IslandPathversion 1.0

IslandPath Analysis: Pyrobaculum islandicum DSM 4184



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 48.97 STD DEV: 7.27
Pyrobaculum islandicum DSM 4184, complete genome - 1..1826402
1978 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1124	 50.35	0	1029595..1030452	-	285	119872644	-	Pisl_1137	-	hypothetical protein
1125	 47.74	0	1030473..1030715	-	80	119872645	-	Pisl_1138	-	hypothetical protein
1126	 54.95	0	1030712..1030984	-	90	119872646	-	Pisl_1139	-	hypothetical protein
1127	 46.49	0	1031229..1031897	-	222	119872647	-	Pisl_1140	-	HhH-GPD family protein
1128	 40.65	-1	1031942..1032433	+	163	119872648	-	Pisl_1141	-	hypothetical protein
1129	 46.07	0	1032703..1033479	+	258	119872649	-	Pisl_1142	-	hypothetical protein
1130	 44.44	0	1033508..1034983	+	491	119872650	-	Pisl_1143	-	carboxypeptidase Taq
1131	 50.70	0	1034980..1035618	-	212	119872651	-	Pisl_1144	-	hypothetical protein
1132	 44.44	0	1035659..1036126	+	155	119872652	-	Pisl_1145	-	phosphopantetheine adenylyltransferase
1133	 47.29	0	1036106..1037416	-	436	119872653	-	Pisl_1146	-	hypothetical protein
1134	 44.54	0	1037521..1037868	-	115	119872654	-	Pisl_1147	-	hypothetical protein
1135	 44.32	0	1038076..1038348	+	90	119872655	-	Pisl_1148	-	hypothetical protein
1136	 46.67	0	1038335..1039159	-	274	119872656	-	Pisl_1149	-	hypothetical protein
1137	 50.19	0	1039304..1040092	+	262	119872657	-	Pisl_1150	-	prephenate dehydratase
1138	 50.26	0	1040055..1042175	-	706	119872658	-	Pisl_1151	-	DEAD/DEAH box helicase domain-containing protein
1139	 53.84	0	1042203..1044245	-	680	119872659	-	Pisl_1152	-	MCM family protein
1140	 55.99	0	1045554..1046621	-	355	119872660	-	Pisl_1153	-	transposase, IS605 OrfB
1141	 52.96	0	1047118..1047489	+	123	119872661	-	Pisl_1154	-	hypothetical protein
1142	 56.22	0	1047507..1047908	+	133	119872662	-	Pisl_1155	-	hypothetical protein
1143	 65.68	+2	1047953..1050493	+	846	119872663	-	Pisl_1156	-	hypothetical protein
1144	 51.59	0	1050555..1052192	+	545	119872664	-	Pisl_1157	-	hypothetical protein
1145	 58.47	+1	1052189..1052554	+	121	119872665	-	Pisl_1158	-	hypothetical protein
1146	 45.59	0	1052551..1053774	+	407	119872666	-	Pisl_1159	-	hypothetical protein
1147	 53.77	0	1053771..1054367	+	198	119872667	-	Pisl_1160	-	hypothetical protein
1148	 53.93	0	1054364..1054897	+	177	119872668	-	Pisl_1161	-	hypothetical protein
1149	 62.42	+1	1054898..1055203	-	101	119872669	-	Pisl_1162	-	hypothetical protein
1150	 67.34	+2	1055224..1055820	-	198	119872670	-	Pisl_1163	-	methyltransferase type 11
1151	 58.44	+1	1057702..1059111	+	469	119872671	-	Pisl_1167	-	radical SAM domain-containing protein
1152	 50.93	0	1059167..1060132	+	321	119872672	-	Pisl_1168	-	aminotransferase, class I and II
1153	 51.30	0	1060145..1061257	+	370	119872673	-	Pisl_1169	-	SufBD protein
1154	 50.16	0	1061491..1062738	-	415	119872674	-	Pisl_1170	-	hypothetical protein
1155	 43.95	0	1062735..1063544	-	269	119872675	-	Pisl_1171	-	hypothetical protein
1156	 47.16	0	1063813..1064094	-	93	119872676	-	Pisl_1172	-	hypothetical protein
1157	 47.17	0	1064166..1064801	+	211	119872677	-	Pisl_1173	-	hypothetical protein
