version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 497 53.43 -2 572259..572462 - 67 187926455 - Rpic_4276 - cold-shock DNA-binding domain protein 498 62.08 0 572814..574709 + 631 187926456 - Rpic_4277 - K potassium transporter 499 65.20 0 574728..575543 - 271 187926457 - Rpic_4278 - formate dehydrogenase family accessory protein FdhD 500 70.73 +1 575540..575785 - 81 187926458 - Rpic_4279 - hypothetical protein 501 65.85 0 575785..578124 - 779 187926459 - Rpic_4280 - oxidoreductase alpha (molybdopterin) subunit 502 64.41 0 578153..579880 - 575 187926460 - Rpic_4281 - major facilitator superfamily MFS_1 503 63.12 0 580089..580568 - 159 187926461 - Rpic_4282 - Hpt protein 504 61.82 0 580661..583756 - 1031 187926462 - Rpic_4283 - heavy metal efflux pump, CzcA family 505 65.10 0 583759..584907 - 382 187926463 - Rpic_4284 - efflux transporter, RND family, MFP subunit 506 63.97 0 584912..586282 - 456 187926464 - Rpic_4285 - outer membrane efflux protein 507 65.17 0 586440..586841 - 133 187926465 - Rpic_4286 - transcriptional regulator, MerR family 508 66.43 0 586943..587365 + 140 187926466 - Rpic_4287 - hypothetical protein 509 69.54 +1 587379..587795 - 138 187926467 - Rpic_4288 - transport-associated 510 63.27 0 587857..588327 - 156 187926468 - Rpic_4289 - DoxX family protein 511 65.09 0 588324..589082 - 252 187926469 - Rpic_4290 - hypothetical protein 512 64.94 0 589069..589935 - 288 187926470 - Rpic_4291 - protein of unknown function DUF692 513 67.79 0 589957..590223 - 88 187926471 - Rpic_4292 - putative signal peptide protein 514 64.76 0 590452..590976 - 174 187926472 - Rpic_4293 - hypothetical protein 515 65.19 0 591097..591366 - 89 187926473 - Rpic_4294 - hypothetical protein 516 64.54 0 591525..592466 - 313 187926474 - Rpic_4295 - protein of unknown function DUF6 transmembrane 517 62.25 0 592562..593014 + 150 187926475 - Rpic_4296 - transcriptional regulator, AsnC family 518 63.52 0 594314..594790 + 158 187926476 - Rpic_4298 - transcriptional regulator, AsnC family 519 63.89 0 594934..596664 + 576 187926477 - Rpic_4299 - gamma-glutamyltransferase 520 65.36 0 596741..597814 - 357 187926478 - Rpic_4300 - 4-hydroxyphenylpyruvate dioxygenase 521 67.00 0 597896..599086 - 396 187926479 - Rpic_4301 - major facilitator superfamily MFS_1 522 64.87 0 599091..599924 - 277 187926480 - Rpic_4302 - Shikimate dehydrogenase substrate binding domain protein 523 63.35 0 599944..601329 - 461 187926481 - Rpic_4303 - major facilitator superfamily MFS_1 524 65.36 0 601561..602328 - 255 187926482 - Rpic_4304 - transcriptional regulator, IclR family 525 65.45 0 602459..604345 + 628 187926483 - Rpic_4305 - 4-hydroxyphenylpyruvate dioxygenase 526 63.57 0 604467..605531 + 354 187926484 - Rpic_4306 - porin Gram-negative type 527 64.43 0 605599..606852 - 417 187926485 - Rpic_4307 - D-amino-acid dehydrogenase 528 68.94 +1 607168..607959 - 263 187926486 - Rpic_4308 - Ethanolamine ammonia-lyase 529 64.06 0 607980..609362 - 460 187926487 - Rpic_4309 - Ethanolamine ammonia lyase large subunit 530 65.61 0 609487..610722 + 411 187926488 - Rpic_4310 - chromate transporter, chromate ion transporter (CHR) family 531 64.88 0 610773..612170 - 465 187926489 - Rpic_4311 - DEAD/DEAH box helicase domain protein 532 56.70 -2 612185..612505 - 106 187926490 - Rpic_4312 - hypothetical protein 533 64.67 0 612968..614716 + 582 187926491 - Rpic_4313 - Poly-beta-hydroxybutyrate polymerase domain protein 534 63.55 0 614881..615393 + 170 187926492 - Rpic_4315 - hypothetical protein 535 65.70 0 615403..616848 + 481 187926493 - Rpic_4316 - Phosphate butyryltransferase 536 63.03 0 616845..618026 + 393 187926494 - Rpic_4317 - acetate kinase 537 65.13 0 618456..619955 + 499 187926495 - Rpic_4318 - succinic semialdehyde dehydrogenase 538 66.75 0 619991..621160 + 389 187926496 - Rpic_4319 - iron-containing alcohol dehydrogenase 539 62.16 0 621357..622820 + 487 187926497 - Rpic_4320 - flavin-containing monooxygenase FMO 540 66.16 0 622834..623811 + 325 187926498 - Rpic_4321 - Alpha/beta hydrolase fold-3 domain protein 541 61.11 -1 624474..624887 + 137 187926499 - Rpic_4322 - Endoribonuclease L-PSP 542 59.71 -1 624947..626311 + 454 187926500 - Rpic_4323 - protein of unknown function DUF1329 543 61.06 -1 626386..628221 + 611 187926501 - Rpic_4324 - protein of unknown function DUF1302 544 62.69 0 628285..630645 + 786 187926502 - Rpic_4325 - transporter, putative 545 64.20 0 630659..631630 + 323 187926503 - Rpic_4326 - glycosyl hydrolase, BNR