version 1.0
Pyrobaculum aerophilum str. IM2, complete genome - 1..2222430 2605 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 448 44.06 -1 368019..368801 + 260 18312091 - PAE0671 - DNA-directed RNA polymerase subunit D (rpoD) 449 47.70 0 368827..369195 + 122 18312092 - PAE0672 - 50S ribosomal protein L18e 450 46.99 0 369192..369755 + 187 18312093 - PAE0673 - ribosomal protein L13 451 50.11 0 369758..370198 + 146 18312094 rps9p PAE0674 - 30S ribosomal protein S9P 452 49.25 0 370195..370395 + 66 18312095 - PAE0675a - DNA-directed RNA polymerase subunit N 453 46.51 0 370446..370703 + 85 18312096 - PAE0676 - small nuclear ribonucleoprotein homolog (Sm-like) 454 45.49 -1 370700..371908 + 402 18312097 - PAE0677 - S-adenosylmethionine synthetase 455 46.03 -1 371905..373668 - 587 18312098 - PAE0678 - hypothetical protein 456 45.28 -1 373672..374592 - 306 18312099 - PAE0680 - hypothetical protein 457 52.98 0 374624..375127 + 167 18312100 - PAE0681 - hypothetical protein 458 44.40 -1 375280..375966 + 228 18312101 - PAE0683 - cytidyltransferase 459 52.01 0 375947..376594 + 215 18312102 - PAE0684 - DNA endonuclease V, conjectural 460 50.75 0 376559..376960 - 133 18312103 - PAE0685 - hypothetical protein 461 49.00 0 376969..377772 - 267 18312104 - PAE0686 - multiple sugar transport permease protein 462 37.09 -2 377769..378593 - 274 18312105 - PAE0688 - multiple sugar transport permease protein 463 50.74 0 378590..380002 - 470 18312106 - PAE0689 - multiple sugar binding protein 464 58.33 +1 380353..380580 - 75 18312107 - PAE0692 - hypothetical protein 465 55.56 0 381568..381765 + 65 18312108 - PAE0694 - hypothetical protein 466 44.80 -1 381814..382092 + 92 18312109 - PAE0695 - translation elongation factor aEF-1 beta subunit 467 51.18 0 382129..384324 + 731 18312110 - PAE0696 - AAA family ATPase, CDC48 subfamily protein 468 42.79 -1 384321..384542 + 73 18312111 - PAE0697 - hypothetical protein 469 50.24 0 384568..385608 + 346 18312112 - PAE0698 - flap endonuclease-1 470 42.86 -1 385708..385875 + 55 18312113 - PAE0700 - hypothetical protein 471 51.29 0 385857..386474 + 205 18312114 - PAE0701 - protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 472 44.71 -1 386523..386777 + 84 18312115 - PAE0702 - hypothetical protein 473 48.64 0 386774..388060 - 428 18312116 aspC PAE0703 - aspartyl-tRNA synthetase 474 45.40 -1 388089..388610 - 173 18312117 - PAE0705 - transcription elongation factor NusA-like protein 475 52.06 0 388666..390363 + 565 18312118 - PAE0707 - hypothetical protein 476 46.15 -1 390344..390538 - 64 18312119 - PAE0708 - hypothetical protein 477 58.13 +1 390568..390930 - 120 18312120 - PAE0710 - peptidyl-tRNA hydrolase 478 53.88 0 390998..394774 + 1258 18312121 - PAE0712 - surface layer-associated stable protease, conjectural 479 49.54 0 394771..395208 - 145 18312122 - PAE0714 - diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase (mutT/nudix family protein) 480 45.77 -1 395247..395849 - 200 18312123 - PAE0715 - hypothetical protein 481 49.20 0 395970..397715 + 581 18312124 sdhA PAE0716 - succinate dehydrogenase flavoprotein subunit 482 46.78 0 397717..398430 + 237 18312125 sdhB PAE0717 - succinate dehydrogenase iron-sulfur subunit 483 48.46 0 398427..398849 + 140 18312126 - PAE0718 - succinate dehydrogenase cytochrome b subunit (sdhC) 484 47.62 0 398840..399196 + 118 18312127 - PAE0719 - succinate dehydrogenase subunit D (sdhD) 485 45.40 -1 399274..400044 - 256 18312128 - PAE0720 - proliferating-cell nuclear antigen homolog (PCNA) 486 51.20 0 400138..401178 - 346 18312129 - PAE0721 - electron transfer flavoprotein alpha subunit (etfA) 487 50.31 0 401182..401976 - 264 18312130 - PAE0722 - electron transfer flavoprotein beta subunit (etfB) 488 44.67 -1 401981..402271 - 96 18312131 - PAE0723 - ferredoxin like protein 489 49.73 0 402268..403542 - 424 18312132 - PAE0725 - electron transfer flavoprotein-quinone oxidoreductase 490 47.10 0 403769..404458 + 229 18312133 - PAE0727 - molybdenum cofactor biosynthesis protein D/E 491 45.99 -1 404439..404825 - 128 18312134 - PAE0728 - hypothetical protein 492 46.98 0 404887..405663 + 258 18312135 - PAE0729 - hypothetical protein 493 49.60 0 405821..406195 + 124 18312136 - PAE0730 - hypothetical protein 494 41.35 -2 406222..406458 + 78 18312137 - PAE0731 - transcriptional regulatory protein, conjectural 495 45.59 -1 406526..406729 + 67 18312138 - PAE0732 - hypothetical protein 496 48.07 0 406763..407434 + 223 18312139 - PAE0733 - 30S ribosomal protein S7P 497 48.59 0 407465..408454 + 329 18312140 rfc PAE0734 - replication factor C small subunit 498 46.34 -1 408454..409722 + 422 18312141 - PAE0735 - replication factor C large subunit 499 26.26 -2 409722..410018 + 98 18312142 - PAE0736 - hypothetical protein 500 45.98 -1 410093..411262 + 389 18312143 cdc6 PAE0737 - cell division control protein 6 501 48.30 0 411259..411552 + 97 18312144 - PAE0738 - transcriptional regulatory protein (helix-turn-helix), putative 502 46.82 0 411569..412102 + 177 18312145 - PAE0739 - hypothetical protein 503 48.50 0 412177..413277 + 366 18312146 - PAE0741 - translation initiation factor IF-2B subunit alpha 504 41.19 -2 413383..413700 + 105 18312147 - PAE0742 - hypothetical protein 505 47.54 0 413700..414839 + 379 18312148 - PAE0743 - RNA binding protein 506 36.84 -2 414823..415050 - 75 18312149 - PAE0744 - hypothetical protein 507 48.29 0 415095..415736 + 213 18312150 - PAE0745 - hypothetical protein 508 45.38 -1 415842..416306 - 154 18312151 - PAE0746 - hypothetical protein 509 44.44 -1 416445..416615 - 56 18312152 - PAE0748 - hypothetical protein 510 44.52 -1 416680..417966 - 428 18312153 - PAE0749 - hypothetical protein 511 47.02 0 417963..418751 - 262 18312154 - PAE0750 - hypothetical protein 512 37.42 -2 419345..419662 + 105 18312155 - PAE0752 - hypothetical protein 513 41.50 -1 419659..420687 + 342 18312156 - PAE0753 - H+-transporting ATP synthase subunit C (atpC) 514 51.89 0 420689..420952 - 87 18312157 - PAE0754 - H+-transporting ATP synthase subunit C (atpC) 515 30.67 -2 420967..421116 - 49 18312158 - PAE0756 - hypothetical protein 516 46.33 -1 421335..421934 - 199 18312159 - PAE0758 - H+-transporting ATP synthase subunit D (atpD) 517 50.97 0 421982..422758 + 258 18312160 - PAE0759 - GTP binding protein, conjectural 518 41.19 -2 422781..423251 + 156 18312161 - PAE0760 - hypothetical protein 519 46.67 0 423353..423907 - 184 18312162 - PAE0762 - hypothetical protein 520 46.20 -1 424026..425432 + 468 18312163 - PAE0763 - hypothetical protein 521 46.20 -1 425414..426703 - 429 18312164 - PAE0764 - phosphomannomutase (pmm) 522 48.84 0 426817..427932 + 371 18312165 - PAE0766 - hypothetical protein 523 46.17 -1 427934..428533 - 199 18312166 - PAE0768 - orotidine-5'-monophosphate decarboxylase (pyrF) 524 45.53 -1 428575..429492 + 305 18312167 pyrB PAE0770 - aspartate carbamoyltransferase catalytic subunit 525 46.70 0 429489..430019 + 176 18312168 - PAE0771 - N-acyltransferase 526 49.15 0 430063..431592 + 509 18312169 - PAE0772 - hypothetical protein 527 50.17 0 431596..433080 + 494 18312170 - PAE0773 - hypothetical protein 528 49.90 0 433267..433779 + 170 18312171 - PAE0776 - hypothetical protein 529 46.98 0 433813..435300 + 495 18312172 - PAE0777 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase 530 50.63 0 435361..436077 - 238 18312173 - PAE0779 - hypothetical protein 531 44.25 -1 436074..436586 - 170 18312174 - PAE0781 - hypothetical protein 532 46.77 0 436657..437817 - 386 18312175 - PAE0782 - hypothetical protein 533 50.21 0 437807..438292 - 161 18312176 - PAE0783 - helix-turn-helix protein 534 48.98 0 438301..438792 + 163 18312177 - PAE0786 - hypothetical protein 535 42.27 -1 439023..439313 - 96 18312178 - PAE0789 - hypothetical protein 536 43.62 -1 439522..439764 + 80 18312179 - PAE0790 - small nuclear ribonucleoprotein homolog (Sm-like) 537 47.10 0 439982..440584 + 200 18312180 - PAE0791 - hypothetical protein 538 48.92 0 440597..441520 + 307 18312181 - PAE0793 - hypothetical protein 539 46.88 0 441514..441897 - 127 18312182 - PAE0794 - cytidine deaminase 540 43.45 -1 441935..442873 + 312 18312183 - PAE0796 - hypothetical protein 541 48.53 0 442904..443686 + 260 18312184 - PAE0797 - short chain dehydrogenase 542 46.09 -1 443675..444967 - 430 18312185 glyA PAE0798 - serine hydroxymethyltransferase 543 47.21 0 444998..445732 - 244 18312186 - PAE0799 - molybdenum cofactor biosynthesis protein (moaC) 544 39.70 -2 445729..446058 - 109 18312187 - PAE0800 - hypothetical protein 545 52.79 0 446088..447146 - 352 18312188 - PAE0801 - isopentenyl pyrophosphate isomerase 546 54.25 0 447146..447886 - 246 18312189 rpl2p PAE0803 - 50S ribosomal protein L2P 547 45.83 -1 448017..448232 + 71 18312190 rps17E PAE0804 - 30S ribosomal protein S17e 51.51 MEAN 5.01 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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