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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1632 59.66 0 1764065..1764535 + 156 86357301 rpsG RHE_CH01671 - 30S ribosomal protein S7 1633 59.43 0 1764565..1766664 + 699 86357302 fusA2 RHE_CH01672 - elongation factor G 1634 61.49 0 1766733..1767911 + 392 86357303 tufA RHE_CH01673 - elongation factor Tu 1635 60.84 0 1768218..1768526 + 102 86357304 rpsJ RHE_CH01674 - 30S ribosomal protein S10 1636 61.06 0 1768560..1769201 + 213 86357305 rplC RHE_CH01675 - 50S ribosomal protein L3 1637 61.19 0 1769215..1769835 + 206 86357306 rplD RHE_CH01676 - 50S ribosomal protein L4 1638 56.80 -1 1769832..1770125 + 97 86357307 rplW RHE_CH01677 - 50S ribosomal protein L23 1639 62.13 0 1770137..1770973 + 278 86357308 rplB RHE_CH01678 - 50S ribosomal protein L2 1640 55.20 -2 1770989..1771267 + 92 86357309 rpsS RHE_CH01679 - 30S ribosomal protein S19 1641 64.62 0 1771270..1771659 + 129 86357310 rplV RHE_CH01680 - 50S ribosomal protein L22 1642 62.45 0 1771659..1772393 + 244 86357311 rpsC RHE_CH01681 - 30S ribosomal protein S3 1643 61.11 0 1772432..1772845 + 137 86357312 rplP RHE_CH01682 - 50S ribosomal protein L16 1644 58.21 -1 1772857..1773057 + 66 86357313 rpmC RHE_CH01683 - 50S ribosomal protein L29 1645 56.67 -1 1773070..1773309 + 79 86357314 rpsQ RHE_CH01684 - 30S ribosomal protein S17 1646 58.27 -1 1773569..1773937 + 122 86357315 rplN RHE_CH01685 - 50S ribosomal protein L14 1647 59.55 0 1773950..1774258 + 102 86357316 rplX RHE_CH01686 - 50S ribosomal protein L24 1648 58.96 0 1774251..1774808 + 185 86357317 rplE RHE_CH01687 - 50S ribosomal protein L5 1649 59.80 0 1774841..1775146 + 101 86357318 rpsN RHE_CH01688 - 30S ribosomal protein S14 1650 58.90 0 1775159..1775557 + 132 86357319 rpsH RHE_CH01689 - 30S ribosomal protein S8 1651 58.61 0 1775600..1776133 + 177 86357320 rplF RHE_CH01690 - 50S ribosomal protein L6 1652 64.19 0 1776146..1776508 + 120 86357321 rplR RHE_CH01691 - 50S ribosomal protein L18 1653 63.33 0 1776643..1777212 + 189 86357322 rpsE RHE_CH01692 - 30S ribosomal protein S5 1654 59.05 0 1777226..1777435 + 69 86357323 rpmD RHE_CH01693 - 50S ribosomal protein L30 1655 62.47 0 1777452..1777928 + 158 86357324 rplO RHE_CH01694 - 50S ribosomal protein L15 1656 59.88 0 1778162..1779502 + 446 86357325 secY RHE_CH01695 - preprotein translocase subunit SecY 1657 60.68 0 1779499..1780149 + 216 86357326 adk RHE_CH01696 - adenylate kinase (ATP-AMP transphosphorylase) protein 1658 60.70 0 1780372..1780740 + 122 86357327 rpsM RHE_CH01697 - 30S ribosomal protein S13 1659 62.82 0 1780874..1781263 + 129 86357328 rpsK RHE_CH01698 - 30S ribosomal protein S11 1660 58.36 -1 1781361..1782371 + 336 86357329 rpoA RHE_CH01699 - DNA-directed RNA polymerase subunit alpha 1661 65.72 +1 1782494..1782916 + 140 86357330 rplQ RHE_CH01700 - 50S ribosomal protein L17 1662 60.00 0 1783066..1783470 + 134 86357331 - RHE_CH01701 - hypothetical protein 1663 58.60 0 1783489..1784145 - 218 86357332 - RHE_CH01702 - putative sulfite oxidase subunit YedZ 1664 63.08 0 1784145..1785092 - 315 86357333 - RHE_CH01703 - putative sulfite oxidase subunit YedY 1665 64.22 0 1785432..1787270 + 612 86357334 ilvDch1 RHE_CH01704 - dihydroxy-acid dehydratase 1666 60.34 0 