version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 810 61.45 0 927639..928367 - 242 187926768 - Rpic_4600 - cytochrome c biogenesis protein transmembrane region 811 57.11 -2 928367..928753 - 128 187926769 - Rpic_4601 - Thioredoxin domain 812 59.58 -1 928937..929176 + 79 187926770 - Rpic_4602 - hypothetical protein 813 58.71 -1 929146..929874 + 242 187926771 - Rpic_4603 - hypothetical protein 814 60.44 -1 930187..931086 - 299 187926772 - Rpic_4604 - transcriptional regulator, LysR family 815 55.38 -2 931152..931718 + 188 187926773 - Rpic_4605 - hypothetical protein 816 59.35 -1 932054..932422 + 122 187926774 - Rpic_4607 - copper resistance protein CopC 817 62.33 0 932422..933366 + 314 187926775 - Rpic_4608 - copper resistance D domain protein 818 62.09 0 933578..935938 + 786 187926776 - Rpic_4609 - heavy metal translocating P-type ATPase 819 63.18 0 936293..937123 - 276 187926777 - Rpic_4610 - disulfide isomerase/thiol-disulfide oxidase 820 61.47 0 937217..938332 + 371 187926778 - Rpic_4611 - transcriptional regulator, TetR family 821 61.37 0 938591..940423 + 610 187926779 - Rpic_4612 - diguanylate cyclase/phosphodiesterase 822 63.02 0 940699..942123 + 474 187926780 - Rpic_4613 - Phospholipase C 823 64.77 0 942127..943341 + 404 187926781 - Rpic_4614 - phosphoesterase 824 66.50 0 943496..944722 + 408 187926782 - Rpic_4615 - chromate transporter, chromate ion transporter (CHR) family 825 58.85 -1 944985..945176 - 63 187926783 - Rpic_4616 - 4-oxalocrotonate tautomerase family enzyme 826 63.04 0 945221..946267 - 348 187926784 - Rpic_4617 - 4-hydroxy-2-oxovalerate aldolase 827 65.49 0 946281..947216 - 311 187926785 - Rpic_4618 - acetaldehyde dehydrogenase (acetylating) 828 62.88 0 947254..948045 - 263 187926786 - Rpic_4619 - 4-oxalocrotonate decarboxylase 829 65.52 0 948075..948857 - 260 187926787 - Rpic_4620 - 2-oxopent-4-enoate hydratase 830 67.02 0 948883..949734 - 283 187926788 - Rpic_4621 - alpha/beta hydrolase fold 831 65.98 0 949731..951185 - 484 187926789 - Rpic_4622 - 2-hydroxymuconic semialdehyde dehydrogenase 832 69.32 +1 951235..951687 - 150 187926790 - Rpic_4623 - protein of unknown function DUF336 833 63.92 0 951746..952690 - 314 187926791 - Rpic_4624 - catechol 2,3 dioxygenase 834 66.39 0 952714..953079 - 121 187926792 - Rpic_4625 - ferredoxin 835 67.04 0 953095..954159 - 354 187926793 - Rpic_4626 - Oxidoreductase FAD-binding domain protein 836 63.66 0 954163..954528 - 121 187926794 - Rpic_4627 - Phenol hydroxylase conserved region 837 60.32 -1 954525..956069 - 514 187926795 - Rpic_4628 - methane/phenol/toluene hydroxylase 838 61.11 -1 956115..956384 - 89 187926796 - Rpic_4629 - monooxygenase component MmoB/DmpM 839 67.76 0 956420..957427 - 335 187926797 - Rpic_4630 - Phenol 2-monooxygenase 840 62.38 0 957483..957692 - 69 187926798 - Rpic_4631 - Phenol hydroxylase subunit 841 62.28 0 958407..959912 + 501 187926799 - Rpic_4632 - methane/phenol/toluene hydroxylase 842 61.30 0 959937..960197 + 86 187926800 - Rpic_4633 - Toluene-4-monooxygenase system B 843 63.69 0 960205..960540 + 111 187926801 - Rpic_4634 - Rieske (2Fe-2S) domain protein 844 60.32 -1 960560..960874 + 104 187926802 - Rpic_4635 - monooxygenase