version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 64 66.07 0 74460..74963 - 167 187926022 - Rpic_3826 - protein tyrosine phosphatase 65 64.39 0 74974..75456 - 160 187926023 - Rpic_3827 - Glyoxalase/bleomycin resistance protein/dioxygenase 66 65.88 0 75468..75722 - 84 187926024 - Rpic_3828 - putative transcriptional regulator, ArsR family 67 65.58 0 76071..76991 + 306 187926025 - Rpic_3829 - putative exonuclease RdgC 68 65.78 0 77049..77726 - 225 187926026 - Rpic_3830 - putative periplasmic ligand-binding sensor protein 69 65.32 0 77993..80371 + 792 187926027 - Rpic_3831 - NADH:flavin oxidoreductase/NADH oxidase 70 68.20 +1 80373..81155 + 260 187926028 - Rpic_3832 - short-chain dehydrogenase/reductase SDR 71 65.47 0 81152..81736 + 194 187926029 - Rpic_3833 - transcriptional regulator, MarR family 72 66.43 0 81754..82614 + 286 187926030 - Rpic_3834 - Enoyl-CoA hydratase/isomerase 73 68.03 0 82616..83791 + 391 187926031 - Rpic_3835 - acyl-CoA dehydrogenase domain protein 74 67.22 0 83828..85444 + 538 187926032 - Rpic_3836 - AMP-dependent synthetase and ligase 75 61.81 0 85441..85872 + 143 187926033 - Rpic_3837 - putative 4-hydroxybenzoyl-CoA thioesterase protein 76 65.65 0 85886..86278 + 130 187926034 - Rpic_3838 - Endoribonuclease L-PSP 77 62.86 0 86584..87660 - 358 187926035 - Rpic_3839 - transcriptional regulator, AraC family 78 61.36 0 87800..88195 + 131 187926036 - Rpic_3840 - Carboxymuconolactone decarboxylase 79 63.81 0 88231..89280 + 349 187926037 - Rpic_3841 - protein of unknown function DUF849 80 61.31 0 89396..90217 + 273 187926038 - Rpic_3842 - short-chain dehydrogenase/reductase SDR 81 64.02 0 90335..91618 + 427 187926039 - Rpic_3843 - major facilitator superfamily MFS_1 82 64.60 0 92176..93480 - 434 187926040 - Rpic_3844 - metabolite/H+ symporter, major facilitator superfamily (MFS) 83 66.99 0 93664..94884 - 406 187926041 - Rpic_3845 - major facilitator superfamily MFS_1 84 67.26 0 94984..95820 - 278 187926042 - Rpic_3846 - transcriptional regulator, GntR family 85 67.21 0 95985..96536 - 183 187926043 - Rpic_3847 - transcriptional regulator, HxlR family 86 67.70 0 96670..97248 + 192 187926044 - Rpic_3848 - GCN5-related N-acetyltransferase 87 65.06 0 97487..97921 + 144 187926045 - Rpic_3849 - Glyoxalase/bleomycin resistance protein/dioxygenase 88 68.50 +1 97972..98844 + 290 187926046 - Rpic_3850 - transcriptional regulator, LysR family 89 67.30 0 98945..99730 + 261 187926047 - Rpic_3851 - molybdenum ABC transporter, periplasmic molybdate-binding protein 90 68.67 +1 99735..101033 - 432 187926048 - Rpic_3852 - major facilitator superfamily MFS_1 91 68.22 +1 101195..101836 + 213 187926049 - Rpic_3853 - transcriptional regulator, TetR family 92 69.75 +1 101968..102939 + 323 187926050 - Rpic_3854 - ATPase associated with various cellular activities AAA_3 93 71.04 +1 102952..104025 + 357 187926051 - Rpic_3855 - protein of unknown function DUF58 94 69.98 +1 104022..106046 + 674 187926052 - Rpic_3856 - transglutaminase domain protein 95 70.03 +1 106559..107629 + 356 187926053 - Rpic_3857 - putative lipoprotein 