version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 122 58.95 0 141425..142279 - 284 86355791 pheA RHE_CH00131 - prephenate dehydratase 123 62.30 0 142290..143045 - 251 86355792 kdsB1 RHE_CH00132 - 3-deoxy-manno-octulosonate cytidylyltransferase 124 61.17 0 143199..143762 + 187 86355793 cycM RHE_CH00133 - cytochrome-c protein 125 62.55 0 143699..145084 - 461 86355794 - RHE_CH00134 - sugar ABC transporter, permease protein 126 60.22 0 145313..146305 + 330 86355795 - RHE_CH00135 - sugar kinase protein 127 63.89 0 146298..146837 - 179 86355796 - RHE_CH00136 - hypothetical protein 128 63.64 0 146819..146917 - 32 86355797 - RHE_CH00137 - hypothetical protein 129 63.67 0 147023..148024 + 333 86355798 - RHE_CH00138 - D-2-hydroxyacid dehydrogenase protein 130 62.87 0 148056..148529 - 157 86355799 - RHE_CH00139 - acetyltransferase protein 131 64.19 0 148526..149293 - 255 86355800 moeB RHE_CH00140 - molybdopterin biosynthesis protein MoeB 132 65.07 +1 149341..150465 - 374 86355801 recF RHE_CH00141 - recombination protein F 133 56.56 -1 150848..151213 + 121 86355802 - RHE_CH00142 - Cro/CI family transcriptional regulator 134 58.67 0 151335..151709 - 124 86355803 - RHE_CH00143 - hypothetical protein 135 61.44 0 151875..153002 - 375 86355804 dnaJ1 RHE_CH00144 - DnaJ family molecular chaperone 136 61.29 0 153088..155004 - 638 86355805 dnaK RHE_CH00145 - molecular chaperone DnaK 137 64.01 0 155282..157612 - 776 86355806 - RHE_CH00146 - penicillin binding protein 138 60.96 0 158145..159038 - 297 86355807 - RHE_CH00147 - hypothetical protein 139 62.78 0 159233..160621 - 462 86355808 dapE1 RHE_CH00148 - hypothetical protein 140 62.31 0 160833..163220 + 795 86355809 - RHE_CH00149 - putative sensory box/GGDEF family protein 141 64.03 0 163227..163643 - 138 86355810 - RHE_CH00150 - MarR family transcriptional regulator 142 62.40 0 164051..167050 + 999 86355811 polA RHE_CH00151 - DNA polymerase I 143 63.45 0 167219..169546 + 775 86355812 ftsK1 RHE_CH00152 - cell division protein 144 56.41 -1 169580..170086 - 168 86355813 - RHE_CH00153 - hypothetical protein 145 66.13 +1 170096..170653 - 185 86355814 gmk1 RHE_CH00154 - guanylate kinase (GMP kinase) protein 146 63.42 0 170698..171837 - 379 86355815 phnM1 RHE_CH00155 - phosphonate metabolism protein 147 61.02 0 171850..172611 - 253 86355816 - RHE_CH00156 - hypothetical protein 148 61.76 0 172686..174029 - 447 86355817 - RHE_CH00157 - phosphonate ABC transporter permease 149 60.42 0 174037..174996 - 319 86355818 - RHE_CH00158 - phosphonate ABC transporter permease 150 61.15 0 175169..176074 - 301 86355819 - RHE_CH00159 - phosphonate ABC transporter substrate-binding protein 151 64.42 0 176162..177007 - 281 86355820 - RHE_CH00160 - phosphonate ABC transporter ATP-binding 152 62.94 0 177125..177742 - 205 86355821 - RHE_CH00161 - acetyltransferase protein 153 64.55 0 177739..178446 - 235 86355822 - RHE_CH00162 - phosphonate ABC transporter ATP-binding 154 64.09 0 178474..179250 - 258 86355823 phnK RHE_CH00163 - phosphonates transport ATP-binding protein 155 62.33 0 179247..180122 - 291 86355824 phnJ RHE_CH00164 - C-P (carbon-phosphorus) lyase component protein 156 65.49 +1 180119..181225 - 368 86355825 phnI RHE_CH00165 - C-P (carbon-phosphorus) lyase component protein 157 64.20 0 181230..181838 - 202 86355826 phnH RHE_CH00166 - carbon-phosphorus lyase complex subunit 158 67.30 +1 181838..182314 - 158 86355827 phnG RHE_CH00167 - C-P (carbon-phosphorus) lyase component protein 159 66.26 +1 182424..183161 + 245 86355828 - RHE_CH00168 - GntR family transcriptional regulator 160 62.89 0 183206..183841 - 211 86355829 gpmA RHE_CH00169 - phosphoglyceromutase 161 65.58 +1 183862..184686 - 274 86355830 dapB1 RHE_CH00170 - dihydrodipicolinate reductase 162 62.81 0 184702..186489 - 595 86355831 - RHE_CH00171 - multidrug ABC transporter ATP-binding protein 163 64.04 0 186614..187639 - 341 86355832 glk RHE_CH00172 - glucokinase 164 63.52 0 187657..188037 - 126 86355833 mgsA RHE_CH00173 - methylglyoxal synthase 165 66.57 +1 188124..189197 - 357 86355834 mepA RHE_CH00174 - penicillin-insensitive murein endopeptidase 166 57.12 -1 189438..191270 + 610 86355835 - RHE_CH00175 - peptide ABC transporter, substrate-binding protein 167 57.67 -1 191421..192509 + 362 86355836 - RHE_CH00176 - peptide ABC transporter, permease protein 168 60.92 0 192509..193657 + 382 86355837 - RHE_CH00177 - peptide ABC transporter, permease protein 169 62.86 0 193663..195291 + 542 86355838 - RHE_CH00178 - peptide ABC transporter, ATP binding protein 170 60.73 0 195300..196259 + 319 86355839 - RHE_CH00179 - hydroxyacid dehydrogenase protein 171 64.46 0 196401..196763 + 120 86355840 - RHE_CH00180 - hypothetical protein 172 61.00 0 196933..198237 + 434 86355841 pncB RHE_CH00181 - nicotinate phosphoribosyltransferase 173 58.70 0 198261..198737 + 158 86355842 - RHE_CH00182 - hypothetical protein 174 58.60 0 199152..199436 + 94 86355843 - RHE_CH00183 - hypothetical protein 175 61.49 0 199409..199756 - 115 86355844 - RHE_CH00184 - hypothetical protein 176 58.81 0 200451..200768 + 105 86355845 - RHE_CH00186 - hypothetical protein 177 60.73 0 201095..202087 + 330 86355846 - RHE_CH00187 - outer membrane lipoprotein 178 61.57 0 202176..203687 + 503 86355847 - RHE_CH00188 - sugar ABC transporter, ATP-binding protein 179 60.78 0 203695..204798 + 367 86355848 - RHE_CH00189 - sugar ABC transporter, permease protein 180 63.68 0 204809..205780 + 323 86355849 - RHE_CH00190 - sugar ABC transporter, permease protein 181 62.31 0 205783..206172 + 129 86355850 cdd RHE_CH00191 - cytidine deaminase 182 62.58 0 206169..206975 + 268 86355851 deoD RHE_CH00192 - purine nucleoside phosphorylase 183 63.32 0 206972..207748 + 258 86355852 deoC RHE_CH00193 - 2-deoxyribose-5-phosphate aldolase protein 184 65.14 +1 207750..209057 + 435 86355853 deoA RHE_CH00194 - thymidine phosphorylase 185 61.58 0 209064..209633 - 189 86355854 - RHE_CH00195 - hypothetical protein 186 61.09 0 209761..210405 - 214 86355855 upp RHE_CH00196 - uracil phosphoribosyltransferase 187 61.82 0 210515..211483 - 322 86355856 add RHE_CH00197 - adenosine deaminase 188 63.93 0 211480..212760 - 426 86355857 deoB RHE_CH00198 - phosphopentomutase 189 60.82 0 212804..213385 - 