version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1590 63.60 0 1706286..1706969 + 227 86357259 - RHE_CH01625 - lipoprotein ABC transporter, ATP-binding protein 1591 55.37 -1 1706980..1707864 - 294 86357260 - RHE_CH01626 - hypothetical protein 1592 60.92 0 1707959..1711456 + 1165 86357261 dnaE RHE_CH01627 - DNA polymerase III subunit alpha 1593 62.48 0 1711547..1712836 - 429 86357262 - RHE_CH01628 - hypothetical protein 1594 63.26 0 1713032..1714324 - 430 86357263 dinP RHE_CH01629 - DNA polymerase IV 1595 66.88 +1 1714523..1714987 + 154 86357264 - RHE_CH01630 - putative acetyltransferase protein 1596 61.58 0 1714962..1715630 - 222 86357265 - RHE_CH01631 - hypothetical protein 1597 56.18 -1 1716074..1716445 + 123 86357266 celR1 RHE_CH01632 - two-component response regulator protein 1598 62.81 0 1716464..1717837 + 457 86357267 pleD RHE_CH01633 - response regulator PleD 1599 48.21 -2 1718586..1718753 - 55 86357268 rpmG RHE_CH01634 - 50S ribosomal protein L33 1600 59.83 0 1718846..1720030 - 394 86357269 - RHE_CH01635 - ABC transporter permease 1601 65.13 +1 1720281..1720736 - 151 86357270 - RHE_CH01636 - hypothetical protein 1602 63.92 0 1720806..1723175 - 789 86357271 rnr RHE_CH01637 - exoribonuclease protein 1603 62.67 0 1723177..1725831 - 884 86357272 topA RHE_CH01638 - DNA topoisomerase I 1604 68.50 +2 1726075..1727217 - 380 86357273 - RHE_CH01639 - DNA processing chain A protein 1605 62.00 0 1727217..1727837 - 206 86357274 - RHE_CH01640 - putative glycerol-3-phosphate acyltransferase PlsY 1606 64.65 0 1727884..1729173 - 429 86357275 - RHE_CH01641 - dihydroorotase 1607 63.01 0 1729170..1730126 - 318 86357276 pyrB RHE_CH01642 - aspartate carbamoyltransferase catalytic subunit 1608 64.14 0 1730305..1731963 + 552 86357277 aidB RHE_CH01643 - acyl-CoA dehydrogenase protein 1609 55.17 -2 1731975..1732487 - 170 86357278 - RHE_CH01644 - hypothetical protein 1610 62.82 0 1732716..1735601 - 961 86357279 rne RHE_CH01645 - ribonuclease E protein 1611 63.12 0 1736299..1737483 + 394 86357280 amiC RHE_CH01646 - n-acetylmuramoyl-l-alanine amidase protein 1612 62.64 0 1737845..1740304 + 819 86357281 mrcA RHE_CH01647 - penicillin binding peptidoglycan synthetase protein 1613 62.33 0 1740569..1741537 + 322 86357282 prfB RHE_CH01648 - peptide chain release factor 2 1614 62.65 0 1741589..1742608 - 339 86357283 - RHE_CH01649 - hypothetical protein 1615 60.52 0 1742641..1743144 - 167 86357284 - RHE_CH01650 - hypothetical protein 1616 61.50 0 1743149..1743922 - 257 86357285 ppnK RHE_CH01651 - inorganic polyphosphate/ATP-NAD kinase 1617 64.90 +1 1744357..1744695 + 112 86357286 - RHE_CH01653 - hypothetical protein 1618 61.90 0 1745212..1745904 - 230 86357287 - RHE_CH01654 - putative metalloprotease inhibitor (transcriptional regulator) protein 1619 63.52 0 1745952..1746842 - 296 86357288 - RHE_CH01655 - tRNA/rRNA methyltransferase protein 1620 61.48 0 1747562..1748737 + 391 86357289 tufB RHE_CH01658 - elongation factor Tu 1621 56.94 -1 1749248..1750141 + 297 86357290 - RHE_CH01659 - p nucleoside-diphosphate-sugar epimerase protein 1622 56.72 -1 1750576..1750776 + 66 86357291 secE RHE_CH01661 - preprotein translocase subunit SecE 1623 