version 1.0
Pseudomonas syringae pv. syringae B728a, complete genome - 1..6093698 5089 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 858 64.71 +1 997015..997779 + 254 66044130 - Psyr_0875 - TonB, C-terminal 859 58.30 0 997800..1000082 + 760 66044131 - Psyr_0876 - TonB-dependent receptor:TonB-dependent receptor, C-terminal 860 58.83 0 1000107..1000757 + 216 66044132 - Psyr_0877 - MotA/TolQ/ExbB proton channel 861 61.35 0 1000822..1002063 + 413 66044133 - Psyr_0878 - phospholipase D/transphosphatidylase 862 52.26 -1 1002118..1002603 + 161 66044134 - Psyr_0879 - GCN5-related N-acetyltransferase 863 63.37 0 1002854..1004065 + 403 66044135 - Psyr_0880 - MltA:3D 864 55.20 0 1004371..1004649 + 92 66044136 - Psyr_0881 - hypothetical protein 865 46.59 -2 1004748..1005011 - 87 66044137 - Psyr_0882 - hypothetical protein 866 53.12 -1 1005013..1007049 - 678 66044138 - Psyr_0883 - S-type Pyocin 867 62.99 0 1007353..1007814 - 153 66044139 - Psyr_0884 - hypothetical protein 868 64.67 +1 1007811..1008260 - 149 66044140 - Psyr_0885 - hypothetical protein 869 59.40 0 1008526..1009530 + 334 66044141 - Psyr_0886 - response regulator receiver 870 55.28 0 1009534..1010016 + 160 66044142 - Psyr_0887 - sensory box protein 871 64.76 +1 1010113..1011369 + 418 66044143 - Psyr_0888 - 3-phosphoshikimate 1-carboxyvinyltransferase 872 49.41 -2 1011517..1011771 + 84 66044144 - Psyr_0889 - SpoVT/AbrB-like 873 53.16 -1 1011768..1012115 + 115 66044145 - Psyr_0890 - toxin ChpB 874 61.69 0 1012163..1012825 - 220 66044146 - Psyr_0891 - transcriptional activator ChrR 875 58.29 0 1012825..1013433 - 202 66044147 - Psyr_0892 - RNA polymerase sigma factor RpoE 876 52.78 -1 1013760..1014335 + 191 66044148 - Psyr_0893 - hypothetical protein 877 54.07 -1 1014523..1014927 - 134 66044149 - Psyr_0894 - PilT protein, N-terminal 878 54.55 -1 1014927..1015157 - 76 66044150 - Psyr_0895 - SpoVT/AbrB-like 879 65.99 +1 1015273..1016154 - 293 66044151 - Psyr_0896 - aldose 1-epimerase 880 64.61 +1 1016129..1017100 - 323 66044152 - Psyr_0897 - hypothetical protein 881 60.97 0 1017185..1018465 - 426 66044153 - Psyr_0898 - TRAP dicarboxylate transporter, DctM subunit 882 58.14 0 1018466..1018993 - 175 66044154 - Psyr_0899 - tripartite ATP-independent periplasmic transporter DctQ 883 57.89 0 1019056..1020081 - 341 66044155 - Psyr_0900 - TRAP dicarboxylate transporter- DctP subunit 884 63.84 +1 1020139..1021023 - 294 66044156 - Psyr_0901 - senescence marker protein-30 (SMP-30) 885 60.63 0 1021066..1021893 - 275 66044157 - Psyr_0902 - hypothetical protein 886 60.60 0 1022073..1023341 - 422 66044158 - Psyr_0903 - outer membrane porin 887 62.22 0 1023841..1024605 + 254 66044159 - Psyr_0904 - Short-chain dehydrogenase/reductase SDR 888 59.75 0 1024669..1026591 - 640 66044160 - Psyr_0905 - histidine kinase, HAMP region: chemotaxis sensory transducer 889 58.27 0 1026969..1028849 + 626 66044161 - Psyr_0906 - histidine kinase, HAMP region:Cache: chemotaxis sensory transducer 890 53.03 -1 1029008..1029271 - 87 66044162 - Psyr_0907 - hypothetical protein 891 58.88 0 