version 1.0
Pyrobaculum aerophilum str. IM2, complete genome - 1..2222430 2605 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1308 56.06 0 1118721..1119116 + 131 18312951 - PAE1895 - hypothetical protein 1309 54.47 0 1119201..1119815 + 204 18312952 - PAE1897 - hypothetical protein 1310 57.47 +1 1120067..1120240 + 57 18312953 - PAE1899 - hypothetical protein 1311 58.75 +1 1120327..1121412 + 361 18312954 - PAE1900 - paREP2b 1312 61.25 +1 1121422..1121901 - 159 18312955 - PAE1901 - paREP8 1313 51.54 0 1121999..1122388 + 129 18312956 - PAE1902 - hypothetical protein 1314 58.48 +1 1122364..1122705 + 113 18312957 - PAE1903 - hypothetical protein 1315 54.79 0 1122765..1123244 - 159 18312958 - PAE1905 - hypothetical protein 1316 51.31 0 1123244..1123510 - 88 18312959 - PAE1906 - hypothetical protein 1317 51.69 0 1123555..1123761 - 68 18312960 - PAE1907 - hypothetical protein 1318 52.54 0 1123808..1124260 + 150 18312961 - PAE1909 - hypothetical protein 1319 54.61 0 1124285..1124956 + 223 18312962 - PAE1910 - hypothetical protein 1320 57.45 +1 1124995..1126101 - 368 18312963 - PAE1912 - chorismate synthase 1321 55.89 0 1126098..1126886 - 262 18312964 - PAE1913 - shikimate 5-dehydrogenase (aroE) 1322 48.75 0 1127000..1127557 + 185 18312965 - PAE1915 - hypothetical protein 1323 52.62 0 1127679..1128632 + 317 18312966 - PAE1916 - hypothetical protein 1324 54.39 0 1128676..1129392 + 238 18312967 - PAE1917 - pyrroline-5-carboxylate reductase 1325 54.01 0 1129375..1129785 - 136 18312968 - PAE1918 - mutT/nudix family protein 1326 51.52 0 1129833..1130948 + 371 18312969 - PAE1920 - phoH like protein 1327 54.38 0 1130976..1131968 + 330 18312970 - PAE1921 - putative alcohol dehydrogenase 1328 49.74 0 1132026..1132970 - 314 18312971 - PAE1922 - UDP-glucose 4-epimerase (galE-1) 1329 55.11 0 1133000..1134202 - 400 18312972 - PAE1924 - 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) 1330 55.59 0 1134174..1135211 - 345 18312973 aroB PAE1926 - 3-dehydroquinate synthase 1331 55.45 0 1135208..1136152 - 314 18312974 - PAE1927 - transketolase (C terminal section) 1332 55.72 0 1136146..1136949 - 267 18312975 - PAE1929 - transketolase (N terminal section) 1333 53.94 0 1137050..1138000 + 316 18312976 - PAE1931 - tyrosyl-tRNA synthetase 1334 54.10 0 1138021..1139007 + 328 161485621 - PAE1932 - 3-deoxy-7-phosphoheptulonate synthase 1335 56.79 +1 1139004..1139570 - 188 18312978 - PAE1934 - hypothetical protein 1336 55.57 0 1139552..1141723 - 723 18312979 - PAE1935 - carbon monoxide dehydrogenase large subunit, conjectural 1337 51.35 0 1141720..1142163 - 147 18312980 - PAE1936 - carbon monoxide dehydrogenase small subunit, conjectural 1338 59.46 +1 1142160..1142978 - 272 18312981 - PAE1939 - carbon monoxide dehydrogenase medium subunit, conjectural 1339 57.85 +1 1143009..1143791 - 260 18312982 - PAE1941 - chorismate mutase, conjectural 1340 52.06 0 1143859..1144392 - 177 18312983 - PAE1943 - paREP5 1341 60.40 +1 1144439..1144933 - 164 18312984 - PAE1944 - hypothetical protein 1342 54.29 0 1144930..1147167 - 745 18312985 - PAE1946 - hypothetical protein 1343 60.12 +1 1147164..1147835 - 223 18312986 - PAE1948 - hypothetical protein 1344 56.59 +1 1147898..1148155 - 85 18312987 - PAE1949 - paREP11 1345 52.84 0 1148269..1148673 - 134 18312988 - PAE1951 - hypothetical protein 1346 58.95 +1 1148686..1149048 - 120 18312989 - PAE1954 - hypothetical protein 1347 57.21 +1 1149050..1149451 - 133 18312990 - PAE1955 - hypothetical protein 1348 57.38 +1 1149483..1150721 - 412 18312991 - PAE1956 - hypothetical protein 1349 48.28 0 1150721..1151329 - 202 18312992 - PAE1957 - hypothetical protein 1350 56.08 0 1151396..1151905 + 169 18312993 - PAE1958 - hypothetical protein 1351 59.71 +1 1151969..1152874 - 301 18312994 - PAE1960 - 3-dehydroquinate dehydratase/chorismate mutase 1352 56.83 +1 1152886..1153749 - 287 18312995 - PAE1962 - hypothetical protein 1353 58.71 +1 1153763..1154755 + 330 18312996 - PAE1964 - aspartate aminotransferase (aspC), conjectural 1354 53.85 0 1154773..1154850 - 25 18312997 - PAE1966a - hypothetical protein 1355 56.74 +1 1155217..1156032 + 271 18312998 - PAE1967 - shikimate kinase 1356 54.50 0 1156011..1158065 - 684 18312999 - PAE1968 - alpha-glucosidase 1357 49.68 0 1158084..1158395 - 103 18313000 - PAE1969 - hypothetical protein 1358 53.98 0 