version 1.0
Ralstonia metallidurans CH34 chromosome 2, complete sequence - 1..2580084 2313 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 395 68.25 +1 437279..437848 + 189 94312942 - Rmet_4014 - protocatechuate 3,4-dioxygenase, alpha subunit 396 68.36 +1 437853..439325 + 490 94312943 - Rmet_4015 - 3-carboxy-cis,cis-muconate cycloisomerase 397 65.56 0 439359..440537 + 392 94312944 - Rmet_4016 - 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase 398 65.59 0 440541..441470 - 309 94312945 - Rmet_4017 - AraC family transcriptional regulator 399 64.16 0 441598..442794 + 398 94312946 - Rmet_4018 - 4-hydroxybenzoate 3-monooxygenase 400 66.03 0 442961..443740 + 259 94312947 - Rmet_4019 - exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase 401 63.97 0 443865..444161 + 98 94312948 - Rmet_4020 - hypothetical protein 402 62.09 0 444158..444943 - 261 94312949 - Rmet_4021 - NAD(P)H dehydrogenase (quinone) 403 67.22 0 445037..445933 + 298 94312950 - Rmet_4022 - LysR family transcriptional regulator 404 64.95 0 446056..446463 - 135 94312951 - Rmet_4023 - hypothetical protein 405 64.29 0 446504..446839 - 111 94312952 - Rmet_4024 - hypothetical protein 406 67.19 0 446942..448090 + 382 94312953 - Rmet_4025 - major facilitator transporter 407 66.25 0 448155..448874 - 239 94312954 - Rmet_4026 - putative periplasmic ligand-binding sensor protein 408 63.85 0 449007..449963 + 318 94312955 - Rmet_4027 - prolyl aminopeptidase 409 60.67 0 449997..450296 + 99 94312956 - Rmet_4028 - hypothetical protein 410 64.91 0 450360..452858 - 832 94312957 - Rmet_4029 - MscS mechanosensitive ion channel 411 61.52 0 453124..453531 + 135 94312958 - Rmet_4030 - glyoxalase/bleomycin resistance protein/dioxygenase 412 60.00 -1 453528..453917 + 129 94312959 - Rmet_4031 - cytochrome c, class I 413 66.67 0 454002..454319 - 105 94312960 - Rmet_4032 - hypothetical protein 414 67.69 +1 454357..455337 - 326 94312961 - Rmet_4033 - LysR family transcriptional regulator 415 61.31 0 455555..455890 + 111 94312962 - Rmet_4034 - peptidase 416 58.12 -1 455947..456543 + 198 94312963 - Rmet_4035 - phosphoesterase, PA-phosphatase related 417 61.94 0 456614..457396 + 260 94312964 - Rmet_4036 - hypothetical protein 418 59.33 -1 457426..457875 + 149 94312965 - Rmet_4037 - putative signal peptide protein 419 62.85 0 457885..458643 + 252 94312966 - Rmet_4038 - hypothetical protein 420 62.16 0 458666..459331 + 221 94312967 - Rmet_4039 - two component transcriptional regulator 421 60.44 0 459328..460659 + 443 94312968 - Rmet_4040 - periplasmic sensor signal transduction histidine kinase 422 55.56 -2 460688..461119 + 143 94312969 - Rmet_4041 - hypothetical protein 423 61.30 0 461186..461800 - 204 94312970 - Rmet_4042 - resolvase-like protein 424 61.66 0 461861..463078 - 405 94312971 - Rmet_4043 - TniQ 425 64.03 0 463075..463983 - 302 94312972 - Rmet_4044 - TniB 426 64.51 0 463986..465704 - 572 94312973 - Rmet_4045 - integrase catalytic subunit 427 68.80 +1 465782..467656 + 624 94312974 - Rmet_4046 - gamma-glutamyltransferase 2 428 64.65 0 467714..468703 + 329 94312975 - Rmet_4047 - hypothetical protein 429 65.90 0 468703..469221 + 172 94312976 - Rmet_4048 - hypothetical protein 430 67.14 0 469238..469447 - 69 94312977 - Rmet_4049 - hypothetical protein 431 66.87 0 469455..470447 - 330 94312978 - Rmet_4050 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 432 65.18 0 470503..471174 - 223 94312979 - Rmet_4051 - glutathione S-transferase-like protein 433 66.78 0 471271..472173 - 300 94312980 - Rmet_4052 - LysR family transcriptional regulator 434 64.64 0 472186..473271 - 361 94312981 - Rmet_4053 - hypothetical protein 435 70.05 +1 473370..474404 - 344 94312982 - Rmet_4054 - cytochrome C biogenesis protein 436 66.12 0 474397..474948 - 183 94312983 - Rmet_4055 - periplasmic protein thiol 437 68.58 +1 474945..476987 - 680 94312984 - Rmet_4056 - cytochrome c-type biogenesis protein CcmF 438 65.11 0 476984..477433 - 149 94312985 - Rmet_4057 - cytochrome c-type biogenesis protein CcmE 439 68.33 +1 477573..478352 - 259 94312986 - Rmet_4058 - heme exporter protein CcmC 440 68.16 +1 478357..479025 - 222 94312987 - Rmet_4059 - heme exporter protein CcmB 441 69.18 +1 479022..479657 - 211 94312988 - Rmet_4060 - cytochrome c biogenesis protein CcmA 442 61.90 0 479661..480248 - 195 94312989 - Rmet_4061 - periplasmic nitrate reductase subunit NapC 443 63.41 0 480269..480760 - 163 94312990 - Rmet_4062 - periplasmic nitrate reductase