component MmoB/DmpM 845 66.77 0 960887..961876 + 329 187926803 - Rpic_4636 - methane/phenol/toluene hydroxylase 846 68.70 +1 961914..962945 + 343 187926804 - Rpic_4637 - Oxidoreductase FAD-binding domain protein 847 65.32 0 963199..964977 + 592 187926805 - Rpic_4638 - putative sigma54 specific transcriptional regulator 848 64.12 0 965041..966417 - 458 187926806 - Rpic_4639 - membrane protein involved in aromatic hydrocarbon degradation 849 67.14 0 966863..968557 + 564 187926807 - Rpic_4640 - putative sigma54 specific transcriptional regulator 850 66.67 0 968554..969303 + 249 187926808 - Rpic_4641 - transcriptional regulator, GntR family 851 66.85 0 969388..972048 - 886 187926809 - Rpic_4642 - formate dehydrogenase, alpha subunit 852 68.88 +1 972036..973478 - 480 187926810 - Rpic_4643 - NADH dehydrogenase (quinone) 853 66.55 0 973724..975490 + 588 187926811 - Rpic_4644 - AMP-dependent synthetase and ligase 854 66.67 0 975487..976512 + 341 187926812 - Rpic_4645 - pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 855 67.48 0 976509..977492 + 327 187926813 - Rpic_4646 - Transketolase central region 856 67.55 0 977530..978657 + 375 187926814 - Rpic_4647 - catalytic domain of components of various dehydrogenase complexes 857 62.22 0 978654..978923 + 89 187926815 - Rpic_4648 - hypothetical protein 858 62.94 0 978978..979406 - 142 187926816 - Rpic_4649 - hypothetical protein 859 61.24 -1 979488..980888 - 466 187926817 - Rpic_4650 - multi-sensor signal transduction histidine kinase 860 59.59 -1 981255..981593 + 112 187926818 - Rpic_4651 - sigma 54 modulation protein, putative 861 61.67 0 981597..981836 + 79 187926819 - Rpic_4652 - hypothetical protein 862 67.03 0 982190..983827 + 545 187926820 - Rpic_4653 - chaperonin GroEL 863 66.81 0 983869..985230 + 453 187926821 - Rpic_4654 - nicotinate phosphoribosyltransferase 864 64.58 0 985338..986009 - 223 187926822 - Rpic_4655 - protein of unknown function DUF542 ScdA domain protein 865 68.95 +1 986174..987709 + 511 187926823 - Rpic_4656 - transcriptional regulator, NifA subfamily, Fis Family 866 63.89 0 987896..989947 + 683 187926824 - Rpic_4657 - anaerobic ribonucleoside-triphosphate reductase 867 57.63 -2 989944..990120 + 58 187926825 - Rpic_4658 - hypothetical protein 868 67.09 0 990083..990796 + 237 187926826 - Rpic_4659 - anaerobic ribonucleoside-triphosphate reductase activating protein 869 62.39 0 990801..991478 + 225 187926827 - Rpic_4660 - transcriptional regulator, Crp/Fnr family 870 67.84 0 991575..992000 - 141 187926828 - Rpic_4661 - DGC domain protein 871 69.78 +1 992033..992449 - 138 187926829 - Rpic_4662 - hypothetical protein 872 67.34 0 992446..993330 - 294 187926830 - Rpic_4663 - peptidase U32 873 65.88 0 993341..994357 - 338 187926831 - Rpic_4664 - peptidase U32 874 70.25 +1 994402..995685 - 427 187926832 - Rpic_4665 - putative transmembrane protein 875 65.22 0 995921..997237 + 438 187926833 - Rpic_4666 - major facilitator superfamily MFS_1 876 64.29 0 997287..998672 + 461 187926834 - Rpic_4667 - nitrite transporter 877 65.47 0 998685..999353 - 222 187926835 - Rpic_4668 - protein of unknown function DUF161 878 65.22 0 999638..1003375 + 1245 187926836 - Rpic_4669 - nitrate reductase, alpha subunit 879 63.75 0 1003372..1004916 + 514 187926837 - Rpic_4670 - nitrate reductase, beta subunit 880 68.23 +1 1004934..1005635 + 233 187926838 - Rpic_4671 - nitrate reductase molybdenum cofactor assembly chaperone 881 65.64 0 1005632..1006315 + 227 187926839 - Rpic_4672 - respiratory nitrate reductase, gamma subunit 882 68.20 +1 1006317..1006838 + 173 187926840 - Rpic_4673 - molybdopterin-guanine dinucleotide biosynthesis protein B 883 67.84 0 1006900..1008855 + 651 187926841 - Rpic_4674 - multi-sensor signal transduction histidine kinase 884 66.21 0 1008883..1009539 + 218 187926842 - Rpic_4675 - two component transcriptional regulator, LuxR family 885 66.75 0 1009749..1010891 + 380 187926843 - Rpic_4676 - methyltransferase small 886 66.67 0 1010878..1012146 - 422 187926844 - Rpic_4677 - HI0933 family protein 887 62.25 0 1012366..1013202 + 278 187926845 - Rpic_4678 - hypothetical protein 888 63.14 0 1013251..1014723 - 490 187926846 - Rpic_4679 - diguanylate cyclase 889 63.82 0 1015286..1017502 + 738 187926847 - Rpic_4680 - Peptidase M1 membrane alanine aminopeptidase 890 61.73 0 1017619..1017942 - 107 187926848 - Rpic_4681 - nitrogen regulatory protein P-II 891 64.13 0 1017939..1021088 - 1049 187926849 - Rpic_4682 - heavy metal efflux pump, CzcA family 892 66.58 0 1021085..1022305 - 406 187926850 - Rpic_4683 - efflux transporter, RND family, MFP subunit 893 70.60 +1 1022302..1023648 - 448 187926851 - Rpic_4684 - outer membrane efflux protein 894 66.86 0 1023762..1024289 - 175 187926852 - Rpic_4685 - putative transmembrane protein 895 67.13 0 1024341..1025837 - 498 187926853 - Rpic_4686 - integral membrane sensor signal transduction histidine kinase 896 67.12 0 1025834..1026499 - 221 187926854 - Rpic_4687 - two component transcriptional regulator, winged helix family 897 67.45 0 1027087..1028103 + 338 187926855 - Rpic_4688 - diguanylate cyclase 898 63.11 0 1028157..1029281 + 374 187926856 - Rpic_4689 - MscS Mechanosensitive ion channel 899 65.65 0 1029278..1030162 - 294 187926857 - Rpic_4690 - putative transmembrane protein 900 59.74 -1 1030165..1031883 - 572 187926858 - Rpic_4691 - hypothetical protein 901 66.22 0 1031898..1032122 - 74 187926859 - Rpic_4692 - conserved hypothetical signal peptide protein 902 65.95 0 1032358..1033620 - 420 187926860 - Rpic_4693 - UDP-N-acetylglucosamine 2-epimerase 903 65.80 0 1033868..1035592 - 574 187926861 - Rpic_4694 - conserved hypothetical signal peptide protein 904 64.39 0 1035589..1037700 - 703 187926862 - Rpic_4695 - General secretory system II protein E domain protein 905 65.79 0 1038424..1040250 - 608 187926863 - Rpic_4696 - methyl-accepting chemotaxis sensory transducer 906 67.23 0 1040340..1041050 - 236 187926864 - Rpic_4697 - 17 kDa surface antigen 907 67.52 0 1041306..1042238 + 310 187926865 - Rpic_4698 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 908 62.29 0 1042280..1043536 - 418 187926866 - Rpic_4699 - Extracellular ligand-binding receptor 909 66.06 0 1043789..1044442 + 217 187926867 - Rpic_4700 - transcriptional regulator, TetR family 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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