version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 94 69.98 +1 104022..106046 + 674 187926052 - Rpic_3856 - transglutaminase domain protein 95 70.03 +1 106559..107629 + 356 187926053 - Rpic_3857 - putative lipoprotein 96 67.59 0 107724..108911 - 395 187926054 - Rpic_3858 - AcnD-accessory protein PrpF 97 65.20 0 108908..111505 - 865 187926055 - Rpic_3859 - 2-methylisocitrate dehydratase, Fe/S-dependent 98 63.33 0 111821..112990 - 389 187926056 - Rpic_3860 - 2-methylcitrate synthase/citrate synthase II 99 64.21 0 113027..113923 - 298 187926057 - Rpic_3861 - methylisocitrate lyase 100 68.26 +1 114117..116063 + 648 187926058 - Rpic_3862 - proprionate catabolism activator, Fis family 101 64.37 0 116177..116872 + 231 187926059 - Rpic_3863 - metal dependent phosphohydrolase 102 64.96 0 117113..118459 + 448 187926060 - Rpic_3864 - diguanylate cyclase 103 61.23 -1 118482..119051 - 189 187926061 - Rpic_3865 - isochorismatase hydrolase 104 63.46 0 119260..120567 + 435 187926062 - Rpic_3866 - Chloride channel core 105 67.08 0 120619..121098 - 159 187926063 - Rpic_3867 - 3-demethylubiquinone-9 3-methyltransferase 106 67.72 0 121558..122412 - 284 187926064 - Rpic_3869 - putative lipoprotein transmembrane 107 66.56 0 123313..124284 + 323 187926065 - Rpic_3871 - DNA topoisomerase type IA zn finger domain protein 108 51.84 -2 124391..125287 + 298 187926066 - Rpic_3872 - DEAD/DEAH box helicase domain protein 109 44.05 -2 125450..125953 + 167 187926067 - Rpic_3873 - hypothetical protein 110 43.52 -2 126085..127125 - 346 187926068 - Rpic_3874 - hypothetical protein 111 55.91 -2 127550..127828 + 92 187926069 - Rpic_3875 - hypothetical protein 112 66.48 0 128552..129622 - 356 187926070 - Rpic_3878 - putative transmembrane protein 113 65.33 0 129908..132079 + 723 187926071 - Rpic_3879 - PTS system, lactose/cellobiose family IIC subunit 114 63.83 0 132095..132694 - 199 187926072 - Rpic_3880 - hypothetical protein 115 58.59 -1 133388..133783 + 131 187926073 - Rpic_3881 - putative transcriptional regulator 116 65.47 0 133925..134842 + 305 187926074 - Rpic_3882 - protein of unknown function DUF6 transmembrane 117 66.24 0 134874..135800 - 308 187926075 - Rpic_3883 - putative transmembrane protein 118 66.06 0 136065..136883 + 272 187926076 - Rpic_3884 - Enoyl-CoA hydratase/isomerase 119 62.95 0 136993..137907 - 304 187926077 - Rpic_3885 - alpha/beta hydrolase fold 120 65.45 0 138017..138508 + 163 187926078 - Rpic_3886 - transcriptional regulator, HxlR family 121 67.92 0 138768..138926 - 52 187926079 - Rpic_3888 - hypothetical protein 122 69.87 +1 139069..140004 - 311 187926080 - Rpic_3889 - transcriptional regulator, AraC family 123 68.12 +1 140105..140791 + 228 187926081 - Rpic_3890 - ThiJ/PfpI domain protein 124 66.67 0 140827..141666 + 279 187926082 - Rpic_3891 - Adenosylhomocysteine nucleosidase 125 61.18 -1 141672..142127 - 151 187926083 - Rpic_3892 - hypothetical protein 126 66.90 0 142862..143722 + 286 187926084 - Rpic_3894 - hypothetical protein 127 64.51 0 143739..144248 - 169 187926085 - Rpic_3895 - protein of unknown function DUF1697 128 72.96 +2 144448..144876 + 142 187926086 - Rpic_3896 - putative transmembrane protein 129 66.45 0 145064..146443 + 459 187926087 - Rpic_3897 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 130 66.39 0 146521..147603 - 360 187926088 - Rpic_3898 - sodium/calcium exchanger membrane region 131 62.92 0 147727..148581 - 284 187926089 - Rpic_3899 - conserved hypothetical signal peptide protein 132 63.38 0 149036..149491 + 151 187926090 - Rpic_3900 - hypothetical protein 133 66.78 0 149713..150606 - 297 187926091 - Rpic_3902 - transcriptional regulator, LysR family 134 63.45 0 150693..151469 + 258 187926092 - Rpic_3903 - Ribosyldihydronicotinamide dehydrogenase (quinone) 135 65.77 0 151579..152361 + 260 187926093 - Rpic_3904 - protein of unknown function DUF81 136 66.67 0 152394..152789 + 131 187926094 - Rpic_3905 - Carboxymuconolactone decarboxylase 137 63.01 0 152811..153029 + 72 187926095 - Rpic_3906 - hypothetical protein 138 63.70 0 153042..153851 + 269 187926096 - Rpic_3907 - alpha/beta hydrolase fold 139 62.70 0 153991..154494 - 167 187926097 - Rpic_3908 - thioesterase superfamily protein 140 63.81 0 154540..155064 + 174 187926098 - Rpic_3909 - hypothetical protein 141 69.01 +1 155161..155502 + 113 187926099 - Rpic_3910 - hypothetical protein 142 65.25 0 155512..156924 + 470 187926100 - Rpic_3911 - outer membrane efflux protein 143 65.36 0 156927..158225 + 432 187926101 - Rpic_3912 - multicopper oxidase type 3 144 68.92 +1 158267..158755 + 