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Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1445 64.72 0 1547734..1548195 - 153 86357114 moaE RHE_CH01476 - molybdopterin converting factor subunit 2 protein 1446 58.04 -1 1548454..1548708 - 84 86357115 moaD RHE_CH01477 - molybdopterin converting factor subunit 1 protein 1447 60.74 0 1548705..1549295 - 196 86357116 pgsAch RHE_CH01478 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase protein 1448 63.04 0 1549459..1551498 - 679 86357117 uvrC RHE_CH01479 - excinuclease ABC subunit C 1449 62.24 0 1551495..1552262 - 255 86357118 - RHE_CH01480 - short chain dehydrogenase 1450 60.69 0 1552627..1553262 + 211 86357119 ropB1 RHE_CH01481 - outer membrane protein 1451 58.79 0 1553346..1553942 - 198 86357120 gstch7 RHE_CH01482 - glutathione S-transferase protein 1452 62.30 0 1553999..1554868 - 289 86357121 - RHE_CH01483 - putative DNA methylase protein 1453 64.05 0 1554951..1557089 + 712 86357122 - RHE_CH01484 - anaerobic dehydrogenase protein 1454 59.39 0 1557086..1557676 + 196 86357123 - RHE_CH01485 - putative ADP-ribose pyrophosphatase protein 1455 64.96 +1 1557821..1558990 + 389 86357124 phnM2 RHE_CH01486 - phosphonate metabolism protein 1456 65.92 +1 1558987..1559658 - 223 162329645 purN RHE_CH01487 - phosphoribosylglycinamide formyltransferase 1457 65.55 +1 1559655..1560728 - 357 86357126 purM RHE_CH01488 - phosphoribosylaminoimidazole synthetase 1458 59.56 0 1560972..1562096 + 374 86357127 - RHE_CH01489 - putative permease protein 1459 62.18 0 1562089..1562802 + 237 86357128 - RHE_CH01490 - hypothetical protein 1460 60.54 0 1562867..1565071 + 734 86357129 ppk RHE_CH01491 - polyphosphate kinase 1461 62.46 0 1565083..1566603 + 506 86357130 ppx2 RHE_CH01492 - exopolyphosphatase protein 1462 60.41 0 1566855..1568213 - 452 86357131 - RHE_CH01493 - hypothetical protein 1463 61.30 0 1568320..1569381 - 353 86357132 cyaB RHE_CH01494 - adenylate cyclase protein 1464 62.04 0 1569461..1570606 - 381 86357133 rnd2 RHE_CH01495 - RNase D protein 1465 64.08 0 1570736..1572127 - 463 86357134 - RHE_CH01496 - metallo-oxidoreductase protein 1466 61.97 0 1572365..1574173 + 602 86357135 aspS RHE_CH01497 - aspartyl-tRNA synthetase 1467 59.60 0 1574315..1575502 - 395 86357136 - RHE_CH01498 - hypothetical protein 1468 61.26 0 1575738..1577993 + 751 86357137 parC RHE_CH01499 - DNA topoisomerase IV subunit A 1469 61.48 0 1578105..1578779 - 224 86357138 - RHE_CH01500 - hypothetical protein 1470 61.52 0 1578952..1579767 - 271 86357139 - RHE_CH01501 - putative permease protein 1471 60.36 0 1579840..1580616 - 258 162329644 ate RHE_CH01502 - arginyl-tRNA-protein transferase 1472 61.87 0 1580798..1581256 - 152 86357141 - RHE_CH01503 - hypothetical protein 1473 62.33 0 1581331..1582344 - 337 86357142 hemB RHE_CH01504 - delta-aminolevulinic acid dehydratase 1474 60.19 0 1582390..1582914 + 174 86357143 - RHE_CH01505 - hypothetical protein 1475 58.33 -1 1583044..1583559 + 171 86357144 - RHE_CH01506 - MarR family transcriptional regulator 1476 62.21 0 1583995..1585296 + 433 86357145 - RHE_CH01507 - putative peptidoglycan binding protein (involved in cell wall degradation) 1477 61.51 0 1585515..1586813 + 432 86357146 glyA RHE_CH01508 - serine hydroxymethyltransferase 1478 61.64 0 