version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1054 67.67 0 1190030..1191025 - 331 187927012 - Rpic_4846 - NAD-dependent epimerase/dehydratase 1055 64.15 0 1191025..1192254 - 409 187927013 - Rpic_4847 - 2-amino-3-ketobutyrate coenzyme A ligase 1056 67.00 0 1192342..1192938 + 198 187927014 - Rpic_4848 - transcriptional regulator, XRE family 1057 69.40 +1 1192944..1194296 - 450 187927015 - Rpic_4849 - MATE efflux family protein 1058 65.45 0 1194561..1196291 + 576 187927016 - Rpic_4850 - amino acid permease-associated region 1059 67.22 0 1196555..1197457 - 300 187927017 - Rpic_4851 - transcriptional regulator, LysR family 1060 65.31 0 1197560..1198444 + 294 187927018 - Rpic_4852 - aldo/keto reductase 1061 67.89 0 1198559..1198804 - 81 187927019 - Rpic_4853 - transcriptional regulator, MerR family 1062 65.43 0 1199099..1200883 + 594 187927020 - Rpic_4854 - diguanylate cyclase/phosphodiesterase 1063 63.42 0 1201424..1202842 + 472 187927021 - Rpic_4855 - coagulation factor 5/8 type domain protein 1064 68.71 +1 1203015..1204682 + 555 187927022 - Rpic_4856 - hypothetical protein 1065 68.44 +1 1204705..1205718 + 337 187927023 - Rpic_4857 - 2-dehydropantoate 2-reductase 1066 65.51 0 1205715..1206407 - 230 187927024 - Rpic_4858 - transcriptional regulator, Crp/Fnr family 1067 64.72 0 1206572..1207084 - 170 187927025 - Rpic_4859 - hypothetical protein 1068 68.83 +1 1207113..1207712 + 199 187927026 - Rpic_4860 - chorismate mutase 1069 66.33 0 1207797..1209275 - 492 187927027 - Rpic_4861 - protease Do 1070 71.45 +1 1209422..1210738 - 438 187927028 - Rpic_4862 - integral membrane sensor signal transduction histidine kinase 1071 67.62 0 1210742..1211476 - 244 187927029 - Rpic_4863 - two component transcriptional regulator, winged helix family 1072 69.63 +1 1211599..1212441 + 280 187927030 - Rpic_4864 - transcriptional regulator, RpiR family 1073 67.61 0 1212464..1213519 - 351 187927031 - Rpic_4865 - glucokinase 1074 69.79 +1 1213500..1214204 - 234 187927032 - Rpic_4866 - 6-phosphogluconolactonase 1075 65.85 0 1214204..1215673 - 489 187927033 - Rpic_4867 - glucose-6-phosphate 1-dehydrogenase 1076 67.92 0 1215981..1217819 + 612 187927034 - Rpic_4868 - 6-phosphogluconate dehydratase 1077 64.04 0 1217836..1218291 - 151 187927035 - Rpic_4869 - UspA domain protein 1078 68.38 +1 1218425..1218892 + 155 187927036 - Rpic_4870 - hypothetical protein 1079 63.74 0 1218992..1219504 + 170 187927037 - Rpic_4871 - hypothetical protein 1080 65.62 0 1219733..1220881 + 382 187927038 - Rpic_4872 - cytochrome c oxidase subunit II 1081 63.09 0 1220894..1222654 + 586 187927039 - Rpic_4873 - cytochrome c oxidase, subunit I 1082 67.00 0 1222651..1223259 + 202 187927040 - Rpic_4874 - cytochrome c oxidase subunit III 1083 63.92 0 1223256..1223948 + 230 187927041 - Rpic_4875 - cytochrome c oxidase subunit III 1084 62.07 0 1223956..1224303 + 115 187927042 - Rpic_4876 - hypothetical protein 1085 66.75 0 1224325..1225560 - 411 187927043 - Rpic_4877 - Cystathionine gamma-synthase 1086 68.58 +1 1225653..1228628 + 991 187927044 - Rpic_4878 - response regulator receiver protein 1087 68.15 +1 1228642..1229181 + 179 187927045 - Rpic_4879 - hypothetical