1158	 47.45	0	1064798..1065739	-	313	119872678	-	Pisl_1174	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1159	 45.31	0	1065736..1067688	-	650	119872679	-	Pisl_1175	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
1160	 53.88	0	1067787..1068701	-	304	119872680	-	Pisl_1176	-	hypothetical protein
1161	 61.25	+1	1068840..1069079	+	79	119872681	-	Pisl_1177	-	hypothetical protein
1162	 49.44	0	1069134..1069400	+	88	119872682	-	Pisl_1178	-	hypothetical protein
1163	 51.80	0	1069730..1070980	+	416	119872683	-	Pisl_1179	-	transposase, IS605 OrfB
1164	 44.89	0	1071164..1071760	-	198	119872684	-	Pisl_1180	-	multiple antibiotic resistance (MarC)-related protein
1165	 48.83	0	1071842..1073041	-	399	119872685	-	Pisl_1181	-	hypothetical protein
1166	 39.83	-1	1073077..1073553	+	158	119872686	-	Pisl_1182	-	GCN5-related N-acetyltransferase
1167	 55.49	0	1073674..1074666	+	330	119872687	-	Pisl_1183	-	carbamoyl phosphate synthase small subunit
1168	 56.37	+1	1074653..1077730	+	1025	119872688	carB	Pisl_1184	-	carbamoyl phosphate synthase large subunit
1169	 45.99	0	1077724..1078521	+	265	119872689	-	Pisl_1185	-	alpha-L-glutamate ligase
1170	 50.27	0	1078570..1079484	-	304	119872690	-	Pisl_1186	-	AIR synthase-like protein
1171	 49.45	0	1079545..1080183	+	212	119872691	-	Pisl_1187	-	hypothetical protein
1172	 51.05	0	1080180..1081325	+	381	119872692	-	Pisl_1188	-	extracellular solute-binding protein
1173	 54.21	0	1082206..1082727	+	173	119872693	-	Pisl_1190	-	molybdenum cofactor synthesis domain-containing protein
1174	 50.66	0	1082724..1083254	+	176	119872694	-	Pisl_1191	-	hypothetical protein
1175	 46.54	0	1083237..1083872	-	211	119872695	-	Pisl_1192	-	abortive infection protein
1176	 42.17	0	1084194..1084691	+	165	119872696	-	Pisl_1193	-	hypothetical protein
1177	 43.69	0	1084638..1085255	-	205	119872697	-	Pisl_1194	-	dTMP kinase
1178	 48.54	0	1085286..1086725	-	479	119872698	-	Pisl_1195	-	FAD dependent oxidoreductase
1179	 49.05	0	1086843..1087847	+	334	119872699	-	Pisl_1196	-	adenylosuccinate synthetase
1180	 45.63	0	1087844..1089055	+	403	119872700	-	Pisl_1197	-	adenylosuccinate lyase
1181	 46.11	0	1089046..1089624	+	192	119872701	hisH	Pisl_1198	-	imidazole glycerol phosphate synthase subunit HisH
1182	 63.61	+2	1089734..1090093	-	119	119872702	-	Pisl_1199	-	hypothetical protein
1183	 47.32	0	1090409..1091080	+	223	119872703	-	Pisl_1200	-	ribose 5-phosphate isomerase
1184	 42.55	0	1091077..1091781	-	234	119872704	-	Pisl_1201	-	hypothetical protein
1185	 50.29	0	1091817..1092671	-	284	119872705	-	Pisl_1202	-	thiamine monophosphate kinase-like protein
1186	 43.24	0	1092671..1093003	-	110	119872706	-	Pisl_1203	-	hypothetical protein
1187	 46.23	0	1093325..1093735	-	136	119872707	-	Pisl_1204	-	hypothetical protein
1188	 48.37	0	1093759..1094496	-	245	119872708	-	Pisl_1205	-	hypothetical protein
1189	 43.08	0	1094538..1095542	+	334	119872709	-	Pisl_1206	-	polyprenyl synthetase
1190	 47.70	0	1095542..1096258	+	238	119872710	-	Pisl_1207	-	aspartate/glutamate/uridylate kinase
1191	 45.50	0	1096255..1096821	-	188	119872711	-	Pisl_1208	-	hypothetical protein