1586823..1587299 + 158 86357147 - RHE_CH01509 - transcriptional regulator NrdR 1479 64.98 +1 1587303..1588610 + 435 86357148 ribD RHE_CH01510 - 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidinedeaminase protein 1480 62.25 0 1588610..1589221 + 203 86357149 ribE RHE_CH01511 - riboflavin synthase subunit alpha 1481 59.43 0 1589340..1590209 - 289 86357150 - RHE_CH01512 - glucose-1-phosphate thymidylyltransferase protein 1482 62.61 0 1590219..1591106 - 295 86357151 rfbD RHE_CH01513 - dTDP-4-dehydrorhamnose reductase protein 1483 59.85 0 1591110..1592165 - 351 86357152 rffB RHE_CH01514 - dTDP-glucose-4,6-dehydratase protein 1484 59.07 0 1592172..1592750 - 192 86357153 - RHE_CH01515 - dTDP-rhamnose-3,5-epimerase protein 1485 60.50 0 1592740..1594587 - 615 86357154 - RHE_CH01516 - hypothetical protein 1486 56.42 -1 1594870..1596030 + 386 86357155 - RHE_CH01517 - putative nucleotide sugar transaminase protein 1487 59.26 0 1596248..1597462 - 404 86357156 - RHE_CH01518 - putative oxidoreductase protein 1488 58.12 -1 1597459..1598652 - 397 86357157 - RHE_CH01519 - putative carbamoyl-phosphate-synthetase protein 1489 55.58 -1 1598817..1601189 - 790 86357158 - RHE_CH01520 - putative beta-D-1,6 glucosyltransferase protein 1490 54.74 -2 1601297..1602193 - 298 86357159 - RHE_CH01521 - putative glucosyltransferase protein 1491 62.21 0 1602486..1603001 - 171 86357160 - RHE_CH01522 - putative acetyltransferase protein 1492 61.31 0 1603026..1603529 - 167 86357161 - RHE_CH01523 - hypothetical protein 1493 63.33 0 1603707..1604066 - 119 86357162 - RHE_CH01524 - hypothetical protein 1494 60.09 0 1604413..1604868 + 151 86357163 ribH RHE_CH01525 - riboflavin synthase subunit beta 1495 62.32 0 1604872..1605354 + 160 86357164 nusB RHE_CH01526 - transcription antitermination protein NusB 1496 64.24 0 1605551..1607689 + 712 86357165 hppA RHE_CH01527 - membrane-bound proton-translocating pyrophosphatase 1497 61.68 0 1607987..1608487 - 166 86357166 - RHE_CH01528 - hypothetical protein 1498 60.22 0 1608849..1609298 + 149 86357167 - RHE_CH01529 - hypothetical protein 1499 61.08 0 1609310..1609864 + 184 86357168 - RHE_CH01530 - hypothetical protein 1500 59.73 0 1609988..1611010 + 340 86357169 plsX RHE_CH01531 - putative glycerol-3-phosphate acyltransferase PlsX 1501 63.17 0 1611031..1612002 + 323 162329643 fabH RHE_CH01532 - 3-oxoacyl-(acyl carrier protein) synthase III 1502 59.00 0 1612109..1612447 + 112 86357171 ihfA RHE_CH01533 - integration host factor subunit alpha 1503 62.06 0 1612598..1613140 + 180 86357172 - RHE_CH01534 - MerR family transcriptional regulator 1504 62.93 0 1613145..1613492 - 115 86357173 - RHE_CH01535 - putative two-component response regulator protein 1505 60.11 0 1613764..1615410 + 548 86357174 - RHE_CH01536 - putative two-component sensor histidine kinase protein 1506 61.27 0 1615447..1615761 - 104 86357175 - RHE_CH01537 - hypothetical protein 1507 62.61 0 1615933..1616697 + 254 86357176 - RHE_CH01538 - hypothetical protein 1508 58.89 0 1616732..1617091 + 119 86357177 - RHE_CH01539 - insertion sequence transposase protein, ISRM11/ISRM2011-2 element 1509 60.00 0 1617201..1617680 + 159 86357178 - RHE_CH01540 - insertion sequence transposase protein, ISRM11/ISRM2011-2 element 1510 72.22 +2 1617845..1618150 - 101 86357179 - RHE_CH01541 - hypothetical protein 1511 60.35 0 1618113..1620359 + 748 86357180 celA RHE_CH01542 - cellulose synthase protein 1512 63.91 0 1620356..1622788 + 810 86357181 celB RHE_CH01543 - cellulose synthase protein 1513 61.60 0 1622785..1623831 + 348 86357182 celC RHE_CH01544 - endoglucanase (glycoside hydrolase) protein 1514 66.17 +1 1623960..1626179 + 739 86357183 - RHE_CH01545 - hypothetical protein 1515 63.38 0 1626257..1626925 + 222 86357184 - RHE_CH01546 - putative 2-deoxyglucose-6-phosphate phosphatase protein 1516 62.37 0 1627275..1627670 + 131 86357185 - RHE_CH01548 - hypothetical protein 1517 56.56 -1 1628023..1628655 - 210 86357186 - RHE_CH01549 - 3-demethylubiquinone-9 3-methyltransferase protein 1518 59.24 0 1629316..1629948 + 210 86357187 - RHE_CH01550 - hypothetical protein 1519 62.59 0 1629993..1630286 - 97 86357188 - RHE_CH01551 - hypothetical protein 1520 61.34 0 1630357..1631538 - 393 86357189 - RHE_CH01552 - ROK family transcriptional regulator 1521 61.38 0 1631898..1633655 + 585 86357190 - RHE_CH01553 - hypothetical protein 1522 60.81 0 1633676..1634290 - 204 86357191 - RHE_CH01554 - acetyltransferase protein 1523 57.70 -1 1634467..1635804 + 445 86357192 - RHE_CH01555 - sugar ABC transporter, substrate-binding protein 1524 55.03 -2 1635930..1636823 + 297 86357193 - RHE_CH01556 - sugar ABC transporter, permease protein 1525 57.07 -1 1636823..1637656 + 277 86357194 - RHE_CH01557 - sugar ABC transporter, permease protein 1526 61.53 0 1637673..1638917 - 414 86357195 - RHE_CH01558 - hypothetical protein 1527 61.61 0 1638914..1640476 - 520 86357196 - RHE_CH01559 - glycosyltransferase 1528 61.05 0 1640522..1641697 - 391 86357197 - RHE_CH01560 - glycosyltransferase 1529 61.46 0 1641701..1642276 - 191 86357198 - RHE_CH01561 - polysaccharide export system protein 1530 62.94 0 1642466..1644640 + 724 86357199 - RHE_CH01562 - polysaccharide transporter 1531 59.30 0 1644704..1645843 - 379 86357200 - RHE_CH01563 - hypothetical protein 1532 61.43 0 1646063..1646272 - 69 86357201 - RHE_CH01564 - hypothetical protein 1533 62.86 0 1646387..1647490 + 367 86357202 - RHE_CH01565 - cytochrome-c oxidase protein 1534 65.40 +1 1647513..1648304 - 263 86357203 - RHE_CH01566 - hypothetical protein 1535 62.81 0 1648309..1649241 - 310 86357204 argC RHE_CH01567 - N-acetyl-gamma-glutamyl-phosphate reductase 1536 63.27 0 1649303..1650331 - 342 86357205 speB1 RHE_CH01568 - agmatinase 1537 61.80 0 1650500..1651690 - 396 86357206 floR RHE_CH01569 - florfenicol/chloramphenicol resistance transporter protein 1538 65.17 +1 1651993..1652460 - 155 86357207 rpsI RHE_CH01570 - 30S ribosomal protein S9 1539 60.22 0 1652463..1652927 - 154 86357208 rplM RHE_CH01571 - 50S ribosomal protein L13 1540 64.11 0 1653220..1654119 - 299 86357209 - RHE_CH01572 - LysR family transcriptional regulator 1541 60.14 0 1654503..1655330 + 275 86357210 - RHE_CH01573 - enoyl-CoA hydratase 1542 61.18 0 1655331..1656260 - 309 86357211 - RHE_CH01574 - putative transporter, permease protein 1543 43.30 -2 1656255..1656575 + 106 86357212 - RHE_CH01575 - hypothetical protein 1544 63.17 0 1657074..1657502 + 142 86357213 - RHE_CH01576 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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