subunit NapB 444 63.26 0 480778..483273 - 831 94312991 - Rmet_4063 - nitrate reductase 445 62.42 0 483254..483583 - 109 94312992 - Rmet_4064 - periplasmic nitrate reductase chaperone NapD 446 58.79 -1 483679..483843 - 54 94312993 - Rmet_4065 - periplasmic nitrate reductase NapE 447 63.50 0 483858..484742 + 294 94312994 - Rmet_4066 - methyltransferase type 11 448 66.36 0 484715..485692 - 325 94312995 - Rmet_4067 - twin-arginine translocation pathway signal 449 64.94 0 485742..487481 - 579 94312996 - Rmet_4068 - acyl-CoA synthetase 450 68.20 +1 487560..490940 - 1126 94312997 - Rmet_4069 - carbamoyl-phosphate synthase L chain, ATP-binding 451 67.34 +1 491048..491941 - 297 94312998 - Rmet_4070 - LysR family transcriptional regulator 452 66.16 0 492054..493229 + 391 94312999 - Rmet_4071 - L-carnitine dehydratase/bile acid-inducible protein F 453 62.55 0 493265..493726 + 153 94313000 - Rmet_4072 - hypothetical protein 454 65.47 0 493785..494783 + 332 94313001 - Rmet_4073 - hypothetical protein 455 67.27 0 494826..495986 + 386 94313002 - Rmet_4074 - acyl-CoA dehydrogenase-like protein 456 66.47 0 496166..497161 + 331 94313003 - Rmet_4075 - acyl-CoA dehydrogenase-like protein 457 64.28 0 497224..498018 - 264 94313004 - Rmet_4076 - short-chain dehydrogenase/reductase SDR 458 60.86 0 498208..499551 - 447 94313005 - Rmet_4077 - TRAP transporter solute receptor TAXI family protein 459 63.94 0 499905..501332 - 475 94313006 - Rmet_4078 - major facilitator transporter 460 64.06 0 502667..503050 + 127 94313007 - Rmet_4080 - hypothetical protein 461 60.44 0 503243..503692 - 149 94313008 - Rmet_4081 - hypothetical protein 462 62.24 0 503870..504163 - 97 94313009 - Rmet_4082 - hypothetical protein 463 62.11 0 504259..504543 - 94 94313010 - Rmet_4083 - hypothetical protein 464 64.07 0 504646..506106 + 486 94313011 - Rmet_4084 - alkaline phosphatase 465 64.53 0 506142..507545 + 467 94313012 - Rmet_4085 - alkaline phosphatase 466 64.00 0 507636..508385 + 249 94313013 - Rmet_4086 - putative signal peptide protein 467 64.01 0 508446..509048 - 200 94313014 - Rmet_4087 - hypothetical protein 468 64.67 0 509045..510697 - 550 94313015 - Rmet_4088 - hypothetical protein 469 65.09 0 510675..511946 - 423 94313016 - Rmet_4089 - hypothetical protein 470 64.98 0 512206..512619 - 137 94313017 - Rmet_4090 - MerR family transcriptional regulator 471 65.80 0 512688..513950 + 420 94313018 - Rmet_4091 - NADH:flavin oxidoreductase/NADH oxidase 472 65.36 0 513979..514896 - 305 94313019 - Rmet_4092 - LysR family transcriptional regulator 473 64.95 0 515077..515775 + 232 94313020 - Rmet_4093 - Pirin-like protein 474 61.70 0 515828..516250 + 140 94313021 - Rmet_4094 - DoxX 475 60.66 0 516301..516666 + 121 94313022 - Rmet_4095 - hypothetical protein 476 64.17 0 516755..517354 + 199 94313023 - Rmet_4096 - TrpR binding protein WrbA 477 63.56 0 517480..518604 - 374 94313024 - Rmet_4097 - porin 478 64.14 0 518700..519410 + 236 94313025 - Rmet_4098 - hypothetical protein 479 65.70 0 519497..520732 + 411 94313026 - Rmet_4099 - L-carnitine dehydratase/bile acid-inducible protein F 480 64.04 0 520741..522378 + 545 94313027 - Rmet_4100 - enoyl-CoA hydratase/isomerase 481 63.73 0 522426..523412 + 328 94313028 - Rmet_4101 - hypothetical protein 482 62.89 0 523512..524147 + 211 94313029 - Rmet_4102 - TetR family transcriptional regulator 483 64.14 0 524155..525264 + 369 94313030 - Rmet_4103 - NADH:flavin oxidoreductase/NADH oxidase 484 65.06 0 525533..527518 - 661 94313031 - Rmet_4104 - sigma-54 dependent trancsriptional regulator 485 63.95 0 527820..529988 + 722 94313032 - Rmet_4105 - acetone carboxylase, beta subunit 486 62.37 0 530000..532324 + 774 94313033 - Rmet_4106 - acetone carboxylase, alpha subunit 487 60.98 0 532348..532857 + 169 94313034 - Rmet_4107 - acetone carboxylase, gamma subunit 488 62.68 0 533037..533813 - 258 94313035 - Rmet_4108 - hypothetical protein 489 64.08 0 533859..534863 - 334 94313036 - Rmet_4109 - hypothetical protein 490 62.60 0 534973..535611 + 212 94313037 - Rmet_4110 - transcriptional regulator 491 62.10 0 535751..536275 + 174 94313038 - Rmet_4111 - MOSC domain-containing protein 492 66.14 0 536275..537228 + 317 94313039 - Rmet_4112 - oxidoreductase FAD-binding region 493 65.74 0 537398..538258 + 286 94313040 - Rmet_4113 - hypothetical protein 494 64.82 0 538295..539161 + 288 94313041 pdxK Rmet_4114 - pyridoxal kinase 63.77 MEAN 3.52 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.