IslandPathversion 1.0

IslandPath Analysis: Pyrobaculum islandicum DSM 4184



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 48.97 STD DEV: 7.27
Pyrobaculum islandicum DSM 4184, complete genome - 1..1826402
1978 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1102	 49.52	0	1013610..1015364	+	584	119872622	-	Pisl_1115	-	ATP-dependent DNA ligase
1103	 46.34	0	1015352..1015843	-	163	119872623	-	Pisl_1116	-	hypothetical protein
1104	 48.26	0	1015885..1016802	+	305	119872624	-	Pisl_1117	-	ribokinase-like domain-containing protein
1105	 45.91	0	1016822..1017163	+	113	119872625	-	Pisl_1118	-	hypothetical protein
1106	 45.28	0	1017160..1017837	+	225	119872626	-	Pisl_1119	-	nucleotidyl transferase
1107	 44.63	0	1017868..1018593	+	241	119872627	-	Pisl_1120	-	hypothetical protein
1108	 42.34	0	1018590..1019144	+	184	119872628	-	Pisl_1121	-	hypothetical protein
1109	 47.04	0	1019122..1019493	-	123	119872629	-	Pisl_1122	-	hypothetical protein
1110	 49.34	0	1019519..1020580	+	353	119872630	-	Pisl_1123	-	hypothetical protein
1111	 43.73	0	1020943..1021221	-	92	119872631	-	Pisl_1124	-	hypothetical protein
1112	 49.28	0	1021197..1022093	-	298	119872632	-	Pisl_1125	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
1113	 40.30	-1	1022087..1022488	-	133	119872633	-	Pisl_1126	-	hypothetical protein
1114	 43.91	0	1022814..1023125	+	103	119872634	-	Pisl_1127	-	50S ribosomal protein L14e
1115	 48.43	0	1023122..1024108	+	328	119872635	-	Pisl_1128	-	H/ACA RNA-protein complex component Cbf5p
1116	 49.32	0	1024149..1024442	+	97	119872636	-	Pisl_1129	-	hypothetical protein
1117	 46.31	0	1024439..1024939	+	166	119872637	-	Pisl_1130	-	hypothetical protein
1118	 41.34	-1	1025299..1025760	+	153	119872638	-	Pisl_1131	-	hypothetical protein
1119	 47.65	0	1025879..1026814	+	311	119872639	-	Pisl_1132	-	oxidoreductase domain-containing protein
1120	 45.25	0	1027068..1027604	+	178	119872640	-	Pisl_1133	-	hypothetical protein
1121	 47.31	0	1027591..1028184	-	197	119872641	-	Pisl_1134	-	abortive infection protein
1122	 48.45	0	1028202..1028684	+	160	119872642	-	Pisl_1135	-	hypothetical protein
1123	 45.35	0	1028665..1029513	-	282	119872643	-	Pisl_1136	-	competence damage-inducible protein A
1124	 50.35	0	1029595..1030452	-	285	119872644	-	Pisl_1137	-	hypothetical protein
1125	 47.74	0	1030473..1030715	-	80	119872645	-	Pisl_1138	-	hypothetical protein
1126	 54.95	0	1030712..1030984	-	90	119872646	-	Pisl_1139	-	hypothetical protein
1127	 46.49	0	1031229..1031897	-	222	119872647	-	Pisl_1140	-	HhH-GPD family protein
1128	 40.65	-1	1031942..1032433	+	163	119872648	-	Pisl_1141	-	hypothetical protein
1129	 46.07	0	1032703..1033479	+	258	119872649	-	Pisl_1142	-	hypothetical protein
1130	 44.44	0	1033508..1034983	+	491	119872650	-	Pisl_1143	-	carboxypeptidase Taq
1131	 50.70	0	1034980..1035618	-	212	119872651	-	Pisl_1144	-	hypothetical protein
1132	 44.44	0	1035659..1036126	+	155	119872652	-	Pisl_1145	-	phosphopantetheine adenylyltransferase
1133	 47.29	0	1036106..1037416	-	436	119872653	-	Pisl_1146	-	hypothetical protein