1029403..1030545 - 380 66044163 lldD Psyr_0908 - L-lactate dehydrogenase 892 59.64 0 1030676..1031572 + 298 66044164 - Psyr_0909 - regulatory protein, LysR:LysR, substrate-binding 893 53.83 -1 1032421..1033152 + 243 66044165 - Psyr_0910 - helix-turn-helix, AraC type 894 55.66 0 1033231..1034175 + 314 66044166 - Psyr_0911 - hypothetical protein 895 56.60 0 1034782..1035903 - 373 66044167 - Psyr_0912 - DnaJ domain-containing protein 896 61.71 0 1036243..1038300 + 685 66044168 - Psyr_0913 - histidine kinase, HAMP region: chemotaxis sensory transducer 897 58.85 0 1038365..1039477 - 370 66044169 - Psyr_0914 - glycosyl transferase, group 1 898 61.32 0 1039593..1040489 - 298 66044170 - Psyr_0915 - NAD-dependent epimerase/dehydratase 899 56.20 0 1040489..1041520 - 343 66044171 - Psyr_0916 - GDP-mannose 4,6-dehydratase 900 54.21 -1 1042032..1042826 + 264 66044172 - Psyr_0917 - hypothetical protein 901 52.79 -1 1042823..1044040 + 405 66044173 - Psyr_0918 - ABC transporter 902 52.70 -1 1044037..1045977 + 646 66044174 - Psyr_0919 - chromosome segregation ATPase 903 52.84 -1 1045977..1048472 + 831 66044175 - Psyr_0920 - glycosyl transferase, group 1 904 46.42 -2 1048744..1049232 + 162 66044176 - Psyr_0921 - GtrA-like protein 905 52.40 -1 1049242..1050096 + 284 66044177 - Psyr_0922 - glycosyl transferase family protein 906 48.46 -2 1050093..1051553 + 486 66044178 - Psyr_0923 - hypothetical protein 907 59.30 0 1051663..1052544 - 293 66044179 - Psyr_0924 - glucose-1-phosphate thymidylyltransferase, long form 908 61.04 0 1052553..1053458 - 301 66044180 - Psyr_0925 - dTDP-4-dehydrorhamnose reductase 909 58.13 0 1053455..1054555 - 366 66044181 - Psyr_0926 - dTDP-glucose 4,6-dehydratase 910 40.16 -2 1054719..1055612 - 297 66044182 - Psyr_0927 - hypothetical protein 911 42.25 -2 1055655..1057292 - 545 66044183 - Psyr_0928 - hypothetical protein 912 59.72 0 1058769..1061159 - 796 66044184 - Psyr_0929 - glycosyl transferase family protein 913 60.14 0 1061156..1063639 - 827 66044185 - Psyr_0930 - glycosyl transferase family protein 914 57.53 0 1063750..1065204 - 484 66044186 - Psyr_0931 - hemolysin-type calcium-binding region 915 58.28 0 1065222..1066103 - 293 66044187 - Psyr_0932 - hypothetical protein 916 55.61 0 1066836..1068590 + 584 66044188 - Psyr_0933 - Type I secretion system ATPase, PrtD 917 55.56 0 1068604..1069926 + 440 66044189 - Psyr_0934 - Type I secretion membrane fusion protein, HlyD 918 60.00 0 1069923..1071332 + 469 66044190 - Psyr_0935 - Type I secretion outer membrane protein, TolC 919 57.79 0 1071372..1072520 - 382 66044191 - Psyr_0936 - glycosyl transferase, group 1 920 59.20 0 1072797..1074215 + 472 66044192 - Psyr_0937 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 921 46.45 -2 1074450..1075661 + 403 66044193 - Psyr_0938 - hypothetical protein 922 59.85 0 1076491..1077591 - 366 66044194 - Psyr_0941 - translation-associated GTPase 923 60.17 0 1077613..1078197 - 194 66044195 - Psyr_0942 - peptidyl-tRNA hydrolase 924 56.75 0 1078362..1078976 - 204 66044196 - Psyr_0943 - 50S ribosomal protein L25/general