version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 170 60.28 -1 199347..199910 + 187 187926128 - Rpic_3941 - peroxiredoxin 171 65.71 0 200036..201610 + 524 187926129 - Rpic_3942 - alkyl hydroperoxide reductase, F subunit 172 68.58 +1 201688..202575 - 295 187926130 - Rpic_3943 - transcriptional regulator, LysR family 173 64.69 0 203210..203665 + 151 187926131 - Rpic_3944 - ferric uptake regulator, Fur family 174 63.89 0 203762..204013 + 83 187926132 - Rpic_3945 - hypothetical protein 175 60.13 -1 204023..204328 - 101 187926133 - Rpic_3946 - hypothetical protein 176 69.16 +1 204435..204755 - 106 187926134 - Rpic_3947 - putative transmembrane protein 177 65.49 0 204752..206617 - 621 187926135 - Rpic_3948 - ferrous iron transport protein B 178 69.90 +1 206664..206972 - 102 187926136 - Rpic_3949 - FeoA family protein 179 65.34 0 207660..211211 + 1183 187926137 - Rpic_3950 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 180 66.42 0 211233..212822 - 529 187926138 - Rpic_3951 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 181 70.63 +1 213039..213290 + 83 187926139 - Rpic_3952 - hypothetical protein 182 68.12 +1 213304..214131 - 275 187926140 - Rpic_3953 - FAD-binding 9 siderophore-interacting domain protein 183 63.64 0 214232..214891 - 219 187926141 - Rpic_3954 - transcriptional regulator, PadR-like family 184 68.22 +1 215004..215519 - 171 187926142 - Rpic_3955 - transcriptional regulator, MarR family 185 67.07 0 215598..216095 + 165 187926143 - Rpic_3956 - alkylhydroperoxidase like protein, AhpD family 186 64.67 0 216092..216541 + 149 187926144 - Rpic_3957 - GCN5-related N-acetyltransferase 187 64.91 0 216538..217164 + 208 187926145 - Rpic_3958 - NAD(P)H dehydrogenase (quinone) 188 64.04 0 217230..217877 - 215 187926146 - Rpic_3959 - pyrrolidone-carboxylate peptidase 189 65.24 0 217956..218375 - 139 187926147 - Rpic_3960 - transcriptional regulator, MarR family 190 69.23 +1 218461..220059 - 532 187926148 - Rpic_3961 - hypothetical protein 191 64.83 0 220251..221066 + 271 187926149 - Rpic_3962 - Beta-lactamase 192 68.02 0 221233..221676 + 147 187926150 - Rpic_3963 - hypothetical protein 193 65.55 0 221728..223341 - 537 187926151 - Rpic_3964 - periplasmic glucan biosynthesis protein MdoG 194 65.53 0 223539..224681 + 380 187926152 - Rpic_3965 - beta-lactamase 195 65.83 0 224712..225191 - 159 187926153 - Rpic_3966 - Domain of unknown function DUF1854 196 65.41 0 225205..227511 - 768 187926154 - Rpic_3967 - ABC transporter related 197 65.88 0 227801..230461 + 886 187926155 - Rpic_3968 - cyanophycin synthetase 198 67.02 0 230515..233082 + 855 187926156 - Rpic_3969 - cyanophycin synthetase 199 63.75 0 233728..234309 + 193 187926157 - Rpic_3970 - flavin reductase domain protein FMN-binding 200 62.77 0 234306..234818 + 170 187926158 - Rpic_3971 - GCN5-related N-acetyltransferase 201 65.29 0 234815..235831 - 338 187926159 - Rpic_3972 - transcriptional regulator, AraC family 202 66.93 0 235997..237130 + 377 187926160 - Rpic_3973 - acyl-CoA dehydrogenase domain protein 203 65.55 0 237192..238886 + 564 187926161 - Rpic_3974 - AMP-dependent synthetase and ligase 204 64.79 0 238959..240506 + 515 187926162 - Rpic_3975 - methylmalonate-semialdehyde dehydrogenase 205 65.32 0 240526..241419 + 297 187926163 - Rpic_3976 - 3-hydroxyisobutyrate dehydrogenase 206 66.54 0 241419..242216 + 265 187926164 - Rpic_3977 - Enoyl-CoA hydratase/isomerase 207 67.01 0 242213..243364 + 383 187926165 - Rpic_3978 - Enoyl-CoA hydratase/isomerase 208 63.79 0 243716..245485 + 589 187926166 - Rpic_3979 - hypothetical protein 209 66.67 0 245513..247006 - 497 187926167 - Rpic_3980 - AMP-dependent synthetase and ligase 210 65.81 0 247489..248769 + 426 187926168 - Rpic_3981 - Chloride channel core 211 66.10 0 248808..249518 - 236 187926169 - Rpic_3982 - transcriptional regulator, IclR family 212 66.95 0 249688..250386 + 232 187926170 - Rpic_3983 - Dimethylmenaquinone methyltransferase 213 66.14 0 250386..251336 + 316 187926171 - Rpic_3984 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 214 64.05 0 251336..252292 + 318 187926172 - Rpic_3985 - SMP-30/Gluconolaconase/LRE domain protein 215 65.93 0 252355..253719 + 454 187926173 - Rpic_3986 - major facilitator superfamily MFS_1 216 64.40 0 253796..255121 + 441 187926174 - Rpic_3987 - major facilitator superfamily MFS_1 217 66.50 0 255157..255753 + 198 187926175 - Rpic_3988 - amidohydrolase 2 218 65.12 0 255986..257926 - 646 187926176 - Rpic_3989 - peptidase S8 and S53 subtilisin kexin sedolisin 219 66.86 0 258219..259235 - 338 187926177 - Rpic_3990 - transcriptional regulator, AraC family 220 66.47 