1158466..1159482 + 338 18313001 rpl3p PAE1970 - 50S ribosomal protein L3P 1359 54.11 0 1159502..1160353 + 283 18313002 rpl4lp PAE1971 - 50S ribosomal protein L4P 1360 42.68 -1 1160350..1160595 + 81 18313003 - PAE1972 - ribosomal protein L23 1361 51.24 0 1161311..1161673 - 120 18313004 - PAE1974 - hypothetical protein 1362 54.75 0 1161704..1162240 - 178 18313005 - PAE1975 - hypothetical protein 1363 51.74 0 1162297..1162899 + 200 18313006 - PAE1976 - hypothetical protein 1364 41.94 -1 1163002..1163280 + 92 18313007 - PAE1978 - DNA-directed RNA polymerase subunit L (rpoL) 1365 55.11 0 1163277..1163942 + 221 18313008 - PAE1979 - ribosome biogenesis protein 1366 49.33 0 1163939..1164688 + 249 18313009 - PAE1981 - hypothetical protein 1367 43.43 -1 1164729..1165253 + 174 18313010 - PAE1982 - aerolysin, part 1, authentic frameshift 1368 55.04 0 1165246..1165890 + 214 18313011 - PAE1983 - aerolysin, part 2, authentic frameshift 1369 54.49 0 1165919..1167166 + 415 18313012 - PAE1984 - 3-isopropylmalate dehydratase large subunit 1370 53.05 0 1167176..1168093 - 305 18313013 - PAE1985 - ornithine carbamoyltransferase 1371 48.43 0 1168139..1169476 - 445 18313014 - PAE1986 - 2-isopropylmalate synthase 1372 54.08 0 1169631..1171418 + 595 18313015 - PAE1989 - hypothetical protein 1373 47.65 0 1171408..1171875 + 155 18313016 - PAE1990 - archaemetzincin-like protein 1374 53.09 0 1171858..1172343 - 161 18313017 leuD PAE1991 - 3-isopropylmalate dehydratase small subunit 1375 51.23 0 1172492..1173586 + 364 18313018 - PAE1993 - trans-homoaconitate synthase 1376 52.12 0 1173680..1174552 + 290 18313019 - PAE1995 - 3-isopropylmalate dehydrogenase (leuB) 1377 53.12 0 1174606..1175853 + 415 18313020 - PAE1996 - glutamate dehydrogenase 1378 43.00 -1 1175850..1176056 - 68 18313021 - PAE1998 - hypothetical protein 1379 45.55 -1 1176079..1176471 - 130 18313022 - PAE1999 - hypothetical protein 1380 48.26 0 1176530..1177219 + 229 18313023 - PAE2000 - glutamine transport system permease protein, putative 1381 50.34 0 1177222..1177956 + 244 18313024 - PAE2001 - glutamine transport ATP-binding 1382 54.78 0 1177979..1179838 + 619 18313025 - PAE2002 - molybdopterin oxidoreductase 1383 51.63 0 1179866..1180570 + 234 18313026 - PAE2003 - hypothetical protein 1384 56.31 0 1180558..1181397 + 279 18313027 - PAE2004 - serine/threonine specific protein phosphatase 1385 51.86 0 1181623..1183776 + 717 18313028 - PAE2005 - hypothetical protein 1386 49.21 0 1183777..1184349 + 190 18313029 - PAE2006 - hypothetical protein 1387 52.17 0 1184387..1184917 - 176 18313030 dcd PAE2008 - deoxycytidine triphosphate deaminase 1388 53.06 0 1185010..1185516 + 168 18313031 - PAE2010 - hypothetical protein 1389 53.48 0 1185513..1185785 - 90 18313032 - PAE2011 - hypothetical protein 1390 54.59 0 1185828..1186274 + 148 18313033 - PAE2012 - methylated-DNA--[protein]-cysteine S-methyltransferase (ogt) 1391 54.82 0 1186311..1186538 + 75 18313034 - PAE2013 - ferredoxin 1392 47.78 0 1186735..1186914 + 59 18313035 - PAE2015 - hypothetical protein 1393 52.23 0 1186946..1187596 + 216 18313036 - PAE2017 - phosphoserine phosphatase (serB) 1394 48.10 0 1187678..1188571 + 297 18313037 - PAE2019 - hypothetical protein 1395 52.62 0 1188556..1189260 + 234 18313038 - PAE2020 - hypothetical protein 1396 51.85 0 1189498..1189956 - 152 18313039 - PAE2021 - riboflavin synthase 1397 50.41 0 1190002..1190370 + 122 18313040 - PAE2022 - CopG family protein 1398 55.56 0 1190373..1190741 + 122 18313041 - PAE2024 - hypothetical protein 1399 55.66 0 1190738..1191709 + 323 18313042 - PAE2025 - xaa-Pro dipeptidase, putative 1400 64.29 +2 1191710..1192045 - 111 18313043 - PAE2027 - paREP10, authentic frameshift 1401 54.35 0 1192251..1193801 - 516 18313044 - PAE2028 - N-methylhydantoinase B (hyuB) 1402 57.00 +1 1193798..1195741 - 647 18313045 - PAE2030 - N-methylhydantoinase A (hyuA) 1403 39.14 -2 1195907..1196233 + 108 18313046 - PAE2031 - hypothetical protein 1404 47.06 0 1196417..1196824 - 135 18313047 - PAE2032 - paREP11 1405 52.92 0 1196978..1197217 - 79 18313048 - PAE2034 - hypothetical protein 1406 53.93 0 1197484..1198818 + 444 18313049 - PAE2035 - D-lactate dehydrogenase 1407 58.54 +1 1198796..1199275 - 159 18313050 - PAE2037 - hypothetical protein 51.51 MEAN 5.01 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0