162 187926102 - Rpic_3913 - blue (type 1) copper domain protein 145 63.61 0 158791..159117 + 108 187926103 - Rpic_3914 - hypothetical protein 146 49.21 -2 159508..160515 + 335 187926104 - Rpic_3915 - lipopolysaccharide-modifying protein 147 67.55 0 160642..161433 + 263 187926105 - Rpic_3916 - Phytanoyl-CoA dioxygenase 148 58.56 -1 161531..161752 + 73 187926106 - Rpic_3917 - hypothetical protein 149 66.89 0 161976..162416 + 146 187926107 - Rpic_3918 - hypothetical protein 150 65.49 0 162436..163962 + 508 187926108 - Rpic_3919 - Carotenoid oxygenase 151 64.52 0 163975..165468 - 497 187926109 - Rpic_3920 - peptidase dimerisation domain protein 152 67.76 0 165677..166594 + 305 187926110 - Rpic_3921 - transcriptional regulator, LysR family 153 66.06 0 166611..168092 - 493 187926111 - Rpic_3922 - AMP nucleosidase 154 67.57 0 168140..168913 - 257 187926112 - Rpic_3923 - polar amino acid ABC transporter, inner membrane subunit 155 67.53 0 168910..169602 - 230 187926113 - Rpic_3924 - polar amino acid ABC transporter, inner membrane subunit 156 64.30 0 169674..170561 - 295 187926114 - Rpic_3925 - extracellular solute-binding protein family 3 157 60.36 -1 172660..173166 + 168 187926115 - Rpic_3928 - hypothetical protein 158 64.36 0 173186..174571 - 461 187926116 - Rpic_3929 - integral membrane sensor signal transduction histidine kinase 159 67.73 0 174797..175549 - 250 187926117 - Rpic_3930 - Methyltransferase type 11 160 69.16 +1 175668..176588 - 306 187926118 - Rpic_3931 - amidohydrolase 2 161 66.35 0 176644..177891 - 415 187926119 - Rpic_3932 - major facilitator superfamily MFS_1 162 67.76 0 178027..180849 - 940 187926120 - Rpic_3933 - malto-oligosyltrehalose synthase 163 69.12 +1 180846..183128 - 760 187926121 - Rpic_3934 - 4-alpha-glucanotransferase 164 67.21 0 183167..185008 - 613 187926122 - Rpic_3935 - malto-oligosyltrehalose trehalohydrolase 165 66.32 0 185005..187305 - 766 187926123 - Rpic_3936 - glycogen debranching enzyme GlgX 166 66.88 0 187897..190203 - 768 187926124 - Rpic_3937 - 1,4-alpha-glucan branching enzyme 167 66.12 0 190200..193694 - 1164 187926125 - Rpic_3938 - trehalose synthase 168 67.17 0 193691..197281 - 1196 187926126 - Rpic_3939 - alpha amylase catalytic region 169 67.59 0 197313..198944 - 543 187926127 - Rpic_3940 - glycogen/starch synthase, ADP-glucose type 170 60.28 -1 199347..199910 + 187 187926128 - Rpic_3941 - peroxiredoxin 171 65.71 0 200036..201610 + 524 187926129 - Rpic_3942 - alkyl hydroperoxide reductase, F subunit 172 68.58 +1 201688..202575 - 295 187926130 - Rpic_3943 - transcriptional regulator, LysR family 173 64.69 0 203210..203665 + 151 187926131 - Rpic_3944 - ferric uptake regulator, Fur family 174 63.89 0 203762..204013 + 83 187926132 - Rpic_3945 - hypothetical protein 175 60.13 -1 204023..204328 - 101 187926133 - Rpic_3946 - hypothetical protein 176 69.16 +1 204435..204755 - 106 187926134 - Rpic_3947 - putative transmembrane protein 177 65.49 0 204752..206617 - 621 187926135 - Rpic_3948 - ferrous iron transport protein B 178 69.90 +1 206664..206972 - 102 187926136 - Rpic_3949 - FeoA family protein 179 65.34 0 207660..211211 + 1183 187926137 - Rpic_3950 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 180 66.42 0 211233..212822 - 529 187926138 - Rpic_3951 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 181 70.63 +1 213039..213290 + 83 187926139 - Rpic_3952 - hypothetical protein 182 68.12 +1 213304..214131 - 275 187926140 - Rpic_3953 - FAD-binding 9 siderophore-interacting domain protein 183 63.64 0 214232..214891 - 219 187926141 - Rpic_3954 - transcriptional regulator, PadR-like family 184 68.22 +1 215004..215519 - 171 187926142 - Rpic_3955 - transcriptional regulator, MarR family 185 67.07 0 215598..216095 + 165 187926143 - Rpic_3956 - alkylhydroperoxidase like protein, AhpD family 186 64.67 0 216092..216541 + 149 187926144 - Rpic_3957 - GCN5-related N-acetyltransferase 187 64.91 0 216538..217164 + 208 187926145 - Rpic_3958 - NAD(P)H dehydrogenase (quinone) 188 64.04 0 217230..217877 - 215 187926146 - Rpic_3959 - pyrrolidone-carboxylate peptidase 189 65.24 0 217956..218375 - 139 187926147 - Rpic_3960 - transcriptional regulator, MarR family 190 69.23 +1 218461..220059 - 532 187926148 - Rpic_3961 - hypothetical protein 191 64.83 0 220251..221066 + 271 187926149 - Rpic_3962 - Beta-lactamase 192 68.02 0 221233..221676 + 147 187926150 - Rpic_3963 - hypothetical protein 193 65.55 0 221728..223341 - 537 187926151 - Rpic_3964 - periplasmic glucan biosynthesis protein MdoG 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0