version 1.0
Rhizobium etli CFN 42, complete genome - 1..4381608 4035 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 76 59.57 0 91324..92211 + 295 86355745 - RHE_CH00084 - sugar ABC transporter, permease protein 77 62.01 0 92235..93308 + 357 86355746 - RHE_CH00085 - oxidoreductase protein 78 61.93 0 93339..94415 + 358 86355747 - RHE_CH00086 - sugar ABC transporter, ATP binding protein 79 60.62 0 94515..95390 + 291 86355748 - RHE_CH00087 - putative choline kinase protein 80 62.26 0 95391..97841 + 816 86355749 - RHE_CH00088 - glycine cleavage system T protein 81 64.61 0 98109..99566 - 485 86355750 uxuB RHE_CH00089 - D-mannonate oxidoreductase protein 82 63.56 0 99563..100978 - 471 86355751 uxaC RHE_CH00090 - glucuronate isomerase 83 57.14 -1 101158..101367 + 69 162329647 - RHE_CH00091 - hypothetical protein 84 64.78 0 101411..102895 - 494 86355753 gabDch RHE_CH00092 - succinate-semialdehyde dehydrogenase protein 85 63.31 0 102958..104238 - 426 86355754 gabT RHE_CH00093 - 4-aminobutyrate aminotransferase 86 65.56 +1 104403..105212 + 269 86355755 - RHE_CH00094 - MerR family transcriptional regulator 87 62.68 0 105297..105923 + 208 86355756 rnd1 RHE_CH00095 - RNAse D protein 88 64.49 0 106148..107665 + 505 86355757 - RHE_CH00096 - hypothetical protein 89 60.45 0 107742..109445 - 567 86355758 rpsA RHE_CH00097 - 30S ribosomal protein S1 90 61.65 0 109619..110395 - 258 86355759 cmk RHE_CH00098 - cytidylate kinase 91 57.03 -1 110650..111033 + 127 86355760 - RHE_CH00099 - hypothetical protein 92 61.18 0 111780..112016 - 78 86355761 - RHE_CH00101 - hypothetical protein 93 64.59 0 112252..112974 + 240 86355762 - RHE_CH00102 - hypothetical protein 94 61.22 0 113042..113830 + 262 86355763 - RHE_CH00103 - hypothetical protein 95 57.17 -1 113833..114306 - 157 86355764 - RHE_CH00104 - hypothetical protein 96 63.68 0 114422..115057 + 211 86355765 - RHE_CH00105 - hypothetical protein 97 63.10 0 115178..115597 - 139 86355766 irr RHE_CH00106 - iron transcriptional regulator protein 98 61.82 0 115899..116414 + 171 86355767 fabA RHE_CH00107 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 99 61.39 0 116460..117692 + 410 86355768 fabB RHE_CH00108 - 3-oxoacyl-(acyl carrier protein) synthase I 100 63.07 0 117697..118503 + 268 86355769 fabI1 RHE_CH00109 - enoyl-(acyl carrier protein) reductase 101 66.18 +1 118600..119616 - 338 86355770 - RHE_CH00110 - rRNA (guanine-N2-)-methyltransferase, small subunit protein 102 61.80 0 119692..121830 - 712 86355771 pnp RHE_CH00111 - polynucleotide phosphorylase/polyadenylase 103 55.56 -1 122180..122449 - 89 86355772 rpsO RHE_CH00112 - 30S ribosomal protein S15 104 59.27 0 122600..123451 - 283 86355773 - RHE_CH00113 - putative hydrolase protein 105 63.24 0 123530..124462 - 310 86355774 truB RHE_CH00114 - tRNA pseudouridine synthase B 106 59.85 0 124475..124885 - 136 86355775 rbfA RHE_CH00115 - ribosome-binding factor A 107 65.03 +1 125036..127786 - 916 86355776 infB RHE_CH00116 - translation initiation factor IF-2 108 62.75 0 127889..128578 - 229 86355777 - RHE_CH00117 - hypothetical protein 109 61.30 0 128578..130179 - 533 