version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1515 63.38 0 1626257..1626925 + 222 86357184 - RHE_CH01546 - putative 2-deoxyglucose-6-phosphate phosphatase protein 1516 62.37 0 1627275..1627670 + 131 86357185 - RHE_CH01548 - hypothetical protein 1517 56.56 -1 1628023..1628655 - 210 86357186 - RHE_CH01549 - 3-demethylubiquinone-9 3-methyltransferase protein 1518 59.24 0 1629316..1629948 + 210 86357187 - RHE_CH01550 - hypothetical protein 1519 62.59 0 1629993..1630286 - 97 86357188 - RHE_CH01551 - hypothetical protein 1520 61.34 0 1630357..1631538 - 393 86357189 - RHE_CH01552 - ROK family transcriptional regulator 1521 61.38 0 1631898..1633655 + 585 86357190 - RHE_CH01553 - hypothetical protein 1522 60.81 0 1633676..1634290 - 204 86357191 - RHE_CH01554 - acetyltransferase protein 1523 57.70 -1 1634467..1635804 + 445 86357192 - RHE_CH01555 - sugar ABC transporter, substrate-binding protein 1524 55.03 -2 1635930..1636823 + 297 86357193 - RHE_CH01556 - sugar ABC transporter, permease protein 1525 57.07 -1 1636823..1637656 + 277 86357194 - RHE_CH01557 - sugar ABC transporter, permease protein 1526 61.53 0 1637673..1638917 - 414 86357195 - RHE_CH01558 - hypothetical protein 1527 61.61 0 1638914..1640476 - 520 86357196 - RHE_CH01559 - glycosyltransferase 1528 61.05 0 1640522..1641697 - 391 86357197 - RHE_CH01560 - glycosyltransferase 1529 61.46 0 1641701..1642276 - 191 86357198 - RHE_CH01561 - polysaccharide export system protein 1530 62.94 0 1642466..1644640 + 724 86357199 - RHE_CH01562 - polysaccharide transporter 1531 59.30 0 1644704..1645843 - 379 86357200 - RHE_CH01563 - hypothetical protein 1532 61.43 0 1646063..1646272 - 69 86357201 - RHE_CH01564 - hypothetical protein 1533 62.86 0 1646387..1647490 + 367 86357202 - RHE_CH01565 - cytochrome-c oxidase protein 1534 65.40 +1 1647513..1648304 - 263 86357203 - RHE_CH01566 - hypothetical protein 1535 62.81 0 1648309..1649241 - 310 86357204 argC RHE_CH01567 - N-acetyl-gamma-glutamyl-phosphate reductase 1536 63.27 0 1649303..1650331 - 342 86357205 speB1 RHE_CH01568 - agmatinase 1537 61.80 0 1650500..1651690 - 396 86357206 floR RHE_CH01569 - florfenicol/chloramphenicol resistance transporter protein 1538 65.17 +1 1651993..1652460 - 155 86357207 rpsI RHE_CH01570 - 30S ribosomal protein S9 1539 60.22 0 1652463..1652927 - 154 86357208 rplM RHE_CH01571 - 50S ribosomal protein L13 1540 64.11 0 1653220..1654119 - 299 86357209 - RHE_CH01572 - LysR family transcriptional regulator 1541 60.14 0 1654503..1655330 + 275 86357210 - RHE_CH01573 - enoyl-CoA hydratase 1542 61.18 0 1655331..1656260 - 309 86357211 - RHE_CH01574 - putative transporter, permease protein 1543 43.30 -2 1656255..1656575 + 106 86357212 - RHE_CH01575 - hypothetical protein 1544 63.17 0 1657074..1657502 + 142 86357213 - RHE_CH01576 - hypothetical protein 1545 62.38 0 1657620..1658903 + 427 86357214 - RHE_CH01577 - O-acetylhomoserine aminocarboxypropyltransferase 1546 58.44 0 1659686..1659928 - 80 86357215 - RHE_CH01578 - hypothetical protein 1547 53.85 -2 1660562..1660756 + 64 86357216 - RHE_CH01579 - hypothetical protein 1548 57.31 -1 1661428..1662015 + 195 86357217 - RHE_CH01580 - hypothetical protein 1549 56.08 -1 1662108..1662485 + 125 86357218 - RHE_CH01581 - putative glyoxalase protein 1550 62.18 0 1662765..1663076 + 103 86357219 - RHE_CH01582 - hypothetical protein 1551 57.89 -1 1663264..1663605 + 113 86357220 - RHE_CH01583 - hypothetical protein 1552 59.33 0 1663823..1665949 + 708 86357221 - RHE_CH01584 - putative sensory box/GGDEF family protein 1553 62.73 0 1666011..1667255 - 414 86357222 - RHE_CH01585 - cytochrome P450 hydroxylase protein 1554 63.77 0 1667408..1668754 - 448 86357223 - RHE_CH01586 - putative sensory box/GGDEF family protein 1555 60.63 0 1669050..1669679 + 209 86357224 clpP RHE_CH01587 - ATP-dependent Clp protease proteolytic subunit 1556 60.80 0 1669980..1671257 + 425 86357225 clpX RHE_CH01588 - ATP-dependent protease ATP-binding subunit 1557 60.46 0 1671670..1674087 + 805 86357226 lon RHE_CH01589 - ATP-dependent protease LA protein 1558 60.51 0 1674294..1674569 + 91 86357227 hrm RHE_CH01590 - nucleoid DNA-binding protein 1559 64.08 0 1674987..1675682 + 231 86357228 - RHE_CH01591 - putative permease protein 1560 61.71 0 1675924..1678122 + 732 86357229 - RHE_CH01592 - putative alkaline phosphatase protein 1561 63.73 0 1678232..1679218 - 328 86357230 - RHE_CH01593 - oxidoreductase protein 1562 62.09 0 1679307..1679765 + 152 86357231 - RHE_CH01594 - hypothetical protein 1563 59.69 0 1679771..1680487 - 238 86357232 - RHE_CH01595 - hypothetical protein 1564 60.88 0 1680542..1680904 + 120 86357233 - RHE_CH01596 - hypothetical protein 1565 60.11 0 1681033..1681581 + 182 86357234 btuE RHE_CH01597 - glutathione peroxidase protein 1566 57.59 -1 1681879..1682418 - 179 86357235 - RHE_CH01598 - hypothetical protein 1567 54.64 -2 1683077..1683442 + 121 86357236 nuoA1 RHE_CH01602 - NADH dehydrogenase subunit A 1568 63.08 0 1683433..1684017 + 194 86357237 nuoB1 RHE_CH01603 - NADH dehydrogenase subunit B 1569 61.03 0 1684036..1684638 + 200 86357238 nuoC1 RHE_CH01604 - NADH dehydrogenase subunit C 1570 53.57 -2 1684736..1685071 + 111 86357239 - RHE_CH01605 - hypothetical protein 1571 60.29 0 1685131..1686321 + 396 86357240 nuoD1 RHE_CH01606 - NADH dehydrogenase subunit D 1572 59.71 0 1686321..1686593 + 90 86357241 - RHE_CH01607 - hypothetical protein 1573 63.73 0 1686610..1687767 + 385 86357242 nuoE1 RHE_CH01608 - NADH dehydrogenase subunit E 1574 62.99 0 1687778..1689082 + 434 86357243 nuoF1 RHE_CH01609 - NADH dehydrogenase I subunit F 1575 65.10 +1 1689085..1689786 + 233 86357244 - RHE_CH01610 - hypothetical protein 1576 63.40 0 1690010..1692091 + 693 86357245 nuoG1 RHE_CH01611 - NADH dehydrogenase subunit G 1577 59.67 0 1692104..1693147 + 347 86357246 nuoH1 RHE_CH01612 - NADH dehydrogenase subunit H 1578 59.55 0 1693188..1693679 + 163 86357247 nuoI RHE_CH01613 - NADH dehydrogenase subunit I 1579 59.51 0 1693821..1694435 + 204 86357248 nuoJ RHE_CH01614 - NADH dehydrogenase subunit J 1580 55.66 -1 1694459..1694767 + 102 86357249 nuoK1 RHE_CH01615 - NADH dehydrogenase subunit K 1581 61.02 0 1694775..1696775 + 666 86357250 nuoL RHE_CH01616 - NADH dehydrogenase subunit L 1582 59.92 0 1696775..1698286 + 503 86357251 nuoM1 RHE_CH01617 - NADH dehydrogenase subunit M 1583 61.48 0 1698305..1699750 + 481 86357252 nuoN1 RHE_CH01618 - NADH dehydrogenase subunit N 1584 63.79 0 1699750..1700514 + 254 86357253 birA RHE_CH01619 - biotin--[acetyl-CoA carboxylase] synthetase protein 1585 62.45 0 1700589..1702202 + 537 86357254 - RHE_CH01620 - putative metallo-beta-lactamase family protein 1586 63.95 0 1702205..1702609 + 134 86357255 - RHE_CH01621 - putative lactoylglutathione lyase protein 1587 59.06 0 1702700..1703041 + 113 86357256 - RHE_CH01622 - hypothetical protein 1588 59.86 0 1703629..1704951 + 440 162329642 proS RHE_CH01623 - prolyl-tRNA synthetase 1589 61.61 0 1705126..1706271 + 381 86357258 - RHE_CH01624 - lipoprotein ABC transporter, permease protein 1590 63.60 0 1706286..1706969 + 227 86357259 - RHE_CH01625 - lipoprotein ABC transporter, ATP-binding protein 1591 55.37 -1 1706980..1707864 - 294 86357260 - RHE_CH01626 - hypothetical protein 1592 60.92 0 1707959..1711456 + 1165 86357261 dnaE RHE_CH01627 - DNA polymerase III subunit alpha 1593 62.48 0 1711547..1712836 - 429 86357262 - RHE_CH01628 - hypothetical protein 1594 63.26 0 1713032..1714324 - 430 86357263 dinP RHE_CH01629 - DNA polymerase IV 1595 66.88 +1 1714523..1714987 + 154 86357264 - RHE_CH01630 - putative acetyltransferase protein 1596 61.58 0 1714962..1715630 - 222 86357265 - RHE_CH01631 - hypothetical protein 1597 56.18 -1 1716074..1716445 + 123 86357266 celR1 RHE_CH01632 - two-component response regulator protein 1598 62.81 0 1716464..1717837 + 457 86357267 pleD RHE_CH01633 - response regulator PleD 1599 48.21 -2 1718586..1718753 - 55 86357268 rpmG RHE_CH01634 - 50S ribosomal protein L33 1600 59.83 0 1718846..1720030 - 394 86357269 - RHE_CH01635 - ABC transporter permease 1601 65.13 +1 1720281..1720736 - 151 86357270 - RHE_CH01636 - hypothetical protein 1602 63.92 0 1720806..1723175 - 789 86357271 rnr RHE_CH01637 - exoribonuclease protein 1603 62.67 0 1723177..1725831 - 884 86357272 topA RHE_CH01638 - DNA topoisomerase I 1604 68.50 +2 1726075..1727217 - 380 86357273 - RHE_CH01639 - DNA processing chain A protein 1605 62.00 0 1727217..1727837 - 206 86357274 - RHE_CH01640 - putative glycerol-3-phosphate acyltransferase PlsY 1606 64.65 0 1727884..1729173 - 429 86357275 - RHE_CH01641 - dihydroorotase 1607 63.01 0 1729170..1730126 - 318 86357276 pyrB RHE_CH01642 - aspartate carbamoyltransferase catalytic subunit 1608 64.14 0 1730305..1731963 + 552 86357277 aidB RHE_CH01643 - acyl-CoA dehydrogenase protein 1609 55.17 -2 1731975..1732487 - 170 86357278 - RHE_CH01644 - hypothetical protein 1610 62.82 0 1732716..1735601 - 961 86357279 rne RHE_CH01645 - ribonuclease E protein 1611 63.12 0 1736299..1737483 + 394 86357280 amiC RHE_CH01646 - n-acetylmuramoyl-l-alanine amidase protein 1612 62.64 0 1737845..1740304 + 819 86357281 mrcA RHE_CH01647 - penicillin binding peptidoglycan synthetase protein 1613 62.33 0 1740569..1741537 + 322 86357282 prfB RHE_CH01648 - peptide chain release factor 2 1614 62.65 0 1741589..1742608 - 339 86357283 - RHE_CH01649 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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