1787330..1787677 - 115 86357335 - RHE_CH01705 - hypothetical protein 1667 60.10 0 1787700..1788080 - 126 86357336 - RHE_CH01706 - hypothetical protein 1668 62.34 0 1788325..1789617 + 430 86357337 degPch3 RHE_CH01707 - serine protease DO-like protein 1669 63.55 0 1789614..1790930 + 438 86357338 - RHE_CH01708 - recombination factor protein RarA 1670 57.05 -1 1790943..1791254 - 103 86357339 - RHE_CH01709 - hypothetical protein 1671 61.76 0 1791706..1792704 - 332 86357340 - RHE_CH01710 - 2-dehydropantoate 2-reductase 1672 62.91 0 1792860..1793711 - 283 86357341 - RHE_CH01711 - dehydrogenase protein 1673 61.37 0 1793825..1794712 + 295 86357342 - RHE_CH01712 - LysR family transcriptional regulator 1674 60.99 0 1794723..1795286 - 187 86357343 - RHE_CH01713 - putative nucleoside 2-deoxyribosyltransferase protein 1675 62.74 0 1795568..1796611 + 347 86357344 - RHE_CH01714 - putative esterase/lipase/thioesterase family protein 1676 62.18 0 1796638..1797261 - 207 86357345 - RHE_CH01715 - hypothetical protein 1677 55.73 -1 1797408..1797782 - 124 86357346 - RHE_CH01716 - putative two-component sensor histidine kinase protein 1678 60.32 0 1797775..1798515 - 246 86357347 - RHE_CH01717 - putative two-component sensor histidine kinase protein 1679 59.45 0 1798617..1798907 - 96 86357348 - RHE_CH01718 - hypothetical protein 1680 64.30 0 1799309..1800364 + 351 86357349 - RHE_CH01719 - LacI family transcription regulator 1681 61.04 0 1800366..1802000 + 544 86357350 - RHE_CH01720 - acyl-CoA transferase protein 1682 65.13 +1 1801993..1802772 + 259 86357351 - RHE_CH01721 - enoyl-CoA hydratase protein 1683 64.10 0 1802772..1804292 + 506 86357352 - RHE_CH01722 - NADP-dependent L-sorbosone dehydrogenase protein 1684 62.47 0 1804381..1805643 + 420 86357353 - RHE_CH01723 - sugar ABC transporter, substrate-binding protein 1685 61.53 0 1805756..1806709 + 317 86357354 - RHE_CH01724 - sugar ABC transporter, permease protein 1686 61.63 0 1806706..1807677 + 323 86357355 - RHE_CH01725 - sugar ABC transporter, permease protein 1687 66.04 +1 1807681..1808796 + 371 86357356 - RHE_CH01726 - sugar ABC transporter, ATP-binding protein 1688 61.14 0 1808812..1810350 + 512 86357357 - RHE_CH01727 - dehydrogenase protein 1689 63.12 0 1810492..1812015 + 507 86357358 - RHE_CH01728 - FAD-dependent L-sorbose dehydrogenase protein 1690 58.63 0 1812028..1813197 + 389 86357359 - RHE_CH01729 - oxidoreductase protein 1691 63.33 0 1813211..1815307 + 698 86357360 - RHE_CH01730 - putative oxidoreductase protein 1692 61.17 0 1815750..1816532 - 260 86357361 xthA1 RHE_CH01731 - exodeoxyribonuclease III protein 1693 63.25 0 1816659..1817156 - 165 86357362 - RHE_CH01732 - hypothetical protein 1694 60.00 0 1817452..1817946 + 164 86357363 - RHE_CH01733 - hypothetical protein 1695 60.42 0 1817995..1818618 - 207 86357364 - RHE_CH01734 - two-component response regulator protein 1696 60.69 0 1818621..1820009 - 462 86357365 - RHE_CH01735 - two-component sensor histidine kinase protein 1697 60.48 0 1820227..1821261 + 344 86357366 - RHE_CH01736 - ubiquinone/menaquinone biosynthesis methyltransferase protein 1698 62.43 0 1821372..1822220 + 282 86357367 - RHE_CH01737 - hypothetical protein 1699 61.17 0 1822493..1823074 + 193 86357368 - RHE_CH01738 - hypothetical protein 1700 55.56 -1 1823189..1823503 + 104 86357369 - RHE_CH01739 - hypothetical protein 1701 63.05 0 1823567..1824451 + 294 86357370 - RHE_CH01740 - hypothetical protein 1702 62.44 0 1824551..1825543 + 330 86357371 - RHE_CH01741 - hypothetical protein 1703 58.33 -1 1825589..1826380 - 263 86357372 phhA RHE_CH01742 - phenylalanine 4-monooxygenase 1704 58.87 0 1826503..1826964 + 153 86357373 - RHE_CH01743 - AsnC family transcriptional regulator 1705 58.88 0 1826968..1827468 - 166 86357374 - RHE_CH01744 - AsnC family transcriptional regulator 1706 57.66 -1 1827599..1828708 + 369 86357375 - RHE_CH01745 - 4-hydroxyphenylpyruvate dioxygenase protein 1707 60.65 0 1828748..1830109 + 453 86357376 hmgA RHE_CH01746 - homogentisate 1,2-dioxygenase 1708 64.13 0 1830148..1831173 + 341 86357377 - RHE_CH01747 - fumarylacetoacetate hydrolase 1709 59.40 0 1831170..1831802 + 210 86357378 maiA RHE_CH01748 - maleylacetoacetate isomerase protein 1710 60.51 0 1831806..1832276 - 156 86357379 - RHE_CH01749 - hypothetical protein 1711 60.66 0 1832693..1833958 + 421 86357380 - RHE_CH01750 - hypothetical protein 1712 62.61 0 1833850..1834194 - 114 86357381 - RHE_CH01751 - hypothetical protein 1713 63.39 0 1834204..1834722 - 172 86357382 - RHE_CH01752 - putative phosphohistidine phosphatase protein 1714 62.08 0 1835177..1838992 - 1271 86357383 nrd RHE_CH01753 - ribonucleotide-diphosphate reductase subunit alpha 1715 61.01 0 1839612..1840106 - 164 86357384 gpt RHE_CH01754 - xanthine-guanine phosphoribosyltransferase 1716 61.17 0 1840285..1841121 - 278 86357385 - RHE_CH01755 - putative universal stress protein 1717 62.68 0 1841212..1841988 - 258 86357386 cinA1 RHE_CH01756 - competence-damage associated protein (nucleotide-utilizing enzyme related tomolybdopterin-biosynthesis enzyme MoeA) 1718 53.75 -2 1842414..1844411 + 665 86357387 - RHE_CH01757 - hypothetical protein 1719 59.24 0 1845400..1845924 - 174 86357388 - RHE_CH01758 - hypothetical protein 1720 62.14 0 1845997..1847211 + 404 86357389 ilvA RHE_CH01759 - threonine dehydratase 1721 58.72 0 1847249..1847575 + 108 86357390 - RHE_CH01760 - hypothetical protein 1722 61.02 0 1847811..1849067 + 418 86357391 - RHE_CH01761 - putative sensory box/GGDEF family protein 1723 64.35 0 1849092..1849868 - 258 86357392 - RHE_CH01762 - oxidoreductase protein 1724 62.85 0 1849974..1850549 + 191 86357393 - RHE_CH01763 - TetR family transcriptional regulator 1725 62.44 0 1850596..1851210 - 204 86357394 acpD RHE_CH01764 - [acyl-carrier-protein] phosphodiesterase protein 1726 62.02 0 1851350..1852318 + 322 86357395 - RHE_CH01765 - LysR family transcriptional regulator 1727 60.23 0 1852357..1854345 - 662 86357396 cpdB RHE_CH01766 - bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 1728 60.25 0 1854626..1855030 - 134 86357397 - RHE_CH01767 - hypothetical protein 1729 61.06 0 1855175..1856083 - 302 86357398 - RHE_CH01768 - hypothetical protein 1730 57.36 -1 1856155..1856616 - 153 86357399 aldR RHE_CH01769 - AsnC family leucine-responsive regulatory protein 1731 64.25 0 1856773..1857891 + 372 86357400 aldA RHE_CH01770 - alanine dehydrogenase protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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