86355778 nusA RHE_CH00118 - transcription elongation factor NusA 110 57.79 -1 130240..130836 - 198 86355779 - RHE_CH00119 - hypothetical protein 111 64.55 0 131018..132721 + 567 86355780 - RHE_CH00120 - putative ABC transporter, permease protein 112 62.28 0 132730..133185 + 151 86355781 - RHE_CH00121 - acetyltransferase protein 113 61.99 0 133192..134430 - 412 86355782 - RHE_CH00122 - transglycosylase protein 114 64.36 0 134442..135047 - 201 86355783 recR RHE_CH00123 - recombination protein RecR 115 59.67 0 135066..135722 + 218 86355784 - RHE_CH00124 - hypothetical protein 116 62.96 0 135993..136316 - 107 86355785 - RHE_CH00125 - hypothetical protein 117 65.28 +1 136339..138213 - 624 86355786 dnaX RHE_CH00126 - DNA polymerase III subunits gamma and tau 118 59.85 0 138445..138855 + 136 86355787 - RHE_CH00127 - hypothetical protein 119 62.08 0 138852..139811 + 319 86355788 - RHE_CH00128 - MutT/NUDIX family NTP pyrophosphohydrolase 120 64.80 0 139816..140511 + 231 86355789 - RHE_CH00129 - transcriptional regulator protein 121 62.06 0 141037..141405 + 122 86355790 - RHE_CH00130 - putative glyoxalase protein 122 58.95 0 141425..142279 - 284 86355791 pheA RHE_CH00131 - prephenate dehydratase 123 62.30 0 142290..143045 - 251 86355792 kdsB1 RHE_CH00132 - 3-deoxy-manno-octulosonate cytidylyltransferase 124 61.17 0 143199..143762 + 187 86355793 cycM RHE_CH00133 - cytochrome-c protein 125 62.55 0 143699..145084 - 461 86355794 - RHE_CH00134 - sugar ABC transporter, permease protein 126 60.22 0 145313..146305 + 330 86355795 - RHE_CH00135 - sugar kinase protein 127 63.89 0 146298..146837 - 179 86355796 - RHE_CH00136 - hypothetical protein 128 63.64 0 146819..146917 - 32 86355797 - RHE_CH00137 - hypothetical protein 129 63.67 0 147023..148024 + 333 86355798 - RHE_CH00138 - D-2-hydroxyacid dehydrogenase protein 130 62.87 0 148056..148529 - 157 86355799 - RHE_CH00139 - acetyltransferase protein 131 64.19 0 148526..149293 - 255 86355800 moeB RHE_CH00140 - molybdopterin biosynthesis protein MoeB 132 65.07 +1 149341..150465 - 374 86355801 recF RHE_CH00141 - recombination protein F 133 56.56 -1 150848..151213 + 121 86355802 - RHE_CH00142 - Cro/CI family transcriptional regulator 134 58.67 0 151335..151709 - 124 86355803 - RHE_CH00143 - hypothetical protein 135 61.44 0 151875..153002 - 375 86355804 dnaJ1 RHE_CH00144 - DnaJ family molecular chaperone 136 61.29 0 153088..155004 - 638 86355805 dnaK RHE_CH00145 - molecular chaperone DnaK 137 64.01 0 155282..157612 - 776 86355806 - RHE_CH00146 - penicillin binding protein 138 60.96 0 158145..159038 - 297 86355807 - RHE_CH00147 - hypothetical protein 139 62.78 0 159233..160621 - 462 86355808 dapE1 RHE_CH00148 - hypothetical protein 140 62.31 0 160833..163220 + 795 86355809 - RHE_CH00149 - putative sensory box/GGDEF family protein 141 64.03 0 163227..163643 - 138 86355810 - RHE_CH00150 - MarR family transcriptional regulator 142 62.40 0 164051..167050 + 999 86355811 polA RHE_CH00151 - DNA polymerase I 143 63.45 0 167219..169546 + 775 86355812 ftsK1 RHE_CH00152 - cell division protein 144 56.41 -1 169580..170086 - 168 86355813 - RHE_CH00153 - hypothetical protein 145 66.13 +1 170096..170653 - 185 86355814 gmk1 RHE_CH00154 - guanylate kinase (GMP kinase) protein 146 63.42 0 170698..171837 - 379 86355815 phnM1 RHE_CH00155 - phosphonate metabolism protein 147 61.02 0 171850..172611 - 253 86355816 - RHE_CH00156 - hypothetical protein 148 61.76 0 172686..174029 - 447 86355817 - RHE_CH00157 - phosphonate ABC transporter permease 149 60.42 0 174037..174996 - 319 86355818 - RHE_CH00158 - phosphonate ABC transporter permease 150 61.15 0 175169..176074 - 301 86355819 - RHE_CH00159 - phosphonate ABC transporter substrate-binding protein 151 64.42 0 176162..177007 - 281 86355820 - RHE_CH00160 - phosphonate ABC transporter ATP-binding 152 62.94 0 177125..177742 - 205 86355821 - RHE_CH00161 - acetyltransferase protein 153 64.55 0 177739..178446 - 235 86355822 - RHE_CH00162 - phosphonate ABC transporter ATP-binding 154 64.09 0 178474..179250 - 258 86355823 phnK RHE_CH00163 - phosphonates transport ATP-binding protein 155 62.33 0 179247..180122 - 291 86355824 phnJ RHE_CH00164 - C-P (carbon-phosphorus) lyase component protein 156 65.49 +1 180119..181225 - 368 86355825 phnI RHE_CH00165 - C-P (carbon-phosphorus) lyase component protein 157 64.20 0 181230..181838 - 202 86355826 phnH RHE_CH00166 - carbon-phosphorus lyase complex subunit 158 67.30 +1 181838..182314 - 158 86355827 phnG RHE_CH00167 - C-P (carbon-phosphorus) lyase component protein 159 66.26 +1 182424..183161 + 245 86355828 - RHE_CH00168 - GntR family transcriptional regulator 160 62.89 0 183206..183841 - 211 86355829 gpmA RHE_CH00169 - phosphoglyceromutase 161 65.58 +1 183862..184686 - 274 86355830 dapB1 RHE_CH00170 - dihydrodipicolinate reductase 162 62.81 0 184702..186489 - 595 86355831 - RHE_CH00171 - multidrug ABC transporter ATP-binding protein 163 64.04 0 186614..187639 - 341 86355832 glk RHE_CH00172 - glucokinase 164 63.52 0 187657..188037 - 126 86355833 mgsA RHE_CH00173 - methylglyoxal synthase 165 66.57 +1 188124..189197 - 357 86355834 mepA RHE_CH00174 - penicillin-insensitive murein endopeptidase 166 57.12 -1 189438..191270 + 610 86355835 - RHE_CH00175 - peptide ABC transporter, substrate-binding protein 167 57.67 -1 191421..192509 + 362 86355836 - RHE_CH00176 - peptide ABC transporter, permease protein 168 60.92 0 192509..193657 + 382 86355837 - RHE_CH00177 - peptide ABC transporter, permease protein 169 62.86 0 193663..195291 + 542 86355838 - RHE_CH00178 - peptide ABC transporter, ATP binding protein 170 60.73 0 195300..196259 + 319 86355839 - RHE_CH00179 - hydroxyacid dehydrogenase protein 171 64.46 0 196401..196763 + 120 86355840 - RHE_CH00180 - hypothetical protein 172 61.00 0 196933..198237 + 434 86355841 pncB RHE_CH00181 - nicotinate phosphoribosyltransferase 173 58.70 0 198261..198737 + 158 86355842 - RHE_CH00182 - hypothetical protein 174 58.60 0 199152..199436 + 94 86355843 - RHE_CH00183 - hypothetical protein 175 61.49 0 199409..199756 - 115 86355844 - RHE_CH00184 - hypothetical protein 61.61 MEAN 3.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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