protein 1088 70.85 +1 1229531..1230844 + 437 187927046 - Rpic_4880 - glycosyl transferase group 1 1089 67.16 0 1230841..1231656 + 271 187927047 - Rpic_4881 - short-chain dehydrogenase/reductase SDR 1090 69.92 +1 1231647..1232261 + 204 187927048 - Rpic_4882 - histidinol-phosphate phosphatase family protein 1091 71.04 +1 1232258..1233469 + 403 187927049 - Rpic_4883 - glycosyl transferase family 9 1092 68.09 +1 1233509..1235338 + 609 187927050 - Rpic_4884 - Carbamoyltransferase 1093 70.05 +1 1235335..1236369 + 344 187927051 - Rpic_4885 - glycosyl transferase family 2 1094 71.99 +2 1236366..1237511 + 381 187927052 - Rpic_4886 - glycosyl transferase family 9 1095 67.17 0 1237508..1238500 + 330 187927053 - Rpic_4887 - glycosyl transferase, group 1 1096 66.37 0 1238497..1239519 + 340 187927054 - Rpic_4888 - NAD-dependent epimerase/dehydratase 1097 70.24 +1 1239541..1240464 - 307 187927055 - Rpic_4889 - glycosyl transferase family 2 1098 68.88 +1 1240448..1241170 - 240 187927056 - Rpic_4890 - LmbE family protein 1099 67.95 0 1241167..1241322 - 51 187927057 - Rpic_4891 - hypothetical protein 1100 66.67 0 1241408..1242679 - 423 187927058 - Rpic_4892 - natural resistance-associated macrophage protein 1101 70.41 +1 1242693..1242959 - 88 187927059 - Rpic_4893 - hypothetical protein 1102 67.28 0 1242995..1243486 - 163 187927060 - Rpic_4894 - hypothetical protein 1103 65.39 0 1243641..1244501 + 286 187927061 - Rpic_4895 - short-chain dehydrogenase/reductase SDR 1104 64.76 0 1244823..1248029 + 1068 187927062 - Rpic_4896 - acriflavin resistance protein 1105 68.65 +1 1248022..1249335 + 437 187927063 - Rpic_4897 - efflux transporter, RND family, MFP subunit 1106 68.73 +1 1249332..1250786 + 484 187927064 - Rpic_4898 - RND efflux system, outer membrane lipoprotein, NodT family 1107 67.96 0 1250790..1251719 - 309 187927065 - Rpic_4899 - hypothetical protein 1108 64.71 0 1252171..1252527 + 118 187927066 - Rpic_4900 - Endoribonuclease L-PSP 1109 66.75 0 1252541..1253791 + 416 187927067 - Rpic_4901 - FAD dependent oxidoreductase 1110 67.82 0 1253793..1255271 - 492 187927068 - Rpic_4902 - MlrC domain protein 1111 67.54 0 1255292..1256554 - 420 187927069 - Rpic_4903 - amidase, hydantoinase/carbamoylase family 1112 65.27 0 1256551..1257264 - 237 187927070 - Rpic_4904 - ABC transporter related 1113 66.80 0 1257261..1258031 - 256 187927071 - Rpic_4905 - ABC transporter related 1114 64.91 0 1258028..1258996 - 322 187927072 - Rpic_4906 - inner-membrane translocator 1115 66.90 0 1258996..1259853 - 285 187927073 - Rpic_4907 - inner-membrane translocator 1116 63.58 0 1259915..1261114 - 399 187927074 - Rpic_4908 - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 1117 44.79 -2 1261183..1261278 - 31 187927075 - Rpic_4909 - hypothetical protein 1118 64.17 0 1261470..1262309 + 279 187927076 - Rpic_4910 - GntR domain protein 1119 61.71 0 1262314..1262757 - 147 187927077 - Rpic_4911 - cyanate lyase 1120 63.53 0 1263058..1264428 + 456 187927078 - Rpic_4912 - Carbohydrate-selective porin OprB 1121 61.41 0 1264460..1265467 + 335 187927079 - Rpic_4913 - D-xylose ABC transporter, periplasmic substrate-binding protein 1122 64.34 0 1265498..1267045 + 