1134	 44.54	0	1037521..1037868	-	115	119872654	-	Pisl_1147	-	hypothetical protein
1135	 44.32	0	1038076..1038348	+	90	119872655	-	Pisl_1148	-	hypothetical protein
1136	 46.67	0	1038335..1039159	-	274	119872656	-	Pisl_1149	-	hypothetical protein
1137	 50.19	0	1039304..1040092	+	262	119872657	-	Pisl_1150	-	prephenate dehydratase
1138	 50.26	0	1040055..1042175	-	706	119872658	-	Pisl_1151	-	DEAD/DEAH box helicase domain-containing protein
1139	 53.84	0	1042203..1044245	-	680	119872659	-	Pisl_1152	-	MCM family protein
1140	 55.99	0	1045554..1046621	-	355	119872660	-	Pisl_1153	-	transposase, IS605 OrfB
1141	 52.96	0	1047118..1047489	+	123	119872661	-	Pisl_1154	-	hypothetical protein
1142	 56.22	0	1047507..1047908	+	133	119872662	-	Pisl_1155	-	hypothetical protein
1143	 65.68	+2	1047953..1050493	+	846	119872663	-	Pisl_1156	-	hypothetical protein
1144	 51.59	0	1050555..1052192	+	545	119872664	-	Pisl_1157	-	hypothetical protein
1145	 58.47	+1	1052189..1052554	+	121	119872665	-	Pisl_1158	-	hypothetical protein
1146	 45.59	0	1052551..1053774	+	407	119872666	-	Pisl_1159	-	hypothetical protein
1147	 53.77	0	1053771..1054367	+	198	119872667	-	Pisl_1160	-	hypothetical protein
1148	 53.93	0	1054364..1054897	+	177	119872668	-	Pisl_1161	-	hypothetical protein
1149	 62.42	+1	1054898..1055203	-	101	119872669	-	Pisl_1162	-	hypothetical protein
1150	 67.34	+2	1055224..1055820	-	198	119872670	-	Pisl_1163	-	methyltransferase type 11
1151	 58.44	+1	1057702..1059111	+	469	119872671	-	Pisl_1167	-	radical SAM domain-containing protein
1152	 50.93	0	1059167..1060132	+	321	119872672	-	Pisl_1168	-	aminotransferase, class I and II
1153	 51.30	0	1060145..1061257	+	370	119872673	-	Pisl_1169	-	SufBD protein
1154	 50.16	0	1061491..1062738	-	415	119872674	-	Pisl_1170	-	hypothetical protein
1155	 43.95	0	1062735..1063544	-	269	119872675	-	Pisl_1171	-	hypothetical protein
1156	 47.16	0	1063813..1064094	-	93	119872676	-	Pisl_1172	-	hypothetical protein
1157	 47.17	0	1064166..1064801	+	211	119872677	-	Pisl_1173	-	hypothetical protein
1158	 47.45	0	1064798..1065739	-	313	119872678	-	Pisl_1174	-	2-oxoglutarate ferredoxin oxidoreductase subunit beta
1159	 45.31	0	1065736..1067688	-	650	119872679	-	Pisl_1175	-	pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
1160	 53.88	0	1067787..1068701	-	304	119872680	-	Pisl_1176	-	hypothetical protein
1161	 61.25	+1	1068840..1069079	+	79	119872681	-	Pisl_1177	-	hypothetical protein
1162	 49.44	0	1069134..1069400	+	88	119872682	-	Pisl_1178	-	hypothetical protein
1163	 51.80	0	1069730..1070980	+	416	119872683	-	Pisl_1179	-	transposase, IS605 OrfB
1164	 44.89	0	1071164..1071760	-	198	119872684	-	Pisl_1180	-	multiple antibiotic resistance (MarC)-related protein
1165	 48.83	0	1071842..1073041	-	399	119872685	-	Pisl_1181	-	hypothetical protein
1166	 39.83	-1	1073077..1073553	+	158	119872686	-	Pisl_1182	-	GCN5-related N-acetyltransferase
1167	 55.49	0	1073674..1074666	+	330	119872687	-	Pisl_1183	-	carbamoyl phosphate synthase small subunit
1168	 56.37	+1	1074653..1077730	+	1025	119872688	carB	Pisl_1184	-	carbamoyl phosphate synthase large subunit