1192	 43.51	0	1096851..1097135	-	94	119872712	-	Pisl_1209	-	hypothetical protein
1193	 42.23	0	1097164..1097691	+	175	119872713	-	Pisl_1210	-	ZPR1-like zinc finger protein
1194	 46.53	0	1097798..1098244	-	148	119872714	-	Pisl_1211	-	phosphoribosyl-AMP cyclohydrolase
1195	 44.54	0	1098245..1099252	+	335	119872715	-	Pisl_1212	-	aminotransferase, class I and II
1196	 44.52	0	1099291..1100139	+	282	119872716	hisG	Pisl_1213	-	ATP phosphoribosyltransferase
1197	 57.19	+1	1100143..1100427	-	94	119872717	-	Pisl_1214	-	phosphoribosyl-ATP pyrophosphohydrolase
1198	 60.99	+1	1100424..1101533	-	369	119872718	-	Pisl_1215	-	histidinol dehydrogenase
1199	 59.46	+1	1101530..1102306	-	258	119872719	-	Pisl_1216	-	imidazoleglycerol phosphate synthase, cyclase subunit
1200	 60.28	+1	1102333..1102896	+	187	119872720	-	Pisl_1217	-	imidazoleglycerol-phosphate dehydratase
1201	 59.45	+1	1102893..1103585	+	230	119872721	-	Pisl_1218	-	histidine biosynthesis protein
1202	 51.48	0	1103575..1105029	-	484	119872722	-	Pisl_1219	-	hypothetical protein
1203	 49.68	0	1106170..1107423	+	417	119872723	-	Pisl_1221	-	glutamyl-tRNA(Gln) amidotransferase subunit D
1204	 49.81	0	1107420..1107947	+	175	119872724	-	Pisl_1222	-	metal dependent phosphohydrolase
1205	 47.28	0	1108299..1108592	+	97	119872725	-	Pisl_1223	-	hypothetical protein
1206	 42.71	0	1109197..1109580	-	127	119872726	-	Pisl_1225	-	signal-transduction protein
1207	 48.33	0	1109677..1111536	+	619	119872727	-	Pisl_1226	-	aldehyde ferredoxin oxidoreductase (aor)
1208	 53.76	0	1111755..1112978	-	407	119872728	-	Pisl_1227	-	transposase, IS605 OrfB
1209	 59.17	+1	1113328..1113714	-	128	119872729	-	Pisl_1228	-	hypothetical protein
1210	 48.48	0	1113811..1114206	-	131	119872730	-	Pisl_1229	-	dinitrogenase iron-molybdenum cofactor biosynthesis protein
1211	 45.02	0	1114395..1114916	+	173	119872731	-	Pisl_1230	-	pyruvate/ketoisovalerate oxidoreductase, gamma subunit
1212	 43.59	0	1114913..1115224	+	103	119872732	-	Pisl_1231	-	pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
1213	 47.12	0	1115221..1116402	+	393	119872733	-	Pisl_1232	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
1214	 46.56	0	1116399..1117343	+	314	119872734	-	Pisl_1233	-	thiamine pyrophosphate binding domain-containing protein
1215	 56.96	+1	1117542..1119488	+	648	119872735	-	Pisl_1234	-	hypothetical protein
1216	 38.60	-1	1119535..1119876	+	113	119872736	-	Pisl_1235	-	hypothetical protein
1217	 48.27	0	1120062..1121480	+	472	119872737	-	Pisl_1236	-	glycoside hydrolase family protein
1218	 47.02	0	1121480..1122721	+	413	119872738	-	Pisl_1237	-	major facilitator transporter
1219	 46.69	0	1122760..1123755	+	331	119872739	-	Pisl_1238	-	pyridoxal-5'-phosphate-dependent enzyme, beta subunit
1220	 43.78	0	1123748..1124446	-	232	119872740	-	Pisl_1239	-	hypothetical protein
1221	 54.86	0	1124772..1125152	-	126	119872741	-	Pisl_1240	-	hypothetical protein
1222	 51.06	0	1125917..1126294	+	125	119872742	-	Pisl_1241	-	hypothetical protein
1223	 54.69	0	1126487..1127371	-	294	119872743	-	Pisl_1242	-	Fis family transcriptional regulator
48.97	MEAN

7.27	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.