IslandPath Analysis: Pyrococcus furiosus DSM 3638



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 40.88   STD DEV: 3.74
Pyrococcus furiosus DSM 3638, complete genome - 1..1908256
2125 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
766	 44.38	0	738843..739367	+	174	18977114	-	PF0742	-	putative ferritin
767	 35.80	-1	739644..739886	+	80	18977115	-	PF0743	-	hypothetical protein
768	 34.97	-1	740116..741705	-	529	18977116	-	PF0744	-	ABC transporter
769	 38.99	0	742393..743028	-	211	18977117	-	PF0745	-	hypothetical protein
770	 40.49	0	743091..743900	+	269	18977118	-	PF0746	-	hypothetical protein
771	 40.48	0	743892..744968	-	358	18977119	-	PF0747	-	putative proline dipeptidase
772	 36.67	-1	745238..745387	+	49	18977120	-	PF0748	-	hypothetical protein
773	 40.17	0	745558..745674	+	38	18977121	-	PF0749	-	hypothetical protein
774	 46.43	+1	745739..746326	+	195	18977122	-	PF0750	-	putative NADH oxidase
775	 41.77	0	746296..747540	-	414	18977123	-	PF0751	-	flavoprotein
776	 37.56	0	747589..748038	-	149	18977124	-	PF0752	-	thioredoxin peroxidase
777	 42.10	0	748043..748909	-	288	18977125	-	PF0753	-	2-oxoacid ferredoxin oxidoreductase subunit beta
778	 41.16	0	748906..750618	-	570	18977126	-	PF0754	-	2-keto acid:ferredoxin oxidoreductase subunit alpha
779	 38.99	0	750669..752189	-	506	18977127	-	PF0755	-	non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase
780	 44.59	0	752343..753044	+	233	18977128	-	PF0756	-	transposase
781	 46.83	+1	753017..753142	-	41	18977129	-	PF0757	-	hypothetical protein
782	 43.59	0	753118..753390	-	90	18977130	-	PF0758	-	hypothetical protein
783	 42.45	0	753633..753950	+	105	18977131	-	PF0759	-	hypothetical protein
784	 45.06	+1	753911..754933	+	340	18977132	-	PF0760	-	hypothetical protein
785	 46.06	+1	755060..755389	-	109	18977133	-	PF0761	-	hypothetical protein
786	 39.89	0	755454..755819	-	121	33359505	-	PF0762	-	hypothetical protein
787	 42.36	0	755893..756036	+	47	18977135	-	PF0763	-	hypothetical protein
788	 44.98	+1	756033..757328	-	431	18977136	-	PF0764	-	DEXX-box atpase
789	 47.13	+1	757388..758677	-	429	18977137	-	PF0765	-	NDP-sugar dehydrogenase
790	 47.21	+1	758735..759685	-	316	18977138	-	PF0766	-	putative dehydrogenase
791	 46.03	+1	759691..760785	-	364	18977139	-	PF0767	-	pleiotropic regulatory protein degT
792	 45.53	+1	760795..761409	-	204	18977140	-	PF0768	-	acetyl / acyl transferase related protein
793	 37.46	0	761479..762375	-	298	18977141	-	PF0769	-	glycosyl transferase
794	 42.78	0	762368..763246	-	292	18977142	-	PF0770	-	glucose-1-phosphate uridylyltransferase
795	 43.82	0	763243..764415	-	390	18977143	-	PF0771	-	NDP-sugar dehydrogenase
796	 39.85	0	764538..764936	+	132	18977144	-	PF0772	-	hypothetical protein
797	 40.62	0	765121..765216	-	31	18977145	-	PF0773	-	hypothetical protein
798	 37.54	0	765189..765497	-	102	18977146	-	PF0774	-	hypothetical protein
799	 38.27	0	765537..765860	+	107	18977147	-	PF0775	-	hypothetical protein
800	 39.14	0	765933..766259	+	108	33359506	-	PF0776	-	hypothetical protein
801	 49.85	+2	766356..767003	+	215	18977149	-	PF0777	-	hypothetical protein
802	 38.81	0	766956..767174	-	72	33359507	-	PF0776.1n	-	hypothetical protein
803	 33.33	-2	767181..767360	-	59	18977150	-	PF0778	-	hypothetical protein
804	 43.70	0	767357..767491	-	44	18977151	-	PF0779	-	hypothetical protein
805	 44.59	0	767568..768269	+	233	18977152	-	PF0780	-	transposase
806	 39.57	0	768446..768862	+	138	18977153	-	PF0781	-	hypothetical protein
807	 43.03	0	769195..769524	+	109	18977154	-	PF0782	-	hypothetical protein
808	 52.13	+2	769551..770768	+	405	18977155	-	PF0783	-	hypothetical protein
809	 41.96	0	770736..771326	-	196	18977156	-	PF0784	-	hypothetical protein
810	 44.59	0	771392..772093	+	233	18977157	-	PF0785	-	transposase
811	 39.18	0	772203..772664	-	153	33359509	-	PF0785.2n	-	hypothetical protein
812	 42.70	0	772786..773244	+	152	33359510	-	PF0785.3n	-	hypothetical protein
813	 44.27	0	772789..773660	+	290	33359508	-	PF0786	-	transposase
814	 37.44	0	773641..774030	-	129	18977159	-	PF0787	-	hypothetical protein
