version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 844 60.32 -1 960560..960874 + 104 187926802 - Rpic_4635 - monooxygenase component MmoB/DmpM 845 66.77 0 960887..961876 + 329 187926803 - Rpic_4636 - methane/phenol/toluene hydroxylase 846 68.70 +1 961914..962945 + 343 187926804 - Rpic_4637 - Oxidoreductase FAD-binding domain protein 847 65.32 0 963199..964977 + 592 187926805 - Rpic_4638 - putative sigma54 specific transcriptional regulator 848 64.12 0 965041..966417 - 458 187926806 - Rpic_4639 - membrane protein involved in aromatic hydrocarbon degradation 849 67.14 0 966863..968557 + 564 187926807 - Rpic_4640 - putative sigma54 specific transcriptional regulator 850 66.67 0 968554..969303 + 249 187926808 - Rpic_4641 - transcriptional regulator, GntR family 851 66.85 0 969388..972048 - 886 187926809 - Rpic_4642 - formate dehydrogenase, alpha subunit 852 68.88 +1 972036..973478 - 480 187926810 - Rpic_4643 - NADH dehydrogenase (quinone) 853 66.55 0 973724..975490 + 588 187926811 - Rpic_4644 - AMP-dependent synthetase and ligase 854 66.67 0 975487..976512 + 341 187926812 - Rpic_4645 - pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 855 67.48 0 976509..977492 + 327 187926813 - Rpic_4646 - Transketolase central region 856 67.55 0 977530..978657 + 375 187926814 - Rpic_4647 - catalytic domain of components of various dehydrogenase complexes 857 62.22 0 978654..978923 + 89 187926815 - Rpic_4648 - hypothetical protein 858 62.94 0 978978..979406 - 142 187926816 - Rpic_4649 - hypothetical protein 859 61.24 -1 979488..980888 - 466 187926817 - Rpic_4650 - multi-sensor signal transduction histidine kinase 860 59.59 -1 981255..981593 + 112 187926818 - Rpic_4651 - sigma 54 modulation protein, putative 861 61.67 0 981597..981836 + 79 187926819 - Rpic_4652 - hypothetical protein 862 67.03 0 982190..983827 + 545 187926820 - Rpic_4653 - chaperonin GroEL 863 66.81 0 983869..985230 + 453 187926821 - Rpic_4654 - nicotinate phosphoribosyltransferase 864 64.58 0 985338..986009 - 223 187926822 - Rpic_4655 - protein of unknown function DUF542 ScdA domain protein 865 68.95 +1 986174..987709 + 511 187926823 - Rpic_4656 - transcriptional regulator, NifA subfamily, Fis Family 866 63.89 0 987896..989947 + 683 187926824 - Rpic_4657 - anaerobic ribonucleoside-triphosphate reductase 867 57.63 -2 989944..990120 + 58 187926825 - Rpic_4658 - hypothetical protein 868 67.09 0 990083..990796 + 237 187926826 - Rpic_4659 - anaerobic ribonucleoside-triphosphate reductase activating protein 869 62.39 0 990801..991478 + 225 187926827 - Rpic_4660 - transcriptional regulator, Crp/Fnr family 870 67.84 0 991575..992000 - 141 187926828 - Rpic_4661 - DGC domain protein 871 69.78 +1 992033..992449 - 138 187926829 - Rpic_4662 - hypothetical protein 872 67.34 0 992446..993330 - 294 187926830 - Rpic_4663 - peptidase U32 873 65.88 0 993341..994357 - 338 187926831 - Rpic_4664 - peptidase U32 874 70.25 +1 994402..995685 - 427 187926832 - Rpic_4665 - putative transmembrane protein 875 65.22 0 995921..997237 + 438 187926833 - Rpic_4666 - major facilitator superfamily MFS_1 876 64.29 0 997287..998672 + 461 187926834 - Rpic_4667 - nitrite transporter 877 65.47 0 998685..999353 - 222 187926835 - Rpic_4668 - protein of unknown function DUF161 878 65.22 0 999638..1003375 + 1245 187926836 - Rpic_4669 - nitrate reductase, alpha subunit 879 63.75 0 1003372..1004916 + 514 187926837 - Rpic_4670 - nitrate reductase, beta subunit 880 68.23 +1 1004934..1005635 + 233 187926838 - Rpic_4671 - nitrate reductase molybdenum cofactor assembly chaperone 881 65.64 0 1005632..1006315 + 227 187926839 - Rpic_4672 - respiratory nitrate reductase, gamma subunit 882 68.20 +1 1006317..1006838 + 173 187926840 - Rpic_4673 - molybdopterin-guanine dinucleotide biosynthesis protein B 883 67.84 0 1006900..1008855 + 651 187926841 - Rpic_4674 - multi-sensor signal transduction histidine kinase 884 66.21 0 1008883..1009539 + 218 187926842 - Rpic_4675 - two component transcriptional regulator, LuxR family 885 66.75 0 1009749..1010891 + 380 187926843 - Rpic_4676 - methyltransferase small 886 66.67 0 1010878..1012146 - 422 187926844 - Rpic_4677 - HI0933 family protein 887 62.25 0 1012366..1013202 + 278 187926845 - Rpic_4678 - hypothetical protein 888 63.14 0 1013251..1014723 - 490 187926846 - Rpic_4679 - diguanylate cyclase 889 63.82 0 1015286..1017502 + 738 187926847 - Rpic_4680 - Peptidase M1 membrane alanine aminopeptidase 890 61.73 0 1017619..1017942 - 107 187926848 - Rpic_4681 - nitrogen regulatory protein P-II 891 64.13 0 1017939..1021088 - 1049 187926849 - Rpic_4682 - heavy metal efflux pump, CzcA family 892 66.58 0 1021085..1022305 - 406 187926850 - Rpic_4683 - efflux transporter, RND family, MFP subunit 893 70.60 +1 1022302..1023648 - 448 187926851 - Rpic_4684 - outer membrane efflux protein 894 66.86 0 1023762..1024289 - 175 187926852 - Rpic_4685 - putative transmembrane protein 895 67.13 0 1024341..1025837 - 498 187926853 - Rpic_4686 - integral membrane sensor signal transduction histidine kinase 896 67.12 0 1025834..1026499 - 221 187926854 - Rpic_4687 - two component transcriptional regulator, winged helix family 897 67.45 0 1027087..1028103 + 338 187926855 - Rpic_4688 - diguanylate cyclase 898 63.11 0 1028157..1029281 + 374 187926856 - Rpic_4689 - MscS Mechanosensitive ion channel 899 65.65 0 1029278..1030162 - 294 187926857 - Rpic_4690 - putative transmembrane protein 900 59.74 -1 1030165..1031883 - 572 187926858 - Rpic_4691 - hypothetical protein 901 66.22 0 1031898..1032122 - 74 187926859 - Rpic_4692 - conserved hypothetical signal peptide protein 902 65.95 0 1032358..1033620 - 420 187926860 - Rpic_4693 - UDP-N-acetylglucosamine 2-epimerase 903 65.80 0 1033868..1035592 - 574 187926861 - Rpic_4694 - conserved hypothetical signal peptide protein 904 64.39 0 1035589..1037700 - 703 187926862 - Rpic_4695 - General secretory system II protein E domain protein 905 65.79 0 1038424..1040250 - 608 187926863 - Rpic_4696 - methyl-accepting chemotaxis sensory transducer 906 67.23 0 1040340..1041050 - 236 187926864 - Rpic_4697 - 17 kDa surface antigen 907 67.52 0 1041306..1042238 + 310 187926865 - Rpic_4698 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 908 62.29 0 1042280..1043536 - 418 187926866 - Rpic_4699 - Extracellular ligand-binding receptor 909 66.06 0 1043789..1044442 + 217 187926867 - Rpic_4700 - transcriptional regulator, TetR family 910 67.13 0 1046001..1046435 + 144 187926868 - Rpic_4702 - histidine triad (HIT) protein 911 69.97 +1 1046609..1046971 - 120 187926869 - Rpic_4703 - hypothetical protein 912 66.40 0 1047146..1048669 - 507 187926870 - Rpic_4704 - peptidase M20 913 65.96 0 1048849..1050267 + 472 187926871 - Rpic_4705 - transcriptional regulator, GntR family with aminotransferase domain 914 65.35 0 1050350..1050805 + 151 187926872 - Rpic_4706 - hypothetical protein 915 67.56 0 1050910..1051689 - 259 187926873 - Rpic_4707 - Enoyl-CoA hydratase/isomerase 916 68.05 0 1051686..1052120 - 144 187926874 - Rpic_4708 - transcriptional regulator, MarR family 917 68.92 +1 1052117..1053004 - 295 187926875 - Rpic_4709 - alpha/beta hydrolase-like protein 918 64.71 0 1053121..1053477 + 118 187926876 - Rpic_4710 - transcriptional regulator, ArsR family 919 65.41 0 1053461..1054414 + 317 187926877 - Rpic_4711 - Activator of Hsp90 ATPase 1 family protein 920 65.06 0 1054551..1055672 - 373 187926878 - Rpic_4712 - Beta-ketoacyl-acyl-carrier-protein synthase I 921 64.59 0 1056033..1056707 + 224 187926879 - Rpic_4713 - Phosphoglycerate mutase 922 63.66 0 1056771..1057535 + 254 187926880 - Rpic_4714 - short-chain dehydrogenase/reductase SDR 923 65.14 0 1057608..1058525 + 305 187926881 - Rpic_4715 - beta-lactamase domain protein 924 66.67 0 1058638..1058910 + 90 187926882 - Rpic_4716 - hypothetical protein 925 63.34 0 1059131..1060363 - 410 187926883 - Rpic_4717 - major facilitator superfamily MFS_1 926 65.30 0 1060800..1061018 + 72 187926884 - Rpic_4718 - hypothetical protein 927 65.30 0 1061084..1062109 - 341 187926885 - Rpic_4719 - putative transmembrane protein 928 65.17 0 1062106..1062771 - 221 187926886 - Rpic_4720 - protein of unknown function DUF1345 929 62.09 0 1062849..1063154 - 101 187926887 - Rpic_4721 - hypothetical protein 930 64.30 0 1063280..1063702 - 140 187926888 - Rpic_4722 - conserved hypothetical signal peptide protein 931 68.45 +1 1064115..1064282 + 55 187926889 - Rpic_4723 - putative lipoprotein 932 67.03 0 1064293..1064841 - 182 187926890 - Rpic_4724 - GCN5-related N-acetyltransferase 933 66.46 0 1065014..1065991 + 325 187926891 - Rpic_4725 - Rhodanese domain protein 934 69.90 +1 1066334..1067911 - 525 187926892 - Rpic_4726 - flagellar hook-length control protein 935 62.80 0 1067947..1068411 - 154 187926893 - Rpic_4727 - flagellar export protein FliJ 936 67.85 0 1068520..1069959 - 479 187926894 - Rpic_4728 - flagellar protein export ATPase FliI 937 69.38 +1 1069949..1070686 - 245 187926895 - Rpic_4729 - flagellar assembly protein FliH 938 63.65 0 1070719..1071711 - 330 187926896 - Rpic_4730 - flagellar motor switch protein FliG 939 67.05 0 1071708..1073543 - 611 187926897 - Rpic_4731 - flagellar M-ring protein FliF 940 60.42 -1 1073787..1074122 + 111 187926898 - Rpic_4732 - flagellar hook-basal body complex subunit FliE 941 65.67 0 1074186..1075286 + 366 187926899 - Rpic_4733 - glycosyl transferase family 2 942 63.31 0 1075297..1076070 + 257 187926900 - Rpic_4734 - glucose-1-phosphate cytidylyltransferase 943 66.76 0 1076070..1077161 + 363 187926901 - Rpic_4735 - CDP-glucose 4,6-dehydratase 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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