1169	 45.99	0	1077724..1078521	+	265	119872689	-	Pisl_1185	-	alpha-L-glutamate ligase
1170	 50.27	0	1078570..1079484	-	304	119872690	-	Pisl_1186	-	AIR synthase-like protein
1171	 49.45	0	1079545..1080183	+	212	119872691	-	Pisl_1187	-	hypothetical protein
1172	 51.05	0	1080180..1081325	+	381	119872692	-	Pisl_1188	-	extracellular solute-binding protein
1173	 54.21	0	1082206..1082727	+	173	119872693	-	Pisl_1190	-	molybdenum cofactor synthesis domain-containing protein
1174	 50.66	0	1082724..1083254	+	176	119872694	-	Pisl_1191	-	hypothetical protein
1175	 46.54	0	1083237..1083872	-	211	119872695	-	Pisl_1192	-	abortive infection protein
1176	 42.17	0	1084194..1084691	+	165	119872696	-	Pisl_1193	-	hypothetical protein
1177	 43.69	0	1084638..1085255	-	205	119872697	-	Pisl_1194	-	dTMP kinase
1178	 48.54	0	1085286..1086725	-	479	119872698	-	Pisl_1195	-	FAD dependent oxidoreductase
1179	 49.05	0	1086843..1087847	+	334	119872699	-	Pisl_1196	-	adenylosuccinate synthetase
1180	 45.63	0	1087844..1089055	+	403	119872700	-	Pisl_1197	-	adenylosuccinate lyase
1181	 46.11	0	1089046..1089624	+	192	119872701	hisH	Pisl_1198	-	imidazole glycerol phosphate synthase subunit HisH
1182	 63.61	+2	1089734..1090093	-	119	119872702	-	Pisl_1199	-	hypothetical protein
1183	 47.32	0	1090409..1091080	+	223	119872703	-	Pisl_1200	-	ribose 5-phosphate isomerase
1184	 42.55	0	1091077..1091781	-	234	119872704	-	Pisl_1201	-	hypothetical protein
1185	 50.29	0	1091817..1092671	-	284	119872705	-	Pisl_1202	-	thiamine monophosphate kinase-like protein
1186	 43.24	0	1092671..1093003	-	110	119872706	-	Pisl_1203	-	hypothetical protein
1187	 46.23	0	1093325..1093735	-	136	119872707	-	Pisl_1204	-	hypothetical protein
1188	 48.37	0	1093759..1094496	-	245	119872708	-	Pisl_1205	-	hypothetical protein
1189	 43.08	0	1094538..1095542	+	334	119872709	-	Pisl_1206	-	polyprenyl synthetase
1190	 47.70	0	1095542..1096258	+	238	119872710	-	Pisl_1207	-	aspartate/glutamate/uridylate kinase
1191	 45.50	0	1096255..1096821	-	188	119872711	-	Pisl_1208	-	hypothetical protein
1192	 43.51	0	1096851..1097135	-	94	119872712	-	Pisl_1209	-	hypothetical protein
1193	 42.23	0	1097164..1097691	+	175	119872713	-	Pisl_1210	-	ZPR1-like zinc finger protein
1194	 46.53	0	1097798..1098244	-	148	119872714	-	Pisl_1211	-	phosphoribosyl-AMP cyclohydrolase
1195	 44.54	0	1098245..1099252	+	335	119872715	-	Pisl_1212	-	aminotransferase, class I and II
1196	 44.52	0	1099291..1100139	+	282	119872716	hisG	Pisl_1213	-	ATP phosphoribosyltransferase
1197	 57.19	+1	1100143..1100427	-	94	119872717	-	Pisl_1214	-	phosphoribosyl-ATP pyrophosphohydrolase
1198	 60.99	+1	1100424..1101533	-	369	119872718	-	Pisl_1215	-	histidinol dehydrogenase
1199	 59.46	+1	1101530..1102306	-	258	119872719	-	Pisl_1216	-	imidazoleglycerol phosphate synthase, cyclase subunit
1200	 60.28	+1	1102333..1102896	+	187	119872720	-	Pisl_1217	-	imidazoleglycerol-phosphate dehydratase
1201	 59.45	+1	1102893..1103585	+	230	119872721	-	Pisl_1218	-	histidine biosynthesis protein
48.97	MEAN

7.27	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.