0 259323..260840 - 505 187926178 - Rpic_3991 - diguanylate cyclase 221 68.72 +1 261135..261329 + 64 187926179 - Rpic_3992 - hypothetical protein 222 68.07 0 261614..264247 + 877 187926180 - Rpic_3993 - protein of unknown function DUF470 223 67.97 0 264244..266010 + 588 187926181 - Rpic_3994 - virulence factor family protein 224 67.25 0 266070..267791 - 573 187926182 - Rpic_3995 - sulphate transporter 225 71.01 +1 267871..268422 - 183 187926183 - Rpic_3996 - putative alanine-rich signal peptide protein 226 69.26 +1 268632..269558 - 308 187926184 - Rpic_3997 - transcriptional regulator, MarR family 227 65.62 0 269671..270432 + 253 187926185 - Rpic_3998 - short-chain dehydrogenase/reductase SDR 228 65.89 0 270729..271370 + 213 187926186 - Rpic_3999 - YheO domain protein 229 65.85 0 271367..272344 + 325 187926187 - Rpic_4000 - Pyridoxal-5'-phosphate-dependent protein beta subunit 230 66.67 0 272341..272730 + 129 187926188 - Rpic_4001 - Endoribonuclease L-PSP 231 64.97 0 272882..273763 + 293 187926189 - Rpic_4002 - type IV pilus assembly PilZ 232 65.42 0 273768..274652 - 294 187926190 - Rpic_4003 - transcriptional regulator, LysR family 233 60.27 -1 274768..275205 + 145 187926191 - Rpic_4004 - transmembrane pair domain protein 234 68.85 +1 275320..275961 + 213 187926192 - Rpic_4005 - transcriptional regulator, LuxR family 235 65.75 0 275979..276197 - 72 187926193 - Rpic_4006 - hypothetical protein 236 65.41 0 276892..277290 - 132 187926194 - Rpic_4008 - hypothetical protein 237 63.85 0 277326..278354 - 342 187926195 - Rpic_4009 - putative periplasmic substrate-binding transmembrane protein 238 62.88 0 278658..279554 - 298 187926196 - Rpic_4010 - binding-protein-dependent transport systems inner membrane component 239 65.03 0 279544..280338 - 264 187926197 - Rpic_4011 - ABC transporter related 240 65.56 0 280395..281117 - 240 187926198 - Rpic_4012 - transcriptional regulator, GntR family 241 64.25 0 281264..283540 - 758 187926199 - Rpic_4013 - putative nitric oxide reductase (subunit B) transmembrane protein 242 67.70 0 283573..283863 - 96 187926200 - Rpic_4014 - hypothetical protein 243 64.20 0 284137..285636 + 499 187926201 - Rpic_4015 - nitrite reductase, copper-containing 244 66.79 0 285653..286444 + 263 187926202 - Rpic_4016 - protein of unknown function DUF323 245 65.81 0 286441..287025 + 194 187926203 - Rpic_4017 - electron transport protein SCO1/SenC 246 64.78 0 287044..287892 - 282 187926204 - Rpic_4018 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 247 64.32 0 287889..288656 - 255 187926205 - Rpic_4019 - transcriptional regulator, GntR family 248 62.46 0 288887..290194 + 435 187926206 - Rpic_4020 - major facilitator superfamily MFS_1 249 63.24 0 290357..291085 + 242 187926207 - Rpic_4021 - Asp/Glu/hydantoin racemase 250 65.11 0 291107..292522 + 471 187926208 - Rpic_4022 - dihydropyrimidinase 251 66.26 0 292553..293290 + 245 187926209 - Rpic_4023 - Asp/Glu/hydantoin racemase 252 65.48 0 293705..293872 - 55 187926210 - Rpic_4025 - putative linoleoyl-CoA desaturase 253 64.82 0 293966..294670 - 234 187926211 - Rpic_4026 - cyclic nucleotide-binding protein 254 65.72 0 294663..295298 - 211 187926212 - Rpic_4027 - DSBA oxidoreductase 255 66.07 0 295308..295982 - 224 187926213 - Rpic_4028 - 3-oxoacid CoA-transferase, B subunit 256 67.58 0 296011..296775 - 254 187926214 - Rpic_4029 - coenzyme A transferase 257 65.85 0 297014..298231 + 405 187926215 - Rpic_4030 - sodium/hydrogen exchanger 258 64.86 0 298275..298829 + 184 187926216 - Rpic_4031 - NADPH-dependent FMN reductase 259 65.01 0 299241..300083 - 280 187926217 - Rpic_4032 - hypothetical protein 260 65.82 0 300214..300921 + 235 187926218 - Rpic_4033 - GCN5-related N-acetyltransferase 261 69.08 +1 300931..302544 - 537 187926219 - Rpic_4034 - putative transmembrane protein 262 65.50 0 302703..303215 - 170 187926220 - Rpic_4035 - hypothetical protein 263 64.72 0 303474..304295 + 273 187926221 - Rpic_4036 - ABC transporter related 264 64.02 0 304279..305109 + 276 187926222 - Rpic_4037 - binding-protein-dependent transport systems inner membrane component 265 62.09 0 305143..306147 + 334 187926223 - Rpic_4038 - NMT1/THI5 like domain protein 266 68.55 +1 306168..306962 + 264 187926224 - Rpic_4039 - transcriptional regulator, IclR family 267 67.34 0 307034..308221 + 395 187926225 - Rpic_4040 - L-carnitine dehydratase/bile acid-inducible protein F 268 68.19 +1 308224..309078 + 284 187926226 - Rpic_4041 - citrate synthase 269 66.11 0 309075..309971 + 298 187926227 - Rpic_4042 - SMP-30/Gluconolaconase/LRE domain protein 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0