version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 354 66.11 0 399261..401411 - 716 187926312 - Rpic_4129 - UvrD/REP helicase 355 64.78 0 401512..401829 - 105 187926313 - Rpic_4130 - hypothetical protein 356 66.07 0 401976..402308 - 110 187926314 - Rpic_4131 - protein of unknown function UPF0060 357 69.81 +1 402391..402804 - 137 187926315 - Rpic_4132 - PfkB domain protein 358 66.08 0 402932..403954 - 340 187926316 - Rpic_4133 - GumN family protein 359 65.48 0 404038..405219 - 393 187926317 - Rpic_4134 - hypothetical protein 360 67.91 0 405407..405808 + 133 187926318 - Rpic_4135 - putative transmembrane protein 361 64.08 0 405891..408209 + 772 187926319 - Rpic_4136 - TonB-dependent receptor 362 65.48 0 408197..409462 + 421 187926320 - Rpic_4137 - glycosyl hydrolase BNR repeat-containing protein 363 66.86 0 409459..409965 + 168 187926321 - Rpic_4138 - putative signal peptide protein 364 67.38 0 410199..410477 - 92 187926322 - Rpic_4139 - hypothetical protein 365 65.09 0 410495..411253 - 252 187926323 - Rpic_4140 - protein of unknown function DUF81 366 66.44 0 411384..412268 + 294 187926324 - Rpic_4141 - transcriptional regulator, LysR family 367 67.62 0 412413..412934 + 173 187926325 - Rpic_4142 - putative transmembrane protein 368 65.49 0 413084..414781 + 565 187926326 - Rpic_4143 - AMP-dependent synthetase and ligase 369 61.99 0 414858..415199 - 113 187926327 - Rpic_4144 - hypothetical protein 370 58.71 -1 415470..415670 - 66 187926328 - Rpic_4145 - hypothetical protein 371 66.10 0 416089..417147 + 352 187926329 - Rpic_4146 - putative signal peptide protein 372 60.61 -1 418799..418930 - 43 187926330 - Rpic_4149 - putative lipoprotein transmembrane 373 58.73 -1 418995..419120 - 41 187926331 - Rpic_4150 - hypothetical protein 374 61.22 -1 419356..419502 + 48 187926332 - Rpic_4151 - putative transmembrane protein 375 65.55 0 419646..420272 - 208 187926333 - Rpic_4152 - NAD(P)H dehydrogenase (quinone) 376 66.46 0 420400..421347 + 315 187926334 - Rpic_4153 - transcriptional regulator, LysR family 377 66.79 0 421438..423018 + 526 187926335 - Rpic_4154 - drug resistance transporter, EmrB/QacA subfamily 378 69.12 +1 423030..423926 - 298 187926336 - Rpic_4155 - hypothetical protein 379 63.01 0 424111..425040 + 309 187926337 - Rpic_4156 - putative signal peptide protein 380 67.13 0 425045..425476 - 143 187926338 - Rpic_4157 - hypothetical protein 381 65.50 0 425737..426768 - 343 187926339 - Rpic_4158 - cytochrome bd ubiquinol oxidase subunit II 382 64.05 0 426765..428138 - 457 187926340 - Rpic_4159 - cytochrome bd ubiquinol oxidase subunit I 383 60.96 -1 428154..428714 - 186 187926341 - Rpic_4160 - hypothetical protein 384 63.92 0 428923..429177 + 84 187926342 - Rpic_4161 - Transglycosylase-associated protein 385 61.22 -1 429339..429632 + 97 187926343 - Rpic_4162 - hypothetical protein 386 67.35 0 430017..431339 + 440 187926344 - Rpic_4163 - major facilitator superfamily MFS_1 387 64.67 0 431354..433909 + 851 187926345 - Rpic_4164 - nitrite reductase (NAD(P)H), large subunit 388 64.31 0 433936..434274 + 112 187926346 - Rpic_4165 - nitrite reductase (NAD(P)H), small subunit 389 66.91 0 434314..435546 + 410 187926347 - Rpic_4166 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 390 67.03 0 435846..438593 + 915 187926348 - Rpic_4167 - Nitrate reductase 391 69.43 +1 438704..439318 + 204 187926349 - Rpic_4168 - hypothetical protein 392 65.28 0 439315..440682 + 455 187926350 - Rpic_4169 - MATE efflux family protein 393 68.96 +1 440739..442001 - 420 187926351 - Rpic_4170 - major facilitator superfamily MFS_1 394 64.50 0 442094..443527 - 477 187926352 - Rpic_4171 - phospholipase D/Transphosphatidylase 395 65.66 0 443713..445407 + 564 187926353 - Rpic_4172 - phospholipase D/Transphosphatidylase 396 59.57 -1 445484..445624 - 46 187926354 - Rpic_4173 - Entericidin EcnAB 397 64.56 0 445916..447484 + 522 187926355 - Rpic_4174 - methyl-accepting chemotaxis sensory transducer 398 66.67 0 447541..448956 - 471 187926356 - Rpic_4175 - diguanylate cyclase/phosphodiesterase 399 65.01 0 449181..450086 - 301 187926357 - Rpic_4176 - type IV pilus assembly PilZ 400 64.33 0 450206..450718 + 170 187926358 - Rpic_4177 - GtrA family protein 401 66.87 0 450735..451217 - 160 187926359 - Rpic_4178 - hypothetical protein 402 66.14 0 451870..453210 + 446 187926360 - Rpic_4179 - diguanylate cyclase with PAS/PAC sensor 403 61.70 0 453289..453852 - 187 187926361 - Rpic_4180 - putative signal peptide protein 404 66.60 0 454153..455658 - 501 187926362 - Rpic_4181 - RND efflux system, outer membrane lipoprotein, NodT family 405 64.22 0 455661..458762 - 1033 187926363 - Rpic_4182 - acriflavin resistance protein 406 64.43 0 458759..461893 - 1044 187926364 - Rpic_4183 - acriflavin resistance protein 407 67.03 0 461951..463339 - 462 187926365 - Rpic_4184 - efflux transporter, RND family, MFP subunit 408 67.08 0 463593..464324 + 243 187926366 - Rpic_4185 - two component transcriptional regulator, winged helix family 409 66.43 0 464308..465594 + 428 187926367 - Rpic_4186 - integral membrane sensor signal transduction histidine kinase 410 71.69 +2 465701..466138 + 145 187926368 - Rpic_4187 - protein of unknown function DUF333 411 59.98 -1 467180..467986 + 268 187926369 - Rpic_4189 - transposase IS4 family protein 412 65.01 0 469423..470148 + 241 187926370 - Rpic_4191 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 413 66.99 0 470183..470809 - 208 187926371 - Rpic_4192 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 414 64.08 0 470844..472196 - 450 187926372 - Rpic_4193 - gluconate transporter 415 64.08 0 472277..472663 - 128 187926373 - Rpic_4194 - Endoribonuclease L-PSP 416 67.27 0 472705..474189 - 494 187926374 - Rpic_4195 - N-acyl-D-amino-acid deacylase 417 66.67 0 474191..475084 - 297 187926375 - Rpic_4196 - transcriptional regulator, RpiR family 418 63.77 0 475223..476500 + 425 187926376 - Rpic_4197 - putative D-serine deaminase (D-serine dehydratase) protein 419 65.70 0 476513..477439 + 308 187926377 - Rpic_4198 - PfkB domain protein 420 65.35 0 477767..480196 - 809 187926378 - Rpic_4199 - peptidase S45 penicillin amidase 421 67.45 0 480464..482500 - 678 187926379 - Rpic_4200 - multi-sensor hybrid histidine kinase 422 68.75 +1 482652..483950 - 432 187926380 - Rpic_4201 - major facilitator superfamily MFS_1 423 65.27 0 484103..484459 + 118 187926381 - Rpic_4202 - hypothetical protein 424 62.72 0 484478..484756 - 92 187926382 - Rpic_4203 - hypothetical protein 425 58.63 -1 485110..485358 + 82 187926383 - Rpic_4204 - protein of unknown function DUF1458 426 63.89 0 485424..487586 - 720 187926384 - Rpic_4205 - acid phosphatase 427 66.67 0 487861..489252 + 463 187926385 - Rpic_4206 - Di-haem cytochrome c peroxidase 428 65.28 0 489376..490956 + 526 187926386 - Rpic_4207 - Integral membrane protein TerC 429 67.32 0 490953..491870 - 305 187926387 - Rpic_4208 - protein of unknown function DUF6 transmembrane 430 68.12 +1 491963..492790 - 275 187926388 - Rpic_4209 - transcriptional regulator, AraC family 431 67.37 0 493003..494559 + 518 187926389 - Rpic_4210 - integral membrane sensor signal transduction histidine kinase 432 65.61 0 494543..495202 + 219 187926390 - Rpic_4211 - two component transcriptional regulator, winged helix family 433 68.59 +1 495308..495880 + 190 187926391 - Rpic_4212 - putative lipoprotein signal peptide 434 62.59 0 495942..496382 - 146 187926392 - Rpic_4213 - UspA domain protein 435 67.76 0 496537..497454 - 305 187926393 - Rpic_4214 - transcriptional regulator, AraC family 436 67.59 0 497507..497938 - 143 187926394 - Rpic_4215 - putative signal peptide protein 437 67.77 0 497935..498297 - 120 187926395 - Rpic_4216 - putative glycoprotein 438 65.83 0 499011..501761 + 916 187926396 - Rpic_4217 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 439 66.07 0 501885..502388 + 167 187926397 - Rpic_4218 - putative transmembrane protein 440 68.88 +1 502447..503259 + 270 187926398 - Rpic_4219 - transcriptional regulator, ModE family 441 66.67 0 503267..503764 + 165 187926399 - Rpic_4220 - flavodoxin/nitric oxide synthase 442 66.80 0 503767..504510 - 247 187926400 - Rpic_4221 - ABC transporter related 443 67.98 0 504507..505193 - 228 187926401 - Rpic_4222 - molybdate ABC transporter, inner membrane subunit 444 70.91 +1 505450..506982 - 510 187926402 - Rpic_4223 - RND efflux system, outer membrane lipoprotein, NodT family 445 64.17 0 507044..510250 - 1068 187926403 - Rpic_4224 - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 446 68.27 +1 510280..511590 - 436 187926404 - Rpic_4225 - efflux transporter, RND family, MFP subunit 447 68.13 +1 511706..512797 - 363 187926405 - Rpic_4226 - Alpha/beta hydrolase fold-3 domain protein 448 62.22 0 513138..514082 + 314 187926406 - Rpic_4227 - transcriptional regulator, LysR family 449 65.89 0 514180..514437 + 85 187926407 - Rpic_4228 - hypothetical protein 450 66.67 0 514586..515362 + 258 187926408 - Rpic_4229 - protein of unknown function DUF82 451 63.94 0 515363..516793 - 476 187926409 - Rpic_4230 - alpha,alpha-trehalose-phosphate synthase (UDP-forming) 452 67.79 0 516790..517590 - 266 187926410 - Rpic_4231 - HAD-superfamily hydrolase, subfamily IIB 453 66.33 0 517752..519803 - 683 187926411 - Rpic_4232 - NADH:flavin oxidoreductase/NADH oxidase 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0