version 1.0
Ralstonia metallidurans CH34 chromosome 2, complete sequence - 1..2580084 2313 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 456 66.47 0 496166..497161 + 331 94313003 - Rmet_4075 - acyl-CoA dehydrogenase-like protein 457 64.28 0 497224..498018 - 264 94313004 - Rmet_4076 - short-chain dehydrogenase/reductase SDR 458 60.86 0 498208..499551 - 447 94313005 - Rmet_4077 - TRAP transporter solute receptor TAXI family protein 459 63.94 0 499905..501332 - 475 94313006 - Rmet_4078 - major facilitator transporter 460 64.06 0 502667..503050 + 127 94313007 - Rmet_4080 - hypothetical protein 461 60.44 0 503243..503692 - 149 94313008 - Rmet_4081 - hypothetical protein 462 62.24 0 503870..504163 - 97 94313009 - Rmet_4082 - hypothetical protein 463 62.11 0 504259..504543 - 94 94313010 - Rmet_4083 - hypothetical protein 464 64.07 0 504646..506106 + 486 94313011 - Rmet_4084 - alkaline phosphatase 465 64.53 0 506142..507545 + 467 94313012 - Rmet_4085 - alkaline phosphatase 466 64.00 0 507636..508385 + 249 94313013 - Rmet_4086 - putative signal peptide protein 467 64.01 0 508446..509048 - 200 94313014 - Rmet_4087 - hypothetical protein 468 64.67 0 509045..510697 - 550 94313015 - Rmet_4088 - hypothetical protein 469 65.09 0 510675..511946 - 423 94313016 - Rmet_4089 - hypothetical protein 470 64.98 0 512206..512619 - 137 94313017 - Rmet_4090 - MerR family transcriptional regulator 471 65.80 0 512688..513950 + 420 94313018 - Rmet_4091 - NADH:flavin oxidoreductase/NADH oxidase 472 65.36 0 513979..514896 - 305 94313019 - Rmet_4092 - LysR family transcriptional regulator 473 64.95 0 515077..515775 + 232 94313020 - Rmet_4093 - Pirin-like protein 474 61.70 0 515828..516250 + 140 94313021 - Rmet_4094 - DoxX 475 60.66 0 516301..516666 + 121 94313022 - Rmet_4095 - hypothetical protein 476 64.17 0 516755..517354 + 199 94313023 - Rmet_4096 - TrpR binding protein WrbA 477 63.56 0 517480..518604 - 374 94313024 - Rmet_4097 - porin 478 64.14 0 518700..519410 + 236 94313025 - Rmet_4098 - hypothetical protein 479 65.70 0 519497..520732 + 411 94313026 - Rmet_4099 - L-carnitine dehydratase/bile acid-inducible protein F 480 64.04 0 520741..522378 + 545 94313027 - Rmet_4100 - enoyl-CoA hydratase/isomerase 481 63.73 0 522426..523412 + 328 94313028 - Rmet_4101 - hypothetical protein 482 62.89 0 523512..524147 + 211 94313029 - Rmet_4102 - TetR family transcriptional regulator 483 64.14 0 524155..525264 + 369 94313030 - Rmet_4103 - NADH:flavin oxidoreductase/NADH oxidase 484 65.06 0 525533..527518 - 661 94313031 - Rmet_4104 - sigma-54 dependent trancsriptional regulator 485 63.95 0 527820..529988 + 722 94313032 - Rmet_4105 - acetone carboxylase, beta subunit 486 62.37 0 530000..532324 + 774 94313033 - Rmet_4106 - acetone carboxylase, alpha subunit 487 60.98 0 532348..532857 + 169 94313034 - Rmet_4107 - acetone carboxylase, gamma subunit 488 62.68 0 533037..533813 - 258 94313035 - Rmet_4108 - hypothetical protein 489 64.08 0 533859..534863 - 334 94313036 - Rmet_4109 - hypothetical protein 490 62.60 0 534973..535611 + 212 94313037 - Rmet_4110 - transcriptional regulator 491 62.10 0 535751..536275 + 174 94313038 - Rmet_4111 - MOSC domain-containing protein 492 66.14 0 536275..537228 + 317 94313039 - Rmet_4112 - oxidoreductase FAD-binding region 493 65.74 0 537398..538258 + 286 94313040 - Rmet_4113 - hypothetical protein 494 64.82 0 538295..539161 + 288 94313041 pdxK Rmet_4114 - pyridoxal kinase 495 65.08 0 539166..539417 + 83 94313042 - Rmet_4115 - hypothetical protein 496 64.56 0 539475..540329 - 284 94313043 - Rmet_4116 - phosphatidylserine decarboxylase 497 65.90 0 540499..541794 - 431 94313044 - Rmet_4117 - GntR family transcriptional regulator 498 63.49 0 541873..542124 - 83 94313045 - Rmet_4118 - hypothetical protein 499 64.16 0 542206..542643 + 145 94313046 - Rmet_4119 - hypothetical protein 500 67.75 +1 542842..544224 + 460 94313047 - Rmet_4120 - outer membrane efflux protein 501 65.97 0 544227..545381 + 384 94313048 - Rmet_4121 - secretion protein HlyD 502 61.81 0 545466..546494 - 342 94313049 - Rmet_4122 - integrase catalytic subunit 503 64.39 0 546539..549610 + 1023 94313050 - Rmet_4123 - heavy metal efflux pump CzcA 504 68.27 +1 549712..550086 + 124 94313051 - Rmet_4124 - hypothetical protein 505 62.65 0 550235..550732 + 165 94313052 - Rmet_4125 - hypothetical protein 506 67.14 0 550827..551459 + 210 94313053 - Rmet_4126 - nitrogen fixation protein NifQ, putative 507 66.67 0 551518..551862 - 114 94313054 - Rmet_4127 - hypothetical protein 508 71.51 +2 552077..553006 + 309 94313055 - Rmet_4128 - hypothetical protein 509 70.39 +1 553023..554606 + 527 94313056 - Rmet_4129 - hypothetical protein 510 66.15 0 554633..558094 + 1153 94313057 dnaE2 Rmet_4130 - error-prone DNA polymerase 511 60.40 0 558373..559026 - 217 94313058 - Rmet_4131 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 512 70.11 +1 559200..560333 - 377 94313059 - Rmet_4132 - branched-chain alpha-keto acid dehydrogenase subunit E2 513 69.72 +1 560350..561330 - 326 94313060 - Rmet_4133 - transketolase, central region 514 67.03 0 561323..562426 - 367 94313061 - Rmet_4134 - dehydrogenase, E1 component 515 67.73 +1 562614..563084 - 156 94313062 - Rmet_4135 - hypothetical protein 516 64.51 0 563265..564191 + 308 94313063 - Rmet_4136 - taurine catabolism dioxygenase TauD/TfdA 517 62.38 0 564241..565266 + 341 94313064 - Rmet_4137 - putative periplasmic protein 518 67.26 0 565268..566107 + 279 94313065 - Rmet_4138 - ABC transporter related 519 67.12 0 566146..567024 + 292 94313066 - Rmet_4139 - binding-protein-dependent transport systems inner membrane component 520 67.84 +1 567109..567876 + 255 94313067 - Rmet_4140 - methyltransferase type 11 521 69.11 +1 567910..569136 - 408 94313068 - Rmet_4141 - hypothetical protein 522 68.60 +1 569339..570115 + 258 94313069 - Rmet_4142 - IclR family transcriptional regulator 523 67.15 0 570267..571496 + 409 94313070 - Rmet_4143 - diguanylate cyclase 524 67.84 +1 571539..572393 - 284 94313071 - Rmet_4144 - citrate synthase 525 66.27 0 572390..573634 - 414 94313072 - Rmet_4145 - L-carnitine dehydratase/bile acid-inducible protein F 526 69.12 +1 573627..574646 - 339 94313073 - Rmet_4146 - hypothetical protein 527 70.52 +1 574963..575610 - 215 94313074 - Rmet_4147 - hypothetical protein 528 67.91 +1 575639..577648 - 669 94313075 - Rmet_4148 - squalene cyclase 529 69.14 +1 577724..578572 - 282 94313076 - Rmet_4149 - squalene/phytoene synthase 530 61.58 0 578683..579252 - 189 94313077 - Rmet_4150 - putative signal peptide protein 531 55.39 -2 579337..579540 - 67 94313078 - Rmet_4151 - cold-shock DNA-binding protein family protein 532 60.25 -1 579545..580510 - 321 94313079 - Rmet_4152 - integrase catalytic subunit 533 59.95 -1 580886..581986 - 366 94313080 - Rmet_4153 - IS4 family transposase 534 69.07 +1 582742..583950 + 402 94313081 - Rmet_4154 - IS4 family transposase 535 64.47 0 584239..587100 + 953 94313082 - Rmet_4155 - putative signal peptide protein 536 66.72 0 587114..591220 + 1368 94313083 - Rmet_4156 - tetratricopeptide TPR_4 537 70.13 +1 591272..591820 + 182 94313084 - Rmet_4157 - putative lipoprotein 538 68.24 +1 591844..593307 + 487 94313085 - Rmet_4158 - putative transmembrane protein 539 67.38 +1 593311..594297 + 328 94313086 - Rmet_4159 - putative transmembrane protein 540 64.15 0 594294..595883 + 529 94313087 - Rmet_4160 - glycosyl transferase, group 1 541 60.54 0 595885..597255 + 456 94313088 - Rmet_4161 - putative transmembrane protein 542 64.23 0 597464..598162 + 232 94313089 - Rmet_4162 - two component transcriptional regulator 543 68.28 +1 598155..599825 + 556 94313090 - Rmet_4163 - peptidoglycan-binding LysM 544 67.72 +1 599812..602271 + 819 94313091 - Rmet_4164 - periplasmic sensor signal transduction histidine kinase 545 65.87 0 602516..603391 - 291 94313092 - Rmet_4165 - VacJ-like lipoprotein 546 67.36 +1 603436..606162 - 908 94313093 - Rmet_4166 - hypothetical protein 547 62.86 0 606344..606973 + 209 94313094 - Rmet_4167 - toluene tolerance 548 64.18 0 607077..608243 - 388 94313095 - Rmet_4168 - radical SAM family protein 549 63.76 0 608272..609270 - 332 94313096 ispH Rmet_4169 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 550 65.83 0 609425..610501 + 358 94313097 - Rmet_4170 - NAD-dependent epimerase/dehydratase 551 67.63 +1 610539..611681 - 380 94313098 - Rmet_4171 - glycosyl transferase family protein 552 65.00 0 611688..612704 - 338 94313099 - Rmet_4172 - hypothetical protein 553 69.20 +1 612837..613112 - 91 94313100 - Rmet_4173 - hypothetical protein 554 65.04 0 613175..613420 - 81 94313101 - Rmet_4174 - hypothetical protein 555 66.42 0 613530..614756 + 408 94313102 - Rmet_4175 - N-acylglucosamine 2-epimerase 63.77 MEAN 3.52 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.