96 67.59 0 107724..108911 - 395 187926054 - Rpic_3858 - AcnD-accessory protein PrpF 97 65.20 0 108908..111505 - 865 187926055 - Rpic_3859 - 2-methylisocitrate dehydratase, Fe/S-dependent 98 63.33 0 111821..112990 - 389 187926056 - Rpic_3860 - 2-methylcitrate synthase/citrate synthase II 99 64.21 0 113027..113923 - 298 187926057 - Rpic_3861 - methylisocitrate lyase 100 68.26 +1 114117..116063 + 648 187926058 - Rpic_3862 - proprionate catabolism activator, Fis family 101 64.37 0 116177..116872 + 231 187926059 - Rpic_3863 - metal dependent phosphohydrolase 102 64.96 0 117113..118459 + 448 187926060 - Rpic_3864 - diguanylate cyclase 103 61.23 -1 118482..119051 - 189 187926061 - Rpic_3865 - isochorismatase hydrolase 104 63.46 0 119260..120567 + 435 187926062 - Rpic_3866 - Chloride channel core 105 67.08 0 120619..121098 - 159 187926063 - Rpic_3867 - 3-demethylubiquinone-9 3-methyltransferase 106 67.72 0 121558..122412 - 284 187926064 - Rpic_3869 - putative lipoprotein transmembrane 107 66.56 0 123313..124284 + 323 187926065 - Rpic_3871 - DNA topoisomerase type IA zn finger domain protein 108 51.84 -2 124391..125287 + 298 187926066 - Rpic_3872 - DEAD/DEAH box helicase domain protein 109 44.05 -2 125450..125953 + 167 187926067 - Rpic_3873 - hypothetical protein 110 43.52 -2 126085..127125 - 346 187926068 - Rpic_3874 - hypothetical protein 111 55.91 -2 127550..127828 + 92 187926069 - Rpic_3875 - hypothetical protein 112 66.48 0 128552..129622 - 356 187926070 - Rpic_3878 - putative transmembrane protein 113 65.33 0 129908..132079 + 723 187926071 - Rpic_3879 - PTS system, lactose/cellobiose family IIC subunit 114 63.83 0 132095..132694 - 199 187926072 - Rpic_3880 - hypothetical protein 115 58.59 -1 133388..133783 + 131 187926073 - Rpic_3881 - putative transcriptional regulator 116 65.47 0 133925..134842 + 305 187926074 - Rpic_3882 - protein of unknown function DUF6 transmembrane 117 66.24 0 134874..135800 - 308 187926075 - Rpic_3883 - putative transmembrane protein 118 66.06 0 136065..136883 + 272 187926076 - Rpic_3884 - Enoyl-CoA hydratase/isomerase 119 62.95 0 136993..137907 - 304 187926077 - Rpic_3885 - alpha/beta hydrolase fold 120 65.45 0 138017..138508 + 163 187926078 - Rpic_3886 - transcriptional regulator, HxlR family 121 67.92 0 138768..138926 - 52 187926079 - Rpic_3888 - hypothetical protein 122 69.87 +1 139069..140004 - 311 187926080 - Rpic_3889 - transcriptional regulator, AraC family 123 68.12 +1 140105..140791 + 228 187926081 - Rpic_3890 - ThiJ/PfpI domain protein 124 66.67 0 140827..141666 + 279 187926082 - Rpic_3891 - Adenosylhomocysteine nucleosidase 125 61.18 -1 141672..142127 - 151 187926083 - Rpic_3892 - hypothetical protein 126 66.90 0 142862..143722 + 286 187926084 - Rpic_3894 - hypothetical protein 127 64.51 0 143739..144248 - 169 187926085 - Rpic_3895 - protein of unknown function DUF1697 128 72.96 +2 144448..144876 + 142 187926086 - Rpic_3896 - putative transmembrane protein 129 66.45 0 145064..146443 + 459 187926087 - Rpic_3897 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 130 66.39 0 146521..147603 - 360 187926088 - Rpic_3898 - sodium/calcium exchanger membrane region 131 62.92 0 147727..148581 - 284 187926089 - Rpic_3899 - conserved hypothetical signal peptide protein 132 63.38 0 149036..149491 + 151 187926090 - Rpic_3900 - hypothetical protein 133 66.78 0 149713..150606 - 297 187926091 - Rpic_3902 - transcriptional regulator, LysR family 134 63.45 0 150693..151469 + 258 187926092 - Rpic_3903 - Ribosyldihydronicotinamide dehydrogenase (quinone) 135 65.77 0 151579..152361 + 260 187926093 - Rpic_3904 - protein of unknown function DUF81 136 66.67 0 152394..152789 + 131 187926094 - Rpic_3905 - Carboxymuconolactone decarboxylase 137 63.01 0 152811..153029 + 72 187926095 - Rpic_3906 - hypothetical protein 138 63.70 0 153042..153851 + 269 187926096 - Rpic_3907 - alpha/beta hydrolase fold 139 62.70 0 153991..154494 - 167 187926097 - Rpic_3908 - thioesterase superfamily protein 140 63.81 0 154540..155064 + 174 187926098 - Rpic_3909 - hypothetical protein 141 69.01 +1 155161..155502 + 113 187926099 - Rpic_3910 - hypothetical protein 142 65.25 0 155512..156924 + 470 187926100 - Rpic_3911 - outer membrane efflux protein 143 65.36 0 156927..158225 + 432 187926101 - Rpic_3912 - multicopper oxidase type 3 144 68.92 +1 158267..158755 + 162 187926102 - Rpic_3913 - blue (type 1) copper domain protein 145 63.61 0 158791..159117 + 108 187926103 - Rpic_3914 - hypothetical protein 146 49.21 -2 159508..160515 + 335 187926104 - Rpic_3915 - lipopolysaccharide-modifying protein 147 67.55 0 160642..161433 + 263 187926105 - Rpic_3916 - Phytanoyl-CoA dioxygenase 148 58.56 -1 161531..161752 + 73 187926106 - Rpic_3917 - hypothetical protein 149 66.89 0 161976..162416 + 146 187926107 - Rpic_3918 - hypothetical protein 150 65.49 0 162436..163962 + 508 187926108 - Rpic_3919 - Carotenoid oxygenase 151 64.52 0 163975..165468 - 497 187926109 - Rpic_3920 - peptidase dimerisation domain protein 152 67.76 0 165677..166594 + 305 187926110 - Rpic_3921 - transcriptional regulator, LysR family 153 66.06 0 166611..168092 - 493 187926111 - Rpic_3922 - AMP nucleosidase 154 67.57 0 168140..168913 - 257 187926112 - Rpic_3923 - polar amino acid ABC transporter, inner membrane subunit 155 67.53 0 168910..169602 - 230 187926113 - Rpic_3924 - polar amino acid ABC transporter, inner membrane subunit 156 64.30 0 169674..170561 - 295 187926114 - Rpic_3925 - extracellular solute-binding protein family 3 157 60.36 -1 172660..173166 + 168 187926115 - Rpic_3928 - hypothetical protein 158 64.36 0 173186..174571 - 461 187926116 - Rpic_3929 - integral membrane sensor signal transduction histidine kinase 159 67.73 0 174797..175549 - 250 187926117 - Rpic_3930 - Methyltransferase type 11 160 69.16 +1 175668..176588 - 306 187926118 - Rpic_3931 - amidohydrolase 2 161 66.35 0 176644..177891 - 415 187926119 - Rpic_3932 - major facilitator superfamily MFS_1 162 67.76 0 178027..180849 - 940 187926120 - Rpic_3933 - malto-oligosyltrehalose synthase 163 69.12 +1 180846..183128 - 760 187926121 - Rpic_3934 - 4-alpha-glucanotransferase 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0