515 187927080 - Rpic_4914 - D-xylose ABC transporter, ATPase subunit 1123 64.93 0 1267052..1268260 + 402 187927081 - Rpic_4915 - Monosaccharide-transporting ATPase 1124 66.88 0 1268396..1269313 + 305 187927082 - Rpic_4916 - NAD-dependent epimerase/dehydratase 1125 55.99 -2 1269371..1270588 - 405 187927083 - Rpic_4917 - hypothetical protein 1126 64.75 0 1271045..1272085 - 346 187927084 - Rpic_4918 - transcriptional regulator, LacI family 1127 64.77 0 1272188..1273081 - 297 187927085 - Rpic_4919 - protein of unknown function DUF6 transmembrane 1128 65.91 0 1273189..1273986 + 265 187927086 - Rpic_4920 - transcriptional regulator, AraC family 1129 67.68 0 1274329..1274823 + 164 187927087 - Rpic_4921 - hypothetical protein 1130 66.26 0 1274820..1275308 + 162 187927088 - Rpic_4922 - hypothetical protein 1131 63.79 0 1275421..1275837 + 138 187927089 - Rpic_4923 - transcriptional regulator, MarR family 1132 59.29 -1 1275888..1276280 + 130 187927090 - Rpic_4924 - 4-oxalocrotonate tautomerase 1133 61.67 0 1276280..1276459 + 59 187927091 - Rpic_4925 - hypothetical protein 1134 67.84 0 1276476..1277495 - 339 187927092 - Rpic_4926 - transcriptional regulator, AraC family 1135 65.00 0 1277581..1278723 + 380 187927093 - Rpic_4927 - acyl-CoA dehydrogenase domain protein 1136 67.99 0 1278751..1279956 + 401 187927094 - Rpic_4928 - acetyl-CoA acetyltransferase 1137 67.84 0 1279970..1282096 + 708 187927095 - Rpic_4929 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding 1138 64.49 0 1282421..1285084 + 887 187927096 - Rpic_4930 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1139 64.57 0 1285820..1286296 + 158 187927097 - Rpic_4933 - protein of unknown function DUF305 1140 62.53 0 1286296..1287771 + 491 187927098 - Rpic_4934 - 40-residue YVTN family beta-propeller repeat protein 1141 65.49 0 1287897..1288493 + 198 187927099 - Rpic_4935 - heat shock protein DnaJ domain protein 1142 60.13 -1 1288862..1290253 + 463 187927100 - Rpic_4936 - extracellular solute-binding protein family 1 1143 59.90 -1 1290250..1293192 + 980 187927101 - Rpic_4937 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1144 63.13 0 1293429..1294334 - 301 187927102 - Rpic_4938 - transcriptional regulator, LysR family 1145 66.43 0 1294500..1296188 + 562 187927103 - Rpic_4939 - malonate decarboxylase, alpha subunit 1146 67.53 0 1296188..1297117 + 309 187927104 - Rpic_4940 - triphosphoribosyl-dephospho-CoA synthase MdcB 1147 65.36 0 1297104..1297409 + 101 187927105 - Rpic_4941 - malonate decarboxylase acyl carrier protein 1148 66.67 0 1297419..1298264 + 281 187927106 - Rpic_4942 - malonate decarboxylase, beta subunit 1149 68.47 +1 1298261..1299091 + 276 187927107 - Rpic_4943 - malonate decarboxylase, gamma subunit 1150 66.91 0 1299462..1299869 + 135 187927108 - Rpic_4944 - malonate transporter, MadL subunit 1151 66.14 0 1299881..1300645 + 254 187927109 - Rpic_4945 - malonate transporter, MadM subunit 1152 69.18 +1 1300642..1301277 + 211 187927110 - Rpic_4946 - phosphoribosyl-dephospho-CoA transferase 1153 66.03 0 1301274..1302209 + 311 187927111 - Rpic_4947 - malonate decarboxylase, epsilon subunit 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0