815	 34.70	-1	774027..774686	-	219	18977160	-	PF0788	-	glycosyl transferase
816	 33.97	-1	774691..775161	-	156	18977161	-	PF0789	-	hypothetical protein
817	 34.75	-1	775174..776934	-	586	18977162	-	PF0790	-	hypothetical protein
818	 37.01	-1	776880..778049	-	389	18977163	-	PF0791	-	hypothetical protein
819	 35.44	-1	778050..779660	-	536	18977164	-	PF0792	-	hypothetical protein
820	 33.33	-2	779679..779924	-	81	18977165	-	PF0793	-	hypothetical protein
821	 36.86	-1	779986..781062	-	358	18977166	-	PF0794	-	UDP-n-acetylglucosamine 2-epimerase
822	 34.83	-1	781059..782261	-	400	18977167	-	PF0795	-	capsular polysaccharide biosynthesis protein
823	 36.53	-1	782274..782774	-	166	18977168	-	PF0796	-	galactoside o-acetyltransferase
824	 33.33	-2	782783..783826	-	347	18977169	-	PF0797	-	hypothetical protein
825	 35.75	-1	783839..784747	-	302	18977170	-	PF0798	-	glycosyl transferase
826	 39.52	0	784759..784968	-	69	33359511	-	PF0799	-	hypothetical protein
827	 43.92	0	785140..785879	+	246	33359512	-	PF0800	-	transposase
828	 43.40	0	785149..785595	+	148	18977173	-	PF0801	-	hypothetical protein
829	 43.46	0	786027..786431	-	134	18977174	-	PF0802	-	hypothetical protein
830	 47.79	+1	786428..787672	-	414	18977175	-	PF0803	-	hypothetical protein
831	 49.35	+2	787669..788598	-	309	18977176	-	PF0804	-	methanol dehydrogenase regulator
832	 43.42	0	788600..788956	-	118	18977177	-	PF0805	-	hypothetical protein
833	 44.08	0	788944..789585	-	213	18977178	-	PF0806	-	hypothetical protein
834	 43.10	0	789582..791270	-	562	18977179	-	PF0807	-	hypothetical protein
835	 45.59	+1	791326..792084	+	252	18977180	-	PF0808	-	hypothetical protein
836	 44.03	0	792075..792317	+	80	18977181	-	PF0809	-	hypothetical protein
837	 45.35	+1	792435..793424	+	329	18977182	-	PF0810	-	hypothetical protein
838	 40.36	0	793480..793920	-	146	18977183	-	PF0811	-	hypothetical protein
839	 36.21	-1	794106..794522	-	138	18977184	-	PF0812	-	hypothetical protein
840	 38.53	0	794519..794749	-	76	18977185	-	PF0813	-	hypothetical protein
841	 35.38	-1	794974..795462	+	162	18977186	-	PF0814	-	hypothetical protein
842	 34.11	-1	795782..795910	+	42	18977187	-	PF0815	-	hypothetical protein
843	 47.97	+1	796206..797018	-	270	18977188	-	PF0816	-	hypothetical protein
844	 44.59	0	797137..797838	-	233	18977189	-	PF0817	-	transposase
845	 45.34	+1	798141..799148	-	335	18977190	-	PF0818	-	aminohydrolase
846	 48.81	+2	799201..799452	-	83	18977191	-	PF0819	-	50S ribosomal protein L14e
847	 46.63	+1	799453..800031	-	192	18977192	-	PF0820	-	cytidylate kinase
848	 49.63	+2	800043..800312	-	89	18977193	rpl34e	PF0821	-	50S ribosomal protein L34e
849	 42.68	0	800391..800636	+	81	18977194	-	PF0822	-	hypothetical protein
850	 43.36	0	800694..802109	+	471	18977195	-	PF0823	-	hypothetical protein
851	 45.42	+1	802087..803559	+	490	18977196	-	PF0824	-	hypothetical protein
852	 45.76	+1	803543..805393	-	616	18977197	-	PF0825	-	prolyl endopeptidase
853	 41.73	0	805426..806532	-	368	18977198	-	PF0826	-	putative transport membrane protein
854	 42.76	0	806556..807785	-	409	18977199	-	PF0827	-	putative RNA methyltransferase
855	 43.77	0	807782..808471	-	229	18977200	-	PF0828	-	n-type ATP pyrophosphatase superfamily protein
856	 50.95	+2	808520..808729	-	69	33359513	-	PF0829	-	hypothetical protein
857	 42.12	0	808750..809136	-	128	18977202	-	PF0830	-	hypothetical protein
858	 41.44	0	809133..809909	-	258	18977203	-	PF0831	-	hypothetical protein
859	 46.10	+1	810182..810322	-	46	18977204	-	PF0832	-	hypothetical protein
860	 43.02	0	810368..810625	+	85	18977205	-	PF0833	-	low temperature requirement C - like protein
861	 43.92	0	810684..811382	-	232	18977206	-	PF0834	-	hypothetical protein
862	 43.76	0	811379..812260	-	293	18977207	-	PF0835	-	daunorubicin resistance ATP-binding protein drrA
863	 40.17	0	812605..813072	+	155	18977208	-	PF0836	-	cobalamin synthase
864	 38.33	0	813182..813301	+	39	18977209	-	PF0837	-	cobalamin (5'-phosphate) synthase, c-terminal fragment
865	 38.49	0	813298..813549	+	83	18977210	-	PF0838	-	hypothetical protein
40.88	MEAN

3.74	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.