repeat 546 61.01 -1 631717..632547 + 276 187926504 - Rpic_4327 - Phytanoyl-CoA dioxygenase 547 59.27 -1 632726..634159 - 477 187926505 - Rpic_4328 - transcriptional regulator, TetR family 548 62.41 0 634876..636237 + 453 187926506 - Rpic_4329 - FAD dependent oxidoreductase 549 60.64 -1 636324..637202 + 292 187926507 - Rpic_4330 - Phytanoyl-CoA dioxygenase 550 64.46 0 637396..638892 + 498 187926508 - Rpic_4331 - Amine oxidase (flavin-containing) 551 58.80 -1 638892..639158 + 88 187926509 - Rpic_4332 - hypothetical protein 552 62.10 0 639276..642275 + 999 187926510 - Rpic_4333 - transposase Tn3 family protein 553 62.20 0 642268..642603 + 111 187926511 - Rpic_4334 - TnpC 554 67.92 0 642769..643962 - 397 187926512 - Rpic_4335 - integrase family protein 555 62.93 0 643997..644638 - 213 187926513 - Rpic_4336 - hypothetical protein 556 63.77 0 644653..644928 - 91 187926514 - Rpic_4337 - plasmid stabilization system 557 69.70 +1 644928..645191 - 87 187926515 - Rpic_4338 - transcriptional regulator, CopG family 558 66.67 0 645243..645974 - 243 187926516 - Rpic_4339 - hypothetical protein 559 66.67 0 646188..647225 + 345 187926517 - Rpic_4340 - hypothetical protein 560 55.78 -2 647610..647912 - 100 187926518 - Rpic_4341 - hypothetical protein 561 58.17 -1 648051..648356 + 101 187926519 - Rpic_4342 - hypothetical protein 562 58.19 -1 648416..648592 + 58 187926520 - Rpic_4343 - hypothetical protein 563 58.17 -1 648610..648915 + 101 187926521 - Rpic_4344 - hypothetical protein 564 54.88 -2 648984..649229 + 81 187926522 - Rpic_4345 - hypothetical protein 565 62.38 0 649234..649443 + 69 187926523 - Rpic_4346 - hypothetical protein 566 59.27 -1 649516..651111 + 531 187926524 - Rpic_4347 - hypothetical protein 567 58.18 -1 651127..651456 + 109 187926525 - Rpic_4348 - minor coat protein 568 59.83 -1 651461..652792 + 443 187926526 - Rpic_4349 - Zonular occludens toxin 569 60.20 -1 653239..654120 + 293 187926527 - Rpic_4350 - hypothetical protein 570 61.55 0 654356..655039 - 227 187926528 - Rpic_4351 - hypothetical protein 571 60.51 -1 655017..657194 - 725 187926529 - Rpic_4352 - type I phosphodiesterase/nucleotide pyrophosphatase 572 60.14 -1 657655..658620 + 321 187926530 - Rpic_4353 - transcriptional regulator, MerR family 573 59.89 -1 658733..659485 + 250 187926531 - Rpic_4354 - short-chain dehydrogenase/reductase SDR 574 60.53 -1 659482..659937 + 151 187926532 - Rpic_4355 - hypothetical protein 575 55.14 -2 659967..660443 + 158 187926533 - Rpic_4356 - succinate dehydrogenase, cytochrome b556 subunit 576 58.74 -1 660454..660819 + 121 187926534 - Rpic_4357 - succinate dehydrogenase, hydrophobic membrane anchor protein 577 64.36 0 660823..662601 + 592 187926535 - Rpic_4358 - succinate dehydrogenase, flavoprotein subunit 578 61.40 0 662624..663325 + 233 187926536 - Rpic_4359 - succinate dehydrogenase and fumarate reductase iron-sulfur protein 579 58.33 -1 663476..664207 - 243 187926537 - Rpic_4360 - hypothetical protein 580 58.29 -1 664204..664836 - 210 187926538 - Rpic_4361 - RNA polymerase, sigma-24 subunit, ECF subfamily 581 58.29 -1 664979..665563 - 194 187926539 - Rpic_4362 - beta-Ig-H3/fasciclin 582 59.97 -1 666070..666651 + 193 187926540 - Rpic_4363 - hypothetical protein 583 63.61 0 666648..667334 + 228 187926541 - Rpic_4364 - hypothetical protein 584 61.78 0 667604..668074 + 156 187926542 - Rpic_4365 - hypothetical protein 585 64.44 0 668002..668181 - 59 187926543 - Rpic_4366 - hypothetical protein 586 61.73 0 668197..669372 - 391 187926544 - Rpic_4367 - efflux transporter, RND family, MFP subunit 587 59.54 -1 669369..671738 - 789 187926545 - Rpic_4368 - protein of unknown function DUF214 588 61.28 0 671732..672436 - 234 187926546 - Rpic_4369 - ABC transporter related 589 58.08 -1 672451..672741 - 96 187926547 - Rpic_4370 - hypothetical protein 590 59.22 -1 672975..673619 - 214 187926548 - Rpic_4371 - putative transmembrane protein 591 63.44 0 673625..675916 - 763 187926549 - Rpic_4372 - heavy metal translocating P-type ATPase 592 62.29 0 675952..676476 - 174 187926550 - Rpic_4373 - cytochrome B561 593 67.30 0 676522..677778 - 418 187926551 - Rpic_4374 - hypothetical protein 594 65.51 0 677775..680888 - 1037 187926552 - Rpic_4375 - heavy metal efflux pump, CzcA family 595 67.86 0 680888..681973 - 361 187926553 - Rpic_4376 - efflux transporter, RND family, MFP subunit 596 62.85 0 682272..682742 - 156 187926554 - Rpic_4377 - hypothetical protein 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0