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Pyrobaculum arsenaticum DSM 13514, complete genome - 1..2121076 2299 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2200 61.02 +1 2034506..2035726 - 406 145592466 - Pars_2272 - NADH dehydrogenase (ubiquinone) 2201 56.09 0 2035719..2036153 - 144 145592467 - Pars_2273 - NADH-quinone oxidoreductase, B subunit 2202 60.06 0 2036244..2036591 - 115 145592468 - Pars_2274 - NADH-ubiquinone oxidoreductase subunit 2203 61.11 +1 2036576..2037547 - 323 145592469 - Pars_2275 - respiratory-chain NADH dehydrogenase, subunit 1 2204 58.15 0 2037640..2038038 - 132 145592470 - Pars_2276 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2205 58.98 0 2038038..2039039 - 333 145592471 - Pars_2277 - thiamine pyrophosphate binding domain-containing protein 2206 57.65 0 2039110..2040318 - 402 145592472 - Pars_2278 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2207 56.98 0 2040315..2041253 - 312 145592473 - Pars_2279 - pyruvate/ketoisovalerate oxidoreductase, gamma subunit 2208 62.08 +1 2041338..2042471 - 377 145592474 - Pars_2280 - NADH/ubiquinone/plastoquinone (complex I) 2209 64.03 +1 2042459..2044087 - 542 145592475 - Pars_2281 - NADH/ubiquinone/plastoquinone (complex I) 2210 60.72 +1 2044084..2045361 - 425 145592476 - Pars_2282 - NADH/ubiquinone/plastoquinone (complex I) 2211 61.60 +1 2045354..2045590 - 78 145592477 - Pars_2283 - hypothetical protein 2212 54.98 0 2045587..2045988 - 133 145592478 - Pars_2284 - hypothetical protein 2213 54.27 0 2046171..2048018 + 615 145592479 - Pars_2285 - aldehyde ferredoxin oxidoreductase 2214 54.46 0 2048054..2048782 + 242 145592480 - Pars_2286 - ATP-NAD/AcoX kinase 2215 58.48 0 2048779..2049120 + 113 145592481 - Pars_2287 - PilT domain-containing protein 2216 58.44 0 2049108..2049824 - 238 145592482 - Pars_2288 - hypothetical protein 2217 58.81 0 2049817..2050287 - 156 145592483 - Pars_2289 - hypothetical protein 2218 56.93 0 2050333..2051451 + 372 145592484 - Pars_2290 - tyrosyl-tRNA synthetase 2219 60.72 +1 2051416..2052492 - 358 145592485 - Pars_2291 - hypothetical protein 2220 52.12 0 2052504..2053967 + 487 145592486 - Pars_2292 - metal dependent phosphohydrolase 2221 52.00 0 2053956..2054255 - 99 145592487 - Pars_2293 - hypothetical protein 2222 57.64 0 2054322..2055185 + 287 145592488 - Pars_2294 - hypothetical protein 2223 60.06 0 2055182..2056225 - 347 145592489 - Pars_2295 - Fis family transcriptional regulator 2224 55.20 0 2056236..2056610 - 124 145592490 - Pars_2296 - hypothetical protein 2225 55.15 0 2056831..2057325 + 164 145592491 - Pars_2297 - hypothetical protein 2226 55.46 0 2057319..2057675 + 118 145592492 - Pars_2298 - transcriptional regulator, TrmB 2227 53.50 0 2057650..2058135 - 161 145592493 - Pars_2299 - hypothetical protein 2228 58.23 0 2058277..2058774 + 165 145592494 - Pars_2300 - hypothetical protein 2229 55.84 0 2058753..2059343 - 196 145592495 - Pars_2301 - hypothetical protein 2230 56.88 0 2059356..2060234 + 292 145592496 - Pars_2302 - alpha-L-glutamate ligase 2231 58.82 0 2060431..2060583 - 50 145592497 - Pars_2303 - paREP10 2232 52.06 0 2060625..2061302 - 225 145592498 - Pars_2304 - hypothetical protein 2233 57.69 0 2061359..2061937 + 192 145592499 - Pars_2305 - phage SPO1 DNA polymerase-related protein 2234 53.38 0 2062248..2063135 + 295 145592500 - Pars_2306 - hypothetical protein 2235 56.67 0 2063132..2064742 + 536 145592501 - Pars_2307 - hypothetical protein 2236 55.34 0 2064772..2065239 + 155 145592502 - Pars_2308 - hypothetical protein 2237 56.93 0 2065236..2066057 - 273 145592503 - Pars_2309 - protein of unknown function Met10 2238 55.29 0 2066247..2067248 + 333 145592504 radA Pars_2310 - DNA repair and recombination protein RadA 2239 60.22 0 2067270..2067812 + 180 145592505 - Pars_2311 - flavin reductase domain-containing protein 2240 60.74 +1 2067815..2068405 - 196 145592506 - Pars_2312 - hypothetical protein 2241 55.28 0 2068452..2070050 + 532 145592507 - Pars_2313 - radical SAM domain-containing protein 2242 51.68 0 2070033..2070479 - 148 145592508 - Pars_2314 - hypothetical protein 2243 53.97 0 2070525..2070839 + 104 145592509 - Pars_2315 - zinc finger C2H2-type domain-containing protein 2244 52.12 0 2070839..2071333 + 164 145592510 - Pars_2316 - hypothetical protein 2245 44.67 -1 2071627..2071917 + 96 145592511 - Pars_2317 - H+-transporting ATP synthase subunit F (atpF) 2246 46.21 -1 2071951..2072517 + 188 145592512 - Pars_2318 - H+-transporting two-sector ATPase, E subunit 2247 56.85 0 2072514..2074295 + 593 145592513 - Pars_2319 - V-type ATP synthase subunit A 2248 52.19 0 2074325..2074552 + 75 145592514 rpoH Pars_2320 - DNA-directed RNA polymerase subunit H 2249 56.18 0 2074588..2077971 + 1127 145592515 - Pars_2321 - DNA-directed RNA polymerase subunit beta 2250 54.58 0 2078001..2080655 + 884 145592516 - Pars_2322 - DNA-directed RNA polymerase subunit alpha 2251 51.49 0 2080652..2081791 + 379 145592517 - Pars_2323 - DNA-directed RNA polymerase subunit A'' 2252 49.84 0 2081831..2082145 + 104 145592518 - Pars_2324 - ribosomal protein L7Ae/L30e/S12e/Gadd45 2253 46.67 -1 2082138..2082572 + 144 145592519 - Pars_2325 - transcription elongation factor NusA-like protein 2254 49.32 -1 2083006..2083449 + 147 145592520 rps12P Pars_2326 - 30S ribosomal protein S12P 2255 48.72 -1 2083449..2084228 + 259 145592521 - Pars_2327 - RNA polymerase, insert 2256 49.05 -1 2084262..2084630 + 122 145592522 - Pars_2328 - 50S ribosomal protein L18e 2257 49.73 0 2084627..2085187 + 186 145592523 - Pars_2329 - ribosomal protein L13 2258 50.80 0 2085190..2085624 + 144 145592524 rps9p Pars_2330 - 30S ribosomal protein S9P 2259 50.51 0 2085621..2085818 + 65 145592525 - Pars_2331 - DNA-directed RNA polymerase subunit N 2260 47.89 -1 2085863..2086123 + 86 145592526 - Pars_2332 - like-Sm ribonucleoprotein, core 2261 52.06 0 2086120..2087331 + 403 145592527 - Pars_2333 - S-adenosylmethionine synthetase 2262 51.99 0 2087323..2089080 - 585 145592528 - Pars_2334 - hypothetical protein 2263 53.20 0 2089083..2090003 - 306 145592529 - Pars_2335 - protein of unknown function RIO1 2264 52.78 0 2090032..2090535 + 167 145592530 - Pars_2336 - hypothetical protein 2265 46.86 -1 2090643..2091359 + 238 145592531 - Pars_2337 - cytidyltransferase-like protein 2266 55.66 0 2091359..2092003 + 214 145592532 - Pars_2338 - endonuclease V 2267 53.75 0 2091968..2092354 - 128 145592533 - Pars_2339 - UspA