version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 236 65.41 0 276892..277290 - 132 187926194 - Rpic_4008 - hypothetical protein 237 63.85 0 277326..278354 - 342 187926195 - Rpic_4009 - putative periplasmic substrate-binding transmembrane protein 238 62.88 0 278658..279554 - 298 187926196 - Rpic_4010 - binding-protein-dependent transport systems inner membrane component 239 65.03 0 279544..280338 - 264 187926197 - Rpic_4011 - ABC transporter related 240 65.56 0 280395..281117 - 240 187926198 - Rpic_4012 - transcriptional regulator, GntR family 241 64.25 0 281264..283540 - 758 187926199 - Rpic_4013 - putative nitric oxide reductase (subunit B) transmembrane protein 242 67.70 0 283573..283863 - 96 187926200 - Rpic_4014 - hypothetical protein 243 64.20 0 284137..285636 + 499 187926201 - Rpic_4015 - nitrite reductase, copper-containing 244 66.79 0 285653..286444 + 263 187926202 - Rpic_4016 - protein of unknown function DUF323 245 65.81 0 286441..287025 + 194 187926203 - Rpic_4017 - electron transport protein SCO1/SenC 246 64.78 0 287044..287892 - 282 187926204 - Rpic_4018 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 247 64.32 0 287889..288656 - 255 187926205 - Rpic_4019 - transcriptional regulator, GntR family 248 62.46 0 288887..290194 + 435 187926206 - Rpic_4020 - major facilitator superfamily MFS_1 249 63.24 0 290357..291085 + 242 187926207 - Rpic_4021 - Asp/Glu/hydantoin racemase 250 65.11 0 291107..292522 + 471 187926208 - Rpic_4022 - dihydropyrimidinase 251 66.26 0 292553..293290 + 245 187926209 - Rpic_4023 - Asp/Glu/hydantoin racemase 252 65.48 0 293705..293872 - 55 187926210 - Rpic_4025 - putative linoleoyl-CoA desaturase 253 64.82 0 293966..294670 - 234 187926211 - Rpic_4026 - cyclic nucleotide-binding protein 254 65.72 0 294663..295298 - 211 187926212 - Rpic_4027 - DSBA oxidoreductase 255 66.07 0 295308..295982 - 224 187926213 - Rpic_4028 - 3-oxoacid CoA-transferase, B subunit 256 67.58 0 296011..296775 - 254 187926214 - Rpic_4029 - coenzyme A transferase 257 65.85 0 297014..298231 + 405 187926215 - Rpic_4030 - sodium/hydrogen exchanger 258 64.86 0 298275..298829 + 184 187926216 - Rpic_4031 - NADPH-dependent FMN reductase 259 65.01 0 299241..300083 - 280 187926217 - Rpic_4032 - hypothetical protein 260 65.82 0 300214..300921 + 235 187926218 - Rpic_4033 - GCN5-related N-acetyltransferase 261 69.08 +1 300931..302544 - 537 187926219 - Rpic_4034 - putative transmembrane protein 262 65.50 0 302703..303215 - 170 187926220 - Rpic_4035 - hypothetical protein 263 64.72 0 303474..304295 + 273 187926221 - Rpic_4036 - ABC transporter related 264 64.02 0 304279..305109 + 276 187926222 - Rpic_4037 - binding-protein-dependent transport systems inner membrane component 265 62.09 0 305143..306147 + 334 187926223 - Rpic_4038 - NMT1/THI5 like domain protein 266 68.55 +1 306168..306962 + 264 187926224 - Rpic_4039 - transcriptional regulator, IclR family 267 67.34 0 307034..308221 + 395 187926225 - Rpic_4040 - L-carnitine dehydratase/bile acid-inducible protein F 268 68.19 +1 308224..309078 + 284 187926226 - Rpic_4041 - citrate synthase 269 66.11 0 309075..309971 + 298 187926227 - Rpic_4042 - SMP-30/Gluconolaconase/LRE domain protein 270 56.60 -2 310832..311149 + 105 187926228 - Rpic_4043 - flagellar transcriptional activator 271 58.65 -1 311227..311787 + 186 187926229 - Rpic_4044 - flagellar transcriptional activator FlhC 272 61.67 0 312328..313188 + 286 187926230 - Rpic_4045 - flagellar motor protein MotA 273 65.30 0 313389..314336 + 315 187926231 - Rpic_4046 - OmpA/MotB domain protein 274 66.43 0 314362..314775 + 137 187926232 - Rpic_4047 - response regulator receiver protein 275 64.97 0 314794..316968 + 724 187926233 - Rpic_4048 - CheA signal transduction histidine kinase 276 60.57 -1 317049..317540 + 163 187926234 - Rpic_4049 - CheW protein 277 65.85 0 317664..319511 + 615 187926235 - Rpic_4050 - methyl-accepting chemotaxis sensory transducer 278 65.93 0 319736..321640 + 634 187926236 - Rpic_4051 - methyl-accepting chemotaxis sensory transducer 279 62.70 0 321744..322625 + 293 187926237 - Rpic_4052 - MCP methyltransferase, CheR-type 280 64.56 0 322622..323332 + 236 187926238 - Rpic_4053 - CheD 281 66.40 0 323356..324483 + 375 187926239 - Rpic_4054 - response regulator receiver modulated CheB methylesterase 282 60.45 -1 324633..325034 + 133 187926240 - Rpic_4055 - response regulator receiver protein 283 63.98 0 325034..325702 + 222 187926241 - Rpic_4056 - chemotaxis phosphatase, CheZ 284 65.42 0 325778..326818 - 346 187926242 - Rpic_4057 - ApbE family lipoprotein 285 66.43 0 326823..327245 - 140 187926243 - Rpic_4058 - cytochrome c class I 286 61.69 0 327484..329433 + 649 187926244 - Rpic_4059 - Nitrous-oxide reductase 287 64.45 0 329452..332115 + 887 187926245 - Rpic_4060 - FMN-binding domain protein 288 64.27 0 332112..333407 + 431 187926246 - Rpic_4061 - periplasmic copper-binding 289 66.98 0 333385..334341 + 318 187926247 - Rpic_4062 - ABC transporter related 290 65.58 0 334338..335162 + 274 187926248 - Rpic_4063 - putative NosY transmembrane protein 291 68.36 +1 335159..335689 + 176 187926249 - Rpic_4064 - NosL family protein 292 67.66 0 335692..336294 + 200 187926250 - Rpic_4065 - hypothetical protein 293 66.84 0 336488..337651 + 387 187926251 - Rpic_4066 - flagellar biosynthetic protein FlhB 294 64.79 0 337945..340071 + 708 187926252 - Rpic_4067 - flagellar biosynthesis protein FlhA 295 66.51 0 340068..341966 + 632 187926253 - Rpic_4068 - GTP-binding signal recognition particle SRP54 G- domain 296 66.41 0 341982..342773 + 263 187926254 - Rpic_4069 - hypothetical protein 297 63.25 0 342782..343543 + 253 187926255 - Rpic_4070 - RNA polymerase, sigma 28 subunit, FliA/WhiG 298 64.43 0 343922..345349 + 475 187926256 - Rpic_4071 - xanthine permease 299 65.00 0 345378..346460 - 360 187926257 - Rpic_4072 - Aldose 1-epimerase 300 63.48 0 346457..347680 - 407 187926258 - Rpic_4073 - transcriptional regulator, AraC family 301 61.71 0 347950..348978 + 342 187926259 - Rpic_4074 - D-xylose ABC transporter, periplasmic substrate-binding protein 302 63.06 0 349060..350613 + 517 187926260 - Rpic_4075 - D-xylose ABC transporter, ATPase subunit 303 63.59 0 350616..351818 + 400 187926261 - Rpic_4076 - Monosaccharide-transporting ATPase 304 62.76 0 351865..352632 + 255 187926262 - Rpic_4077 - short-chain dehydrogenase/reductase SDR 305 65.67 0 352629..353534 + 301 187926263 - Rpic_4078 - SMP-30/Gluconolaconase/LRE domain protein 306 65.74 0 353525..354709 - 394 187926264 - Rpic_4079 - hypothetical protein 307 66.14 0 354849..355604 + 251 187926265 - Rpic_4080 - transcriptional regulator, IclR family 308 66.86 0 355694..356710 + 338 187926266 - Rpic_4081 - transcriptional regulator, LacI family 309 65.21 0 356732..358516 - 594 187926267 - Rpic_4082 - Dihydroxy-acid dehydratase 310 67.78 0 358820..359359 + 179 187926268 - Rpic_4083 - hypothetical protein 311 64.24 0 359364..360023 - 219 187926269 - Rpic_4084 - isochorismatase hydrolase 312 66.27 0 360158..361153 + 331 187926270 - Rpic_4085 - transcriptional regulator, AraC family 313 67.76 0 361195..361377 - 60 187926271 - Rpic_4086 - 17 kDa surface antigen 314 64.35 0 361450..362010 - 186 187926272 - Rpic_4087 - protein of unknown function YGGT 315 65.96 0 362188..362751 + 187 187926273 - Rpic_4088 - PEBP family protein 316 65.45 0 362801..363787 - 328 187926274 - Rpic_4089 - aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 317 66.33 0 363885..364178 - 97 187926275 - Rpic_4090 - hypothetical protein 318 68.85 +1 364165..365124 - 319 187926276 - Rpic_4091 - PBS lyase HEAT domain protein repeat-containing protein 319 61.05 -1 365132..365398 - 88 187926277 - Rpic_4092 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 320 64.52 0 365401..367125 - 574 187926278 - Rpic_4093 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein 321 66.16 0 367122..367907 - 261 187926279 - Rpic_4094 - transcriptional regulator, GntR family 322 62.01 0 368303..369289 + 328 187926280 - Rpic_4095 - periplasmic binding protein/LacI transcriptional regulator 323 66.29 0 369390..370967 + 525 187926281 - Rpic_4096 - ABC transporter related 324 63.52 0 370964..372013 + 349 187926282 - Rpic_4097 - Monosaccharide-transporting ATPase 325 63.31 0 372010..373083 + 357 187926283 - Rpic_4098 - Monosaccharide-transporting ATPase 326 59.50 -1 373130..373492 + 120 187926284 - Rpic_4099 - 3-dehydroquinate dehydratase 327 57.89 -1 373541..374110 - 189 187926285 - Rpic_4100 - hypothetical protein 328 60.33 -1 374148..374573 - 141 187926286 - Rpic_4101 - hypothetical protein 329 62.59 0 374596..375258 - 220 187926287 - Rpic_4102 - bifunctional deaminase-reductase domain protein 330 64.18 0 375434..376357 + 307 187926288 - Rpic_4103 - putative exonuclease RdgC 331 62.50 0 377283..377714 - 143 187926289 - Rpic_4106 - hypothetical protein 332 66.39 0 378084..379184 + 366 187926290 - Rpic_4107 - branched-chain amino acid aminotransferase 333 67.16 0 379192..380004 + 270 187926291 - Rpic_4108 - alpha/beta hydrolase fold 334 62.63 0 380307..381470 + 387 187926292 - Rpic_4109 - Alkane 1-monooxygenase 335 65.91 0 381480..381743 - 87 187926293 - Rpic_4110 - Cupin 2 conserved barrel domain protein 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0