193 86355858 - RHE_CH00199 - hypothetical protein 190 59.28 0 213385..214020 - 211 86355859 - RHE_CH00200 - hypothetical protein 191 63.75 0 214409..214717 - 102 86355860 - RHE_CH00201 - hypothetical protein 192 56.88 -1 215130..215405 + 91 86355861 pilA RHE_CH00202 - component of type IV pilus, pilin subunit protein 193 57.50 -1 215529..216041 + 170 86355862 cpaA RHE_CH00203 - prepilin peptidase protein 194 62.62 0 216152..216967 + 271 86355863 cpaB RHE_CH00204 - pilus assembly protein 195 61.86 0 216980..218476 + 498 86355864 cpaC RHE_CH00205 - pilus assembly secretion protein 196 63.25 0 218530..219231 + 233 86355865 cpaD RHE_CH00206 - pilus assembly protein 197 61.27 0 219246..220523 + 425 86355866 cpaE RHE_CH00207 - pilus assembly protein, response regulator protein 198 62.60 0 220556..222031 + 491 86355867 cpaF RHE_CH00208 - pilus assembly secretion ATP-binding protein 199 59.03 0 222036..223043 + 335 86355868 - RHE_CH00209 - pilus assembly protein 200 63.22 0 223059..224045 + 328 86355869 - RHE_CH00210 - pilus assembly protein 201 64.77 0 224173..224805 + 210 86355870 - RHE_CH00211 - amino acid efflux LysE family protein 202 66.79 +1 224847..225686 - 279 86355871 - RHE_CH00212 - TPR repeat-containing pilus assembly protein 203 63.65 0 225828..227219 + 463 86355872 - RHE_CH00213 - leucine aminopeptidase protein 204 58.89 0 227446..227805 + 119 86355873 - RHE_CH00214 - insertion sequence transposase protein, ISRM11/ISRM2011-2 205 60.00 0 227915..228394 + 159 86355874 - RHE_CH00215 - insertion sequence transposase protein, ISRm2011-2 206 62.68 0 228427..228777 + 116 86355875 - RHE_CH00216 - MarR family transcriptional regulator 207 66.43 +1 228789..229646 + 285 86355876 - RHE_CH00217 - putative endopeptidase-related protein 208 64.94 +1 229643..231034 - 463 86355877 gatA1 RHE_CH00218 - amidase 209 65.97 +1 231034..231897 - 287 86355878 - RHE_CH00219 - peptide ABC transporter permease 210 64.56 0 231901..232848 - 315 86355879 - RHE_CH00220 - peptide ABC transporter permease 211 60.59 0 233113..234642 - 509 86355880 - RHE_CH00221 - peptide ABC transporter substrate-binding protein 212 66.86 +1 234753..235790 - 345 86355881 - RHE_CH00222 - putative peptidase protein 213 57.95 -1 235876..236070 - 64 86355882 - RHE_CH00223 - hypothetical protein 214 64.17 0 236591..239518 - 975 86355883 - RHE_CH00224 - hypothetical protein 215 60.79 0 239637..240521 - 294 86355884 purU RHE_CH00225 - formyltetrahydrofolate deformylase 216 59.69 0 240830..241846 - 338 86355885 exoZ RHE_CH00226 - exopolysaccharide production (acetyltransferase) protein 217 56.98 -1 241900..243066 - 388 86355886 - RHE_CH00227 - hypothetical protein 218 63.81 0 243183..244232 - 349 86355887 egl RHE_CH00228 - endoglucanase precursor (cellulase) protein 219 65.17 +1 244368..245975 + 535 86355888 - RHE_CH00229 - succinoglycan biosynthesis transport protein 220 61.56 0 246037..246369 + 110 86355889 - RHE_CH00230 - hypothetical protein 221 57.02 -1 246548..246910 - 120 86355890 - RHE_CH00231 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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