domain-containing protein 2268 51.23 0 2092384..2093199 - 271 145592534 - Pars_2340 - binding-protein-dependent transport systems inner membrane component 2269 43.03 -2 2093187..2094011 - 274 145592535 - Pars_2341 - binding-protein-dependent transport systems inner membrane component 2270 55.02 0 2094008..2095441 - 477 145592536 - Pars_2342 - extracellular solute-binding protein 2271 55.56 0 2095998..2096195 + 65 145592537 - Pars_2344 - hypothetical protein 2272 42.65 -2 2096236..2096514 + 92 145592538 - Pars_2345 - elongation factor 1, beta/beta'/delta chain 2273 52.91 0 2096549..2098744 + 731 145592539 - Pars_2346 - AAA family ATPase, CDC48 subfamily protein 2274 36.49 -2 2098741..2098962 + 73 145592540 - Pars_2347 - hypothetical protein 2275 51.49 0 2098994..2100034 + 346 145592541 - Pars_2348 - flap endonuclease-1 2276 51.29 0 2100036..2100653 + 205 145592542 - Pars_2349 - protein-L-isoaspartate O-methyltransferase 2277 51.28 0 2100654..2101940 - 428 145592543 aspC Pars_2350 - aspartyl-tRNA synthetase 2278 48.28 -1 2101968..2102489 - 173 145592544 - Pars_2351 - transcription elongation factor NusA-like protein 2279 54.89 0 2102536..2104233 + 565 145592545 - Pars_2352 - radical SAM domain-containing protein 2280 48.21 -1 2104257..2104451 - 64 145592546 - Pars_2353 - hypothetical protein 2281 57.26 0 2104480..2104830 - 116 145592547 - Pars_2354 - peptidyl-tRNA hydrolase 2282 54.81 0 2104907..2108683 + 1258 145592548 - Pars_2355 - peptidase S8 and S53, subtilisin, kexin, sedolisin 2283 47.16 -1 2108676..2109080 - 134 145592549 - Pars_2356 - NUDIX hydrolase 2284 47.67 -1 2109147..2109746 - 199 145592550 - Pars_2357 - hypothetical protein 2285 52.23 0 2109853..2111598 + 581 145592551 sdhA Pars_2358 - succinate dehydrogenase flavoprotein subunit 2286 46.64 -1 2111600..2112313 + 237 145592552 sdhB Pars_2359 - succinate dehydrogenase iron-sulfur subunit 2287 41.72 -2 2112360..2112788 + 142 145592553 - Pars_2360 - hypothetical protein 2288 45.83 -1 2112785..2113120 + 111 145592554 - Pars_2361 - succinate dehydrogenase subunit D 2289 47.47 -1 2113339..2114109 - 256 145592555 - Pars_2362 - proliferating cell nuclear antigen 2290 48.33 -1 2114172..2114411 - 79 145592556 - Pars_2363 - hypothetical protein 2291 51.14 0 2114444..2114662 - 72 145592557 - Pars_2364 - regulatory protein, ArsR 2292 47.57 -1 2114777..2115064 - 95 145592558 - Pars_2365 - hypothetical protein 2293 51.48 0 2115295..2116071 - 258 145592559 - Pars_2366 - putative circadian clock protein, KaiC 2294 49.21 -1 2116073..2116513 + 146 145592560 - Pars_2367 - hypothetical protein 2295 47.60 -1 2116679..2117365 - 228 145592561 - Pars_2368 - MoaD family protein 2296 50.35 0 2117561..2118835 + 424 145592562 - Pars_2369 - FAD dependent oxidoreductase 2297 47.08 -1 2118832..2119122 + 96 145592563 - Pars_2370 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2298 50.57 0 2119125..2119919 + 264 145592564 - Pars_2371 - electron transfer flavoprotein beta-subunit 2299 54.47 0 2119922..2120962 + 346 145592565 - Pars_2372 - electron transfer flavoprotein, alpha subunit 55.13 MEAN 5.40 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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