version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 260 65.82 0 300214..300921 + 235 187926218 - Rpic_4033 - GCN5-related N-acetyltransferase 261 69.08 +1 300931..302544 - 537 187926219 - Rpic_4034 - putative transmembrane protein 262 65.50 0 302703..303215 - 170 187926220 - Rpic_4035 - hypothetical protein 263 64.72 0 303474..304295 + 273 187926221 - Rpic_4036 - ABC transporter related 264 64.02 0 304279..305109 + 276 187926222 - Rpic_4037 - binding-protein-dependent transport systems inner membrane component 265 62.09 0 305143..306147 + 334 187926223 - Rpic_4038 - NMT1/THI5 like domain protein 266 68.55 +1 306168..306962 + 264 187926224 - Rpic_4039 - transcriptional regulator, IclR family 267 67.34 0 307034..308221 + 395 187926225 - Rpic_4040 - L-carnitine dehydratase/bile acid-inducible protein F 268 68.19 +1 308224..309078 + 284 187926226 - Rpic_4041 - citrate synthase 269 66.11 0 309075..309971 + 298 187926227 - Rpic_4042 - SMP-30/Gluconolaconase/LRE domain protein 270 56.60 -2 310832..311149 + 105 187926228 - Rpic_4043 - flagellar transcriptional activator 271 58.65 -1 311227..311787 + 186 187926229 - Rpic_4044 - flagellar transcriptional activator FlhC 272 61.67 0 312328..313188 + 286 187926230 - Rpic_4045 - flagellar motor protein MotA 273 65.30 0 313389..314336 + 315 187926231 - Rpic_4046 - OmpA/MotB domain protein 274 66.43 0 314362..314775 + 137 187926232 - Rpic_4047 - response regulator receiver protein 275 64.97 0 314794..316968 + 724 187926233 - Rpic_4048 - CheA signal transduction histidine kinase 276 60.57 -1 317049..317540 + 163 187926234 - Rpic_4049 - CheW protein 277 65.85 0 317664..319511 + 615 187926235 - Rpic_4050 - methyl-accepting chemotaxis sensory transducer 278 65.93 0 319736..321640 + 634 187926236 - Rpic_4051 - methyl-accepting chemotaxis sensory transducer 279 62.70 0 321744..322625 + 293 187926237 - Rpic_4052 - MCP methyltransferase, CheR-type 280 64.56 0 322622..323332 + 236 187926238 - Rpic_4053 - CheD 281 66.40 0 323356..324483 + 375 187926239 - Rpic_4054 - response regulator receiver modulated CheB methylesterase 282 60.45 -1 324633..325034 + 133 187926240 - Rpic_4055 - response regulator receiver protein 283 63.98 0 325034..325702 + 222 187926241 - Rpic_4056 - chemotaxis phosphatase, CheZ 284 65.42 0 325778..326818 - 346 187926242 - Rpic_4057 - ApbE family lipoprotein 285 66.43 0 326823..327245 - 140 187926243 - Rpic_4058 - cytochrome c class I 286 61.69 0 327484..329433 + 649 187926244 - Rpic_4059 - Nitrous-oxide reductase 287 64.45 0 329452..332115 + 887 187926245 - Rpic_4060 - FMN-binding domain protein 288 64.27 0 332112..333407 + 431 187926246 - Rpic_4061 - periplasmic copper-binding 289 66.98 0 333385..334341 + 318 187926247 - Rpic_4062 - ABC transporter related 290 65.58 0 334338..335162 + 274 187926248 - Rpic_4063 - putative NosY transmembrane protein 291 68.36 +1 335159..335689 + 176 187926249 - Rpic_4064 - NosL family protein 292 67.66 0 335692..336294 + 200 187926250 - Rpic_4065 - hypothetical protein 293 66.84 0 336488..337651 + 387 187926251 - Rpic_4066 - flagellar biosynthetic protein FlhB 294 64.79 0 337945..340071 + 708 187926252 - Rpic_4067 - flagellar biosynthesis protein FlhA 295 66.51 0 340068..341966 + 632 187926253 - Rpic_4068 - GTP-binding signal recognition particle SRP54 G- domain 296 66.41 0 341982..342773 + 263 187926254 - Rpic_4069 - hypothetical protein 297 63.25 0 342782..343543 + 253 187926255 - Rpic_4070 - RNA polymerase, sigma 28 subunit, FliA/WhiG 298 64.43 0 343922..345349 + 475 187926256 - Rpic_4071 - xanthine permease 299 65.00 0 345378..346460 - 360 187926257 - Rpic_4072 - Aldose 1-epimerase 300 63.48 0 346457..347680 - 407 187926258 - Rpic_4073 - transcriptional regulator, AraC family 301 61.71 0 347950..348978 + 342 187926259 - Rpic_4074 - D-xylose ABC transporter, periplasmic substrate-binding protein 302 63.06 0 349060..350613 + 517 187926260 - Rpic_4075 - D-xylose ABC transporter, ATPase subunit 303 63.59 0 350616..351818 + 400 187926261 - Rpic_4076 - Monosaccharide-transporting ATPase 304 62.76 0 351865..352632 + 255 187926262 - Rpic_4077 - short-chain dehydrogenase/reductase SDR 305 65.67 0 352629..353534 + 301 187926263 - Rpic_4078 - SMP-30/Gluconolaconase/LRE domain protein 306 65.74 0 353525..354709 - 394 187926264 - Rpic_4079 - hypothetical protein 307 66.14 0 354849..355604 + 251 187926265 - Rpic_4080 - transcriptional regulator, IclR family 308 66.86 0 355694..356710 + 338 187926266 - Rpic_4081 - transcriptional regulator, LacI family 309 65.21 0 356732..358516 - 594 