stress protein Ctc 925 55.73 0 1079101..1080042 - 313 66044197 - Psyr_0944 - ribose-phosphate pyrophosphokinase 926 54.30 -1 1080200..1081048 - 282 66044198 ipk Psyr_0945 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 927 62.78 0 1081051..1081668 - 205 66044199 lolB Psyr_0946 - outer membrane lipoprotein LolB 928 60.62 0 1081673..1083343 - 556 66044200 - Psyr_0947 - TPR repeat-containing protein 929 60.72 0 1083627..1084904 + 425 66044201 hemA Psyr_0948 - glutamyl-tRNA reductase 930 60.02 0 1084901..1085983 + 360 66044202 prfA Psyr_0949 - peptide chain release factor 1 931 63.67 +1 1085984..1086817 + 277 66044203 - Psyr_0950 - modification methylase HemK 932 60.90 0 1086802..1087581 + 259 66044204 - Psyr_0951 - molybdopterin biosynthesis protein MoeB 933 59.68 0 1087574..1088389 + 271 66044205 - Psyr_0952 - glutamate racemase 934 55.88 0 1088508..1089026 + 172 66044206 - Psyr_0953 - hypothetical protein 935 57.33 0 1089329..1089553 - 74 66044207 - Psyr_0954 - hypothetical protein 936 62.35 0 1089640..1090149 - 169 66044208 - Psyr_0955 - hypothetical protein 937 59.97 0 1090142..1091410 - 422 66044209 - Psyr_0956 - cyclopropane-fatty-acyl-phospholipid synthase 938 60.42 0 1091397..1092197 - 266 66044210 - Psyr_0957 - hypothetical protein 939 60.58 0 1092194..1093441 - 415 66044211 - Psyr_0958 - amine oxidase, flavin-containing 940 63.24 0 1093438..1094226 - 262 66044212 - Psyr_0959 - Short-chain dehydrogenase/reductase SDR 941 58.16 0 1094223..1094645 - 140 66044213 - Psyr_0960 - hypothetical protein 942 61.08 0 1094638..1096086 - 482 66044214 - Psyr_0961 - deoxyribodipyrimidine photolyase 943 62.13 0 1096096..1096998 - 300 66044215 - Psyr_0962 - regulatory protein, MerR 944 59.46 0 1097002..1097958 - 318 66044216 - Psyr_0963 - hypothetical protein 945 57.41 0 1098082..1098297 - 71 66044217 - Psyr_0964 - hypothetical protein 946 63.53 0 1098294..1099280 - 328 66044218 - Psyr_0965 - amine oxidase, flavin-containing 947 59.58 0 1099569..1100471 + 300 66044219 - Psyr_0966 - hypothetical protein 948 59.73 0 1100499..1101521 + 340 66044220 hemH Psyr_0967 - ferrochelatase 949 61.35 0 1101699..1102976 - 425 66044221 - Psyr_0968 - xanthine/uracil permease family protein 950 61.50 0 1102981..1103619 - 212 66044222 upp Psyr_0969 - uracil phosphoribosyltransferase 951 58.96 0 1103827..1104384 + 185 66044223 - Psyr_0970 - hypoxanthine-guanine phosphoribosyltransferase 952 60.32 0 1104451..1104954 + 167 66044224 - Psyr_0971 - hypothetical protein 953 51.39 -1 1105021..1105308 + 95 66044225 - Psyr_0972 - hypothetical protein 954 60.74 0 1105608..1106450 - 280 66044226 - Psyr_0973 - amino acid ABC transporter permease 955 58.76 0 1106447..1107268 - 273 66044227 - Psyr_0974 - extracellular solute-binding protein 956 62.06 0 1107343..1108275 + 310 66044228 - Psyr_0975 - homocysteine S-methyltransferase 957 60.70 0 1108361..1109869 - 502 66044229 - Psyr_0976 - malate:quinone oxidoreductase 59.35 MEAN 4.19 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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