regulator 239 64.56 0 263547..264116 + 189 86355908 - RHE_CH00250 - LacI family transcription regulator 240 68.21 +2 264141..264659 + 172 86355909 - RHE_CH00251 - acetyltransferase protein 241 64.03 0 264641..265285 - 214 86355910 - RHE_CH00252 - haloacid dehalogenase-like hydrolase 242 62.18 0 265419..266444 + 341 86355911 aphA RHE_CH00253 - acetylpolyamine aminohydrolase protein 243 60.33 0 266454..267005 + 183 86355912 recX RHE_CH00254 - recombination regulator RecX 244 62.98 0 267099..267992 + 297 86355913 - RHE_CH00255 - permease protein 245 62.61 0 267993..268460 - 155 86355914 - RHE_CH00256 - hypothetical protein 246 61.89 0 268633..269616 + 327 86355915 - RHE_CH00257 - hypothetical protein 247 62.77 0 270110..270622 - 170 86355916 - RHE_CH00258 - hypothetical protein 248 65.20 +1 270856..271671 - 271 86355917 - RHE_CH00259 - putative hydrolase protein 249 55.82 -1 271883..272389 + 168 86355918 infC RHE_CH00260 - translation initiation factor IF-3 250 58.33 -1 272698..272901 + 67 86355919 rpmI RHE_CH00261 - 50S ribosomal protein L35 251 60.99 0 272941..273345 + 134 86355920 rplT RHE_CH00262 - 50S ribosomal protein L20 252 61.87 0 273498..274580 + 360 86355921 pheS RHE_CH00263 - phenylalanyl-tRNA synthetase subunit alpha 253 63.66 0 274597..277020 + 807 86355922 pheT RHE_CH00264 - phenylalanyl-tRNA synthetase subunit beta 254 57.22 -1 277072..277431 - 119 86355923 - RHE_CH00265 - hypothetical protein 255 62.45 0 277522..278517 - 331 86355924 - RHE_CH00266 - aldo/keto reductase family oxidoreductase 256 63.26 0 278641..279549 + 302 86355925 - RHE_CH00267 - LysR family transcriptional regulator 257 59.84 0 279577..280074 - 165 86355926 - RHE_CH00268 - hypothetical protein 258 60.03 0 280222..280839 + 205 86355927 - RHE_CH00269 - hypothetical protein 259 62.39 0 280829..281272 - 147 86355928 - RHE_CH00270 - acetyltransferase protein 260 60.96 0 281269..282231 - 320 86355929 - RHE_CH00271 - aldo/keto reductase family oxidoreductase 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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