version 1.0
Ralstonia metallidurans CH34 chromosome 2, complete sequence - 1..2580084 2313 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 494 64.82 0 538295..539161 + 288 94313041 pdxK Rmet_4114 - pyridoxal kinase 495 65.08 0 539166..539417 + 83 94313042 - Rmet_4115 - hypothetical protein 496 64.56 0 539475..540329 - 284 94313043 - Rmet_4116 - phosphatidylserine decarboxylase 497 65.90 0 540499..541794 - 431 94313044 - Rmet_4117 - GntR family transcriptional regulator 498 63.49 0 541873..542124 - 83 94313045 - Rmet_4118 - hypothetical protein 499 64.16 0 542206..542643 + 145 94313046 - Rmet_4119 - hypothetical protein 500 67.75 +1 542842..544224 + 460 94313047 - Rmet_4120 - outer membrane efflux protein 501 65.97 0 544227..545381 + 384 94313048 - Rmet_4121 - secretion protein HlyD 502 61.81 0 545466..546494 - 342 94313049 - Rmet_4122 - integrase catalytic subunit 503 64.39 0 546539..549610 + 1023 94313050 - Rmet_4123 - heavy metal efflux pump CzcA 504 68.27 +1 549712..550086 + 124 94313051 - Rmet_4124 - hypothetical protein 505 62.65 0 550235..550732 + 165 94313052 - Rmet_4125 - hypothetical protein 506 67.14 0 550827..551459 + 210 94313053 - Rmet_4126 - nitrogen fixation protein NifQ, putative 507 66.67 0 551518..551862 - 114 94313054 - Rmet_4127 - hypothetical protein 508 71.51 +2 552077..553006 + 309 94313055 - Rmet_4128 - hypothetical protein 509 70.39 +1 553023..554606 + 527 94313056 - Rmet_4129 - hypothetical protein 510 66.15 0 554633..558094 + 1153 94313057 dnaE2 Rmet_4130 - error-prone DNA polymerase 511 60.40 0 558373..559026 - 217 94313058 - Rmet_4131 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 512 70.11 +1 559200..560333 - 377 94313059 - Rmet_4132 - branched-chain alpha-keto acid dehydrogenase subunit E2 513 69.72 +1 560350..561330 - 326 94313060 - Rmet_4133 - transketolase, central region 514 67.03 0 561323..562426 - 367 94313061 - Rmet_4134 - dehydrogenase, E1 component 515 67.73 +1 562614..563084 - 156 94313062 - Rmet_4135 - hypothetical protein 516 64.51 0 563265..564191 + 308 94313063 - Rmet_4136 - taurine catabolism dioxygenase TauD/TfdA 517 62.38 0 564241..565266 + 341 94313064 - Rmet_4137 - putative periplasmic protein 518 67.26 0 565268..566107 + 279 94313065 - Rmet_4138 - ABC transporter related 519 67.12 0 566146..567024 + 292 94313066 - Rmet_4139 - binding-protein-dependent transport systems inner membrane component 520 67.84 +1 567109..567876 + 255 94313067 - Rmet_4140 - methyltransferase type 11 521 69.11 +1 567910..569136 - 408 94313068 - Rmet_4141 - hypothetical protein 522 68.60 +1 569339..570115 + 258 94313069 - Rmet_4142 - IclR family transcriptional regulator 523 67.15 0 570267..571496 + 409 94313070 - Rmet_4143 - diguanylate cyclase 524 67.84 +1 571539..572393 - 284 94313071 - Rmet_4144 - citrate synthase 525 66.27 0 572390..573634 - 414 94313072 - Rmet_4145 - L-carnitine dehydratase/bile acid-inducible protein F 526 69.12 +1 573627..574646 - 339 94313073 - Rmet_4146 - hypothetical protein 527 70.52 +1 574963..575610 - 215 94313074 - Rmet_4147 - hypothetical protein 528 67.91 +1 575639..577648 - 669 94313075 - Rmet_4148 - squalene cyclase 529 69.14 +1 577724..578572 - 282 94313076 - Rmet_4149 - squalene/phytoene synthase 530 61.58 0 578683..579252 - 189 94313077 - Rmet_4150 - putative signal peptide protein 531 55.39 -2 579337..579540 - 67 94313078 - Rmet_4151 - cold-shock DNA-binding protein family protein 532 60.25 -1 579545..580510 - 321 94313079 - Rmet_4152 - integrase catalytic subunit 533 59.95 -1 580886..581986 - 366 94313080 - Rmet_4153 - IS4 family transposase 534 69.07 +1 582742..583950 + 402 94313081 - Rmet_4154 - IS4 family transposase 535 64.47 0 584239..587100 + 953 94313082 - Rmet_4155 - putative signal peptide protein 536 66.72 0 587114..591220 + 1368 94313083 - Rmet_4156 - tetratricopeptide TPR_4 537 70.13 +1 591272..591820 + 182 94313084 - Rmet_4157 - putative lipoprotein 538 68.24 +1 591844..593307 + 487 94313085 - Rmet_4158 - putative transmembrane protein 539 67.38 +1 593311..594297 + 328 94313086 - Rmet_4159 - putative transmembrane protein 540 64.15 0 594294..595883 + 529 94313087 - Rmet_4160 - glycosyl transferase, group 1 541 60.54 0 595885..597255 + 456 94313088 - Rmet_4161 - putative transmembrane protein 542 64.23 0 597464..598162 + 232 94313089 - Rmet_4162 - two component transcriptional regulator 543 68.28 +1 598155..599825 + 556 94313090 - Rmet_4163 - peptidoglycan-binding LysM 544 67.72 +1 599812..602271 + 819 94313091 - Rmet_4164 - periplasmic sensor signal transduction histidine kinase 545 65.87 0 602516..603391 - 291 94313092 - Rmet_4165 - VacJ-like lipoprotein 546 67.36 +1 603436..606162 - 908 94313093 - Rmet_4166 - hypothetical protein 547 62.86 0 606344..606973 + 209 94313094 - Rmet_4167 - toluene tolerance 548 64.18 0 607077..608243 - 388 94313095 - Rmet_4168 - radical SAM family protein 549 63.76 0 608272..609270 - 332 94313096 ispH Rmet_4169 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 550 65.83 0 609425..610501 + 358 94313097 - Rmet_4170 - NAD-dependent epimerase/dehydratase 551 67.63 +1 610539..611681 - 380 94313098 - Rmet_4171 - glycosyl transferase family protein 552 65.00 0 611688..612704 - 338 94313099 - Rmet_4172 - hypothetical protein 553 69.20 +1 612837..613112 - 91 94313100 - Rmet_4173 - hypothetical protein 554 65.04 0 613175..613420 - 81 94313101 - Rmet_4174 - hypothetical protein 555 66.42 0 613530..614756 + 408 94313102 - Rmet_4175 - N-acylglucosamine 2-epimerase 556 66.11 0 614764..615660 - 298 94313103 - Rmet_4176 - LysR family transcriptional regulator 557 63.90 0 615749..617158 + 469 94313104 - Rmet_4177 - EmrB/QacA family drug resistance transporter 558 62.41 0 617197..617337 - 46 94313105 - Rmet_4178 - hypothetical protein 559 64.80 0 617359..617733 - 124 94313106 - Rmet_4179 - hypothetical protein 560 64.01 0 618010..618876 - 288 94313107 - Rmet_4180 - LysR family transcriptional regulator 561 59.06 -1 618973..619353 + 126 94313108 - Rmet_4181 - 4-oxalocrotonate tautomerase 562 65.77 0 619619..620290 - 223 94313109 - Rmet_4182 - phospholipase/carboxylesterase 563 61.62 0 620417..620713 - 98 94313110 - Rmet_4183 - hypothetical protein 564 61.81 0 620777..621085 - 102 94313111 - Rmet_4184 - hypothetical protein 565 65.64 0 621286..622359 + 357 94313112 - Rmet_4185 - methyl-accepting chemotaxis sensory transducer 566 66.32 0 622377..623246 - 289 94313113 - Rmet_4186 - hypothetical protein 567 63.86 0 623703..624200 + 165 94313114 - Rmet_4187 - hypothetical protein 568 62.74 0 624421..625056 + 211 94313115 - Rmet_4188 - TetR family transcriptional regulator 569 68.34 +1 625103..625879 - 258 94313116 - Rmet_4189 - alpha/beta fold family hydrolase 570 64.15 0 625876..626907 - 343 94313117 - Rmet_4190 - hypothetical protein 571 66.01 0 626953..627867 - 304 94313118 - Rmet_4191 - LysR family transcriptional regulator 572 66.34 0 628150..630294 - 714 94313119 - Rmet_4192 - twin-arginine translocation pathway signal 573 66.67 0 631021..631506 + 161 94313120 - Rmet_4193 - hypothetical protein 574 67.54 +1 631532..632680 - 382 94313121 - Rmet_4194 - alanine racemase-like protein 575 64.28 0 632898..634445 + 515 94313122 - Rmet_4195 - methyl-accepting chemotaxis sensory transducer 576 63.64 0 634495..635088 - 197 94313123 - Rmet_4196 - DSBA oxidoreductase 577 61.87 0 635158..636054 - 298 94313124 - Rmet_4197 - short-chain dehydrogenase/reductase SDR 578 65.32 0 636079..636822 + 247 94313125 - Rmet_4198 - PadR family transcriptional regulator 579 66.42 0 636819..637631 + 270 94313126 - Rmet_4199 - FAD-binding 9, siderophore-interacting 580 62.69 0 637731..638132 + 133 94313127 - Rmet_4200 - hypothetical protein 581 63.38 0 638276..639493 + 405 94313128 - Rmet_4201 - aminotransferase 582 65.43 0 639562..640449 - 295 94313129 - Rmet_4202 - LysR family transcriptional regulator 583 65.48 0 640550..641557 + 335 94313130 - Rmet_4203 - hypothetical protein 584 64.91 0 641651..642388 + 245 94313131 - Rmet_4204 - LmbE-like protein 585 65.69 0 642385..643098 + 237 94313132 - Rmet_4205 - hypothetical protein 586 65.30 0 643210..644160 + 316 94313133 - Rmet_4206 - LysR family transcriptional regulator 587 61.81 0 644570..645598 + 342 94313134 - Rmet_4207 - integrase catalytic subunit 588 64.07 0 645587..645856 - 89 94313135 - Rmet_4208 - hypothetical protein 589 64.55 0 645853..646230 - 125 94313136 - Rmet_4209 - hypothetical protein 590 65.62 0 646549..647982 + 477 94313137 - Rmet_4210 - tricarballylate dehydrogenase 591 66.41 0 647969..649141 + 390 94313138 - Rmet_4211 - citrate utilization protein B 592 63.24 0 649184..649972 + 262 94313139 - Rmet_4212 - class II aldolase/adducin-like protein 593 64.12 0 650173..651153 + 326 94313140 - Rmet_4213 - hypothetical protein 63.77 MEAN 3.52 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0