58.00 -1 1750794..1751324 + 176 86357292 nusG RHE_CH01662 - transcription antitermination protein NusG 1624 57.18 -1 1751502..1751933 + 143 86357293 rplK RHE_CH01663 - 50S ribosomal protein L11 1625 63.53 0 1751938..1752639 + 233 86357294 rplA RHE_CH01664 - 50S ribosomal protein L1 1626 58.19 -1 1752970..1753488 + 172 86357295 rplJ RHE_CH01665 - 50S ribosomal protein L10 1627 58.59 0 1753545..1753928 + 127 86357296 rplL RHE_CH01666 - 50S ribosomal protein L7/L12 1628 61.40 0 1754187..1758326 + 1379 86357297 rpoB RHE_CH01667 - DNA-directed RNA polymerase subunit beta 1629 61.13 0 1758516..1762724 + 1402 86357298 rpoC RHE_CH01668 - DNA-directed RNA polymerase subunit beta' 1630 59.86 0 1762825..1763118 - 97 86357299 - RHE_CH01669 - hypothetical protein 1631 59.14 0 1763615..1763986 + 123 86357300 rpsL RHE_CH01670 - 30S ribosomal protein S12 1632 59.66 0 1764065..1764535 + 156 86357301 rpsG RHE_CH01671 - 30S ribosomal protein S7 1633 59.43 0 1764565..1766664 + 699 86357302 fusA2 RHE_CH01672 - elongation factor G 1634 61.49 0 1766733..1767911 + 392 86357303 tufA RHE_CH01673 - elongation factor Tu 1635 60.84 0 1768218..1768526 + 102 86357304 rpsJ RHE_CH01674 - 30S ribosomal protein S10 1636 61.06 0 1768560..1769201 + 213 86357305 rplC RHE_CH01675 - 50S ribosomal protein L3 1637 61.19 0 1769215..1769835 + 206 86357306 rplD RHE_CH01676 - 50S ribosomal protein L4 1638 56.80 -1 1769832..1770125 + 97 86357307 rplW RHE_CH01677 - 50S ribosomal protein L23 1639 62.13 0 1770137..1770973 + 278 86357308 rplB RHE_CH01678 - 50S ribosomal protein L2 1640 55.20 -2 1770989..1771267 + 92 86357309 rpsS RHE_CH01679 - 30S ribosomal protein S19 1641 64.62 0 1771270..1771659 + 129 86357310 rplV RHE_CH01680 - 50S ribosomal protein L22 1642 62.45 0 1771659..1772393 + 244 86357311 rpsC RHE_CH01681 - 30S ribosomal protein S3 1643 61.11 0 1772432..1772845 + 137 86357312 rplP RHE_CH01682 - 50S ribosomal protein L16 1644 58.21 -1 1772857..1773057 + 66 86357313 rpmC RHE_CH01683 - 50S ribosomal protein L29 1645 56.67 -1 1773070..1773309 + 79 86357314 rpsQ RHE_CH01684 - 30S ribosomal protein S17 1646 58.27 -1 1773569..1773937 + 122 86357315 rplN RHE_CH01685 - 50S ribosomal protein L14 1647 59.55 0 1773950..1774258 + 102 86357316 rplX RHE_CH01686 - 50S ribosomal protein L24 1648 58.96 0 1774251..1774808 + 185 86357317 rplE RHE_CH01687 - 50S ribosomal protein L5 1649 59.80 0 1774841..1775146 + 101 86357318 rpsN RHE_CH01688 - 30S ribosomal protein S14 1650 58.90 0 1775159..1775557 + 132 86357319 rpsH RHE_CH01689 - 30S ribosomal protein S8 1651 58.61 0 1775600..1776133 + 177 86357320 rplF RHE_CH01690 - 50S ribosomal protein L6 1652 64.19 0 1776146..1776508 + 120 86357321 rplR RHE_CH01691 - 50S ribosomal protein L18 1653 63.33 0 1776643..1777212 + 189 86357322 rpsE RHE_CH01692 - 30S ribosomal protein S5 1654 59.05 0 1777226..1777435 + 69 86357323 rpmD RHE_CH01693 - 50S ribosomal protein L30 1655 62.47 0 1777452..1777928 + 158 86357324 rplO RHE_CH01694 - 50S ribosomal protein L15 1656 59.88 0 1778162..1779502 + 446 86357325 secY RHE_CH01695 - preprotein translocase subunit SecY 1657 60.68 0 1779499..1780149 + 216 86357326 adk RHE_CH01696 - adenylate kinase (ATP-AMP transphosphorylase) protein 1658 60.70 0 1780372..1780740 + 122 86357327 rpsM RHE_CH01697 - 30S ribosomal protein S13 1659 62.82 0 1780874..1781263 + 129 86357328 rpsK RHE_CH01698 - 30S ribosomal protein S11 1660 58.36 -1 1781361..1782371 + 336 86357329 rpoA RHE_CH01699 - DNA-directed RNA polymerase subunit alpha 1661 65.72 +1 1782494..1782916 + 140 86357330 rplQ RHE_CH01700 - 50S ribosomal protein L17 1662 60.00 0 1783066..1783470 + 134 86357331 - RHE_CH01701 - hypothetical protein 1663 58.60 0 1783489..1784145 - 218 86357332 - RHE_CH01702 - putative sulfite oxidase subunit YedZ 1664 63.08 0 1784145..1785092 - 315 86357333 - RHE_CH01703 - putative sulfite oxidase subunit YedY 1665 64.22 0 1785432..1787270 + 612 86357334 ilvDch1 RHE_CH01704 - dihydroxy-acid dehydratase 1666 60.34 0 1787330..1787677 - 115 86357335 - RHE_CH01705 - hypothetical protein 1667 60.10 0 1787700..1788080 - 126 86357336 - RHE_CH01706 - hypothetical protein 1668 62.34 0 1788325..1789617 + 430 86357337 degPch3 RHE_CH01707 - serine protease DO-like protein 1669 63.55 0 1789614..1790930 + 438 86357338 - RHE_CH01708 - recombination factor protein RarA 1670 57.05 -1 1790943..1791254 - 103 86357339 - RHE_CH01709 - hypothetical protein 1671 61.76 0 1791706..1792704 - 332 86357340 - RHE_CH01710 - 2-dehydropantoate 2-reductase 1672 62.91 0 1792860..1793711 - 283 86357341 - RHE_CH01711 - dehydrogenase protein 1673 61.37 0 1793825..1794712 + 295 86357342 - RHE_CH01712 - LysR family transcriptional regulator 1674 60.99 0 1794723..1795286 - 187 86357343 - RHE_CH01713 - putative nucleoside 2-deoxyribosyltransferase protein 1675 62.74 0 1795568..1796611 + 347 86357344 - RHE_CH01714 - putative esterase/lipase/thioesterase family protein 1676 62.18 0 1796638..1797261 - 207 86357345 - RHE_CH01715 - hypothetical protein 1677 55.73 -1 1797408..1797782 - 124 86357346 - RHE_CH01716 - putative two-component sensor histidine kinase protein 1678 60.32 0 1797775..1798515 - 246 86357347 - RHE_CH01717 - putative two-component sensor histidine kinase protein 1679 59.45 0 1798617..1798907 - 96 86357348 - RHE_CH01718 - hypothetical protein 1680 64.30 0 1799309..1800364 + 351 86357349 - RHE_CH01719 - LacI family transcription regulator 1681 61.04 0 1800366..1802000 + 544 86357350 - RHE_CH01720 - acyl-CoA transferase protein 1682 65.13 +1 1801993..1802772 + 259 86357351 - RHE_CH01721 - enoyl-CoA hydratase protein 1683 64.10 0 1802772..1804292 + 506 86357352 - RHE_CH01722 - NADP-dependent L-sorbosone dehydrogenase protein 1684 62.47 0 1804381..1805643 + 420 86357353 - RHE_CH01723 - sugar ABC transporter, substrate-binding protein 1685 61.53 0 1805756..1806709 + 317 86357354 - RHE_CH01724 - sugar ABC transporter, permease protein 1686 61.63 0 1806706..1807677 + 323 86357355 - RHE_CH01725 - sugar ABC transporter, permease protein 1687 66.04 +1 1807681..1808796 + 371 86357356 - RHE_CH01726 - sugar ABC transporter, ATP-binding protein 1688 61.14 0 1808812..1810350 + 512 86357357 - RHE_CH01727 - dehydrogenase protein 1689 63.12 0 1810492..1812015 + 507 86357358 - RHE_CH01728 - FAD-dependent L-sorbose dehydrogenase protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0