187926267 - Rpic_4082 - Dihydroxy-acid dehydratase 310 67.78 0 358820..359359 + 179 187926268 - Rpic_4083 - hypothetical protein 311 64.24 0 359364..360023 - 219 187926269 - Rpic_4084 - isochorismatase hydrolase 312 66.27 0 360158..361153 + 331 187926270 - Rpic_4085 - transcriptional regulator, AraC family 313 67.76 0 361195..361377 - 60 187926271 - Rpic_4086 - 17 kDa surface antigen 314 64.35 0 361450..362010 - 186 187926272 - Rpic_4087 - protein of unknown function YGGT 315 65.96 0 362188..362751 + 187 187926273 - Rpic_4088 - PEBP family protein 316 65.45 0 362801..363787 - 328 187926274 - Rpic_4089 - aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 317 66.33 0 363885..364178 - 97 187926275 - Rpic_4090 - hypothetical protein 318 68.85 +1 364165..365124 - 319 187926276 - Rpic_4091 - PBS lyase HEAT domain protein repeat-containing protein 319 61.05 -1 365132..365398 - 88 187926277 - Rpic_4092 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 320 64.52 0 365401..367125 - 574 187926278 - Rpic_4093 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein 321 66.16 0 367122..367907 - 261 187926279 - Rpic_4094 - transcriptional regulator, GntR family 322 62.01 0 368303..369289 + 328 187926280 - Rpic_4095 - periplasmic binding protein/LacI transcriptional regulator 323 66.29 0 369390..370967 + 525 187926281 - Rpic_4096 - ABC transporter related 324 63.52 0 370964..372013 + 349 187926282 - Rpic_4097 - Monosaccharide-transporting ATPase 325 63.31 0 372010..373083 + 357 187926283 - Rpic_4098 - Monosaccharide-transporting ATPase 326 59.50 -1 373130..373492 + 120 187926284 - Rpic_4099 - 3-dehydroquinate dehydratase 327 57.89 -1 373541..374110 - 189 187926285 - Rpic_4100 - hypothetical protein 328 60.33 -1 374148..374573 - 141 187926286 - Rpic_4101 - hypothetical protein 329 62.59 0 374596..375258 - 220 187926287 - Rpic_4102 - bifunctional deaminase-reductase domain protein 330 64.18 0 375434..376357 + 307 187926288 - Rpic_4103 - putative exonuclease RdgC 331 62.50 0 377283..377714 - 143 187926289 - Rpic_4106 - hypothetical protein 332 66.39 0 378084..379184 + 366 187926290 - Rpic_4107 - branched-chain amino acid aminotransferase 333 67.16 0 379192..380004 + 270 187926291 - Rpic_4108 - alpha/beta hydrolase fold 334 62.63 0 380307..381470 + 387 187926292 - Rpic_4109 - Alkane 1-monooxygenase 335 65.91 0 381480..381743 - 87 187926293 - Rpic_4110 - Cupin 2 conserved barrel domain protein 336 67.11 0 381972..382871 + 299 187926294 - Rpic_4111 - transcriptional regulator, AraC family 337 67.68 0 382967..383857 + 296 187926295 - Rpic_4112 - NmrA family protein 338 63.87 0 383983..384768 + 261 187926296 - Rpic_4113 - hypothetical protein 339 63.81 0 384843..385367 + 174 187926297 - Rpic_4114 - conserved hypothetical signal peptide protein 340 66.67 0 385400..385879 - 159 187926298 - Rpic_4115 - PEBP family protein 341 62.53 0 386098..386460 - 120 187926299 - Rpic_4116 - protein of unknown function DUF1304 342 65.41 0 386646..387362 + 238 187926300 - Rpic_4117 - Carboxymethylenebutenolidase 343 63.74 0 387783..388055 + 90 187926301 - Rpic_4118 - hypothetical protein 344 68.21 +1 388079..389701 - 540 187926302 - Rpic_4119 - amine oxidase 345 64.13 0 389701..391278 - 525 187926303 - Rpic_4120 - Spermine synthase 346 63.41 0 391456..391854 + 132 187926304 - Rpic_4121 - protein of unknown function DUF350 347 65.14 0 391904..392953 + 349 187926305 - Rpic_4122 - putative transmembrane protein 348 66.46 0 393041..394486 + 481 187926306 - Rpic_4123 - putative transmembrane protein 349 64.55 0 394483..394671 + 62 187926307 - Rpic_4124 - putative serine-rich transmembrane protein 350 68.08 +1 394668..395093 + 141 187926308 - Rpic_4125 - S-adenosylmethionine decarboxylase proenzyme 351 63.99 0 395095..396141 - 348 187926309 - Rpic_4126 - diguanylate cyclase with GAF sensor 352 63.71 0 396242..397627 - 461 187926310 - Rpic_4127 - fumarate hydratase, class II 353 65.24 0 397763..399235 + 490 187926311 - Rpic_4128 - drug resistance transporter, EmrB/QacA subfamily 354 66.11 0 399261..401411 - 716 187926312 - Rpic_4129 - UvrD/REP helicase 355 64.78 0 401512..401829 - 105 187926313 - Rpic_4130 - hypothetical protein 356 66.07 0 401976..402308 - 110 187926314 - Rpic_4131 - protein of unknown function UPF0060 357 69.81 +1 402391..402804 - 137 187926315 - Rpic_4132 - PfkB domain protein 358 66.08 0 402932..403954 - 340 187926316 - Rpic_4133 - GumN family protein 359 65.48 0 404038..405219 - 393 187926317 